RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 STK38Q15208 465 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 SLC39A4Q6P5W5 647 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 CCDC73Q6ZRK6 1079 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 SPATA31D4Q6ZUB0 917 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 SV2BQ7L1I2 683 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 DYMQ7RTS9 669 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 PALB2Q86YC2 1186 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 CMASQ8NFW8 434 aaPredicted RBP9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 HDAC7Q8WUI4 952 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 DDX12PQ92771 950 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 C18orf25Q96B23 403 aaPredicted RBP9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 BICD1Q96G01 975 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 DDX27Q96GQ7 796 aaKnown RBP9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 UROC1Q96N76 676 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 ZNF396Q96N95 335 aaPredicted RBP9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 STRA6Q9BX79 667 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 ST6GALNAC4Q9H4F1 302 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 SLC38A7Q9NVC3 462 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 RAPGEFL1Q9UHV5 662 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 WDFY4Q6ZS81 3184 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 SCN1AP35498 2009 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 NOTCH4Q99466 2003 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 A0A0B4J269 797 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 TTC26A0AVF1 554 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 C2CD4DB7Z1M9 353 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 I3L4J1 428 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 PODXLO00592 558 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 HNRNPDLO14979 420 aaKnown RBP9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 OGTO15294 1046 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 PPP6R2O75170 966 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 RFPL2O75678 378 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 PPP1R37O75864 691 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 YEATS4O95619 227 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 F13A1P00488 732 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 ADRB2P07550 413 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 CLTAP09496 248 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 CXCL8P10145 99 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 MYBP10242 640 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 PDIA4P13667 645 aaKnown RBP9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 FGFR3P22607 806 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 SP100P23497 879 aaPredicted RBP9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 RPL9P32969 192 aaKnown RBP9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 TXLNAP40222 546 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 TNFSF9P41273 254 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 MATR3P43243 847 aaKnown RBP eCLIP9.58□□□□□ -0.881e-7■■□□□ 11.4
SNRPA1-206ENST00000558059 BRCC3P46736 316 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 LIG4P49917 911 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 CREMQ03060 361 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 ZBTB6Q15916 424 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 PSMD5Q16401 504 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 ZC2HC1CQ53FD0 456 aaPredicted RBP9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 ZBTB41Q5SVQ8 909 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 AXDND1Q5T1B0 1012 aaPredicted RBP9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 C15orf39Q6ZRI6 1047 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 ZNF720Q7Z2F6 126 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 SFR1Q86XK3 245 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 CEP57Q86XR8 500 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 MAP4K3Q8IVH8 894 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 GLYCTKQ8IVS8 523 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 TMEM130Q8N3G9 435 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 SPRYD3Q8NCJ5 442 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 EDAQ92838 391 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 ZNF707Q96C28 371 aaPredicted RBP9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 RHOBTB2Q9BYZ6 727 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 PLEKHA4Q9H4M7 779 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 PLEKHA5Q9HAU0 1116 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 TSHZ2Q9NRE2 1034 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 NR2E1Q9Y466 385 aa9.58□□□□□ -0.88
SNRPA1-206ENST00000558059 CCDC195A0A1B0GUA6 201 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 FRMD3A2A2Y4 597 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 LACTBL1A8MY62 500 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 PRR33A8MZF0 331 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 TISP43B9A030 160 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 ANKRD63C9JTQ0 380 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 CUTAO60888 179 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 HSP90AA1P07900 732 aaKnown RBP9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 GAP43P17677 238 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 TKTP29401 623 aaKnown RBP9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 ABCD1P33897 745 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 STAT6P42226 847 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 ZXDAP98168 799 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 SPAG1Q07617 926 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 ENOX2Q16206 610 aaKnown RBP9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 E2F4Q16254 413 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 FOXD4L6Q3SYB3 417 aaPredicted RBP9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 PDXDC1Q6P996 788 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 SHC4Q6S5L8 630 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 RSPO2Q6UXX9 243 aaPredicted RBP9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 CYP26C1Q6V0L0 522 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 FOXD4L3Q6VB84 417 aaPredicted RBP9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 ZDHHC14Q8IZN3 488 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 PDILTQ8N807 584 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 KREMEN2Q8NCW0 462 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 IKZF4Q9H2S9 585 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 MTRRQ9UBK8 725 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 SEL1LQ9UBV2 794 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 TUBGCP4Q9UGJ1 667 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 DPP7Q9UHL4 492 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 USTQ9Y2C2 406 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms