RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.38□□□□□ -0.27
TPM1-209ENST00000558072 H0YGN5 161 aa13.38□□□□□ -0.27
TPM1-209ENST00000558072 TRIM49P0CI25 452 aa13.38□□□□□ -0.27
TPM1-209ENST00000558072 TRIM49CP0CI26 452 aa13.38□□□□□ -0.27
TPM1-209ENST00000558072 TBXAS1P24557 533 aaPredicted RBP13.38□□□□□ -0.27
TPM1-209ENST00000558072 RPL9P32969 192 aaKnown RBP13.38□□□□□ -0.27
TPM1-209ENST00000558072 KCNJ6P48051 423 aa13.38□□□□□ -0.27
TPM1-209ENST00000558072 GATMP50440 423 aa13.38□□□□□ -0.27
TPM1-209ENST00000558072 YWHAEP62258 255 aaKnown RBP13.38□□□□□ -0.27
TPM1-209ENST00000558072 DEFB103AP81534 67 aa13.38□□□□□ -0.27
TPM1-209ENST00000558072 MYO1EQ12965 1108 aa13.38□□□□□ -0.27
TPM1-209ENST00000558072 GRIK3Q13003 919 aa13.38□□□□□ -0.27
TPM1-209ENST00000558072 SYCP1Q15431 976 aa13.38□□□□□ -0.27
TPM1-209ENST00000558072 JADE1Q6IE81 842 aa13.38□□□□□ -0.27
TPM1-209ENST00000558072 C15orf39Q6ZRI6 1047 aa13.38□□□□□ -0.27
TPM1-209ENST00000558072 TRAPPC11Q7Z392 1133 aa13.38□□□□□ -0.27
TPM1-209ENST00000558072 ZNF598Q86UK7 904 aaKnown RBP13.38□□□□□ -0.27
TPM1-209ENST00000558072 CNGA4Q8IV77 575 aa13.38□□□□□ -0.27
TPM1-209ENST00000558072 ZNF560Q96MR9 790 aa13.38□□□□□ -0.27
TPM1-209ENST00000558072 NT5C1BQ96P26 610 aa13.38□□□□□ -0.27
TPM1-209ENST00000558072 MYO6Q9UM54 1294 aa13.38□□□□□ -0.27
TPM1-209ENST00000558072 COL4A6Q14031 1691 aa13.37□□□□□ -0.27
TPM1-209ENST00000558072 CITO14578 2027 aa13.37□□□□□ -0.27
TPM1-209ENST00000558072 SMIM28A0A1B0GU29 152 aa13.37□□□□□ -0.27
TPM1-209ENST00000558072 A0A1W2PQJ5 194 aa13.37□□□□□ -0.27
TPM1-209ENST00000558072 MEFVO15553 781 aaPredicted RBP13.37□□□□□ -0.27
TPM1-209ENST00000558072 TEX33O43247 280 aa13.37□□□□□ -0.27
TPM1-209ENST00000558072 STAU1O95793 577 aaKnown RBP13.37□□□□□ -0.27
TPM1-209ENST00000558072 FGBP02675 491 aa13.37□□□□□ -0.27
TPM1-209ENST00000558072 AKAP5P24588 427 aa13.37□□□□□ -0.27
TPM1-209ENST00000558072 PBX1P40424 430 aa13.37□□□□□ -0.27
TPM1-209ENST00000558072 PIK3CAP42336 1068 aa13.37□□□□□ -0.27
TPM1-209ENST00000558072 MFAP3P55082 362 aa13.37□□□□□ -0.27
TPM1-209ENST00000558072 WNT7BP56706 349 aa13.37□□□□□ -0.27
TPM1-209ENST00000558072 DLG4P78352 724 aa13.37□□□□□ -0.27
TPM1-209ENST00000558072 PPP3CAQ08209 521 aa13.37□□□□□ -0.27
TPM1-209ENST00000558072 NCOA4Q13772 614 aa13.37□□□□□ -0.27
TPM1-209ENST00000558072 C9orf50Q5SZB4 431 aa13.37□□□□□ -0.27
TPM1-209ENST00000558072 ZNF365Q70YC5 407 aa13.37□□□□□ -0.27
TPM1-209ENST00000558072 OTOP2Q7RTS6 562 aa13.37□□□□□ -0.27
TPM1-209ENST00000558072 CACNA2D4Q7Z3S7 1137 aa13.37□□□□□ -0.27
TPM1-209ENST00000558072 LRRC52Q8N7C0 313 aa13.37□□□□□ -0.27
TPM1-209ENST00000558072 RNF169Q8NCN4 708 aa13.37□□□□□ -0.27
TPM1-209ENST00000558072 FAM193BQ96PV7 902 aaPredicted RBP13.37□□□□□ -0.27
TPM1-209ENST00000558072 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.37□□□□□ -0.27
TPM1-209ENST00000558072 RNF39Q9H2S5 420 aa13.37□□□□□ -0.27
TPM1-209ENST00000558072 DPP3Q9NY33 737 aa13.37□□□□□ -0.27
TPM1-209ENST00000558072 CXXC1Q9P0U4 656 aaPredicted RBP13.37□□□□□ -0.27
TPM1-209ENST00000558072 ARL5CA6NH57 179 aa13.36□□□□□ -0.27
TPM1-209ENST00000558072 PTMAP06454 111 aaKnown RBP13.36□□□□□ -0.27
TPM1-209ENST00000558072 FAM163BP0C2L3 166 aa13.36□□□□□ -0.27
TPM1-209ENST00000558072 PON1P27169 355 aa13.36□□□□□ -0.27
TPM1-209ENST00000558072 ZBTB6Q15916 424 aa13.36□□□□□ -0.27
TPM1-209ENST00000558072 CBWD6Q4V339 395 aa13.36□□□□□ -0.27
TPM1-209ENST00000558072 EPC2Q52LR7 807 aa13.36□□□□□ -0.27
TPM1-209ENST00000558072 NOMO2Q5JPE7 1267 aa13.36□□□□□ -0.27
TPM1-209ENST00000558072 CBWD3Q5JTY5 395 aa13.36□□□□□ -0.27
TPM1-209ENST00000558072 CBWD5Q5RIA9 395 aa13.36□□□□□ -0.27
TPM1-209ENST00000558072 C1orf220Q5T0J3 134 aa13.36□□□□□ -0.27
TPM1-209ENST00000558072 FAM117BQ6P1L5 589 aa13.36□□□□□ -0.27
TPM1-209ENST00000558072 AGMOQ6ZNB7 445 aa13.36□□□□□ -0.27
TPM1-209ENST00000558072 TMC6Q7Z403 805 aa13.36□□□□□ -0.27
TPM1-209ENST00000558072 PLEKHO2Q8TD55 490 aa13.36□□□□□ -0.27
TPM1-209ENST00000558072 POP1Q99575 1024 aaKnown RBP13.36□□□□□ -0.27
TPM1-209ENST00000558072 MTMR12Q9C0I1 747 aa13.36□□□□□ -0.27
TPM1-209ENST00000558072 INTS2Q9H0H0 1204 aaKnown RBP13.36□□□□□ -0.27
TPM1-209ENST00000558072 VRTNQ9H8Y1 702 aa13.36□□□□□ -0.27
TPM1-209ENST00000558072 ZNHIT6Q9NWK9 470 aaKnown RBP13.36□□□□□ -0.27
TPM1-209ENST00000558072 CEP72Q9P209 647 aa13.36□□□□□ -0.27
TPM1-209ENST00000558072 HCSTQ9UBK5 93 aa13.36□□□□□ -0.27
TPM1-209ENST00000558072 APEX2Q9UBZ4 518 aa13.36□□□□□ -0.27
TPM1-209ENST00000558072 SIK3Q9Y2K2 1263 aa13.36□□□□□ -0.27
TPM1-209ENST00000558072 LUC7L2Q9Y383 392 aaKnown RBP13.36□□□□□ -0.27
TPM1-209ENST00000558072 ANK1P16157 1881 aa13.36□□□□□ -0.27
TPM1-209ENST00000558072 TNRC18O15417 2968 aaPredicted RBP13.35□□□□□ -0.27
TPM1-209ENST00000558072 ZBBXA8MT70 800 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 AP5Z1O43299 807 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 OFD1O75665 1012 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 CLSTN1O94985 981 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 HLA-DRAP01903 254 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 NFICP08651 508 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 KRT19P08727 400 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 FGFR1P11362 822 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 LRPAP1P30533 357 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 MLH1P40692 756 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 AFF1P51825 1210 aaKnown RBP13.35□□□□□ -0.27
TPM1-209ENST00000558072 ZBED6P86452 979 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 GCNT1Q02742 428 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 RNASELQ05823 741 aaKnown RBP13.35□□□□□ -0.27
TPM1-209ENST00000558072 TUSC3Q13454 348 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 SV2CQ496J9 727 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 TMEM240Q5SV17 173 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 KLHDC7AQ5VTJ3 777 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 TDRD10Q5VZ19 366 aaKnown RBP13.35□□□□□ -0.27
TPM1-209ENST00000558072 TRIM65Q6PJ69 517 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 EFCAB13Q8IY85 973 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 PHOSPHO2Q8TCD6 241 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 ZNF516Q92618 1163 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 PDLIM2Q96JY6 352 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 PPP1R10Q96QC0 940 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms