RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 GUCY2FP51841 1108 aa27.67■■■□□ 2.02
SMAD6-202ENST00000557916 PMS1P54277 932 aaKnown RBP27.67■■■□□ 2.02
SMAD6-202ENST00000557916 TFAMQ00059 246 aaKnown RBP27.67■■■□□ 2.02
SMAD6-202ENST00000557916 LRRC63Q05C16 580 aa27.67■■■□□ 2.02
SMAD6-202ENST00000557916 CCDC183Q5T5S1 534 aa27.67■■■□□ 2.02
SMAD6-202ENST00000557916 TMEM130Q8N3G9 435 aa27.67■■■□□ 2.02
SMAD6-202ENST00000557916 HASPINQ8TF76 798 aa27.67■■■□□ 2.02
SMAD6-202ENST00000557916 VN1R3Q9BXE9 311 aa27.67■■■□□ 2.02
SMAD6-202ENST00000557916 STK39Q9UEW8 545 aa27.67■■■□□ 2.02
SMAD6-202ENST00000557916 PDCD11Q14690 1871 aaKnown RBP27.67■■■□□ 2.02
SMAD6-202ENST00000557916 PLXNA4Q9HCM2 1894 aa27.67■■■□□ 2.02
SMAD6-202ENST00000557916 TRIM49BA6NDI0 452 aa27.67■■■□□ 2.02
SMAD6-202ENST00000557916 ERVFC1P60507 584 aa27.67■■■□□ 2.02
SMAD6-202ENST00000557916 PSMD6Q15008 389 aa27.67■■■□□ 2.02
SMAD6-202ENST00000557916 RBM43Q6ZSC3 357 aaKnown RBP27.67■■■□□ 2.02
SMAD6-202ENST00000557916 VPS52Q8N1B4 723 aa27.67■■■□□ 2.02
SMAD6-202ENST00000557916 MICAL1Q8TDZ2 1067 aa27.67■■■□□ 2.02
SMAD6-202ENST00000557916 CACTINQ8WUQ7 758 aaKnown RBP27.67■■■□□ 2.02
SMAD6-202ENST00000557916 NELFBQ8WX92 580 aa27.67■■■□□ 2.02
SMAD6-202ENST00000557916 CCDC127Q96BQ5 260 aa27.67■■■□□ 2.02
SMAD6-202ENST00000557916 CTNND2Q9UQB3 1225 aa27.67■■■□□ 2.02
SMAD6-202ENST00000557916 ANK1P16157 1881 aa27.66■■■□□ 2.02
SMAD6-202ENST00000557916 TMEM189-UBE2V1I3L0A0 370 aa27.66■■■□□ 2.02
SMAD6-202ENST00000557916 CETN3O15182 167 aa27.66■■■□□ 2.02
SMAD6-202ENST00000557916 IGFBP6P24592 240 aaPredicted RBP27.66■■■□□ 2.02
SMAD6-202ENST00000557916 FUT10Q6P4F1 479 aa27.66■■■□□ 2.02
SMAD6-202ENST00000557916 TMC7Q7Z402 723 aa27.66■■■□□ 2.02
SMAD6-202ENST00000557916 C3orf58Q8NDZ4 430 aa27.66■■■□□ 2.02
SMAD6-202ENST00000557916 FNBP1Q96RU3 617 aa27.66■■■□□ 2.02
SMAD6-202ENST00000557916 DPP3Q9NY33 737 aa27.66■■■□□ 2.02
SMAD6-202ENST00000557916 AKAP3O75969 853 aa27.65■■■□□ 2.02
SMAD6-202ENST00000557916 EFEMP2O95967 443 aa27.65■■■□□ 2.02
SMAD6-202ENST00000557916 DLATP10515 647 aaKnown RBP27.65■■■□□ 2.02
SMAD6-202ENST00000557916 IRS1P35568 1242 aa27.65■■■□□ 2.02
SMAD6-202ENST00000557916 FKBP3Q00688 224 aaKnown RBP27.65■■■□□ 2.02
SMAD6-202ENST00000557916 LMBRD2Q68DH5 695 aaPredicted RBP27.65■■■□□ 2.02
SMAD6-202ENST00000557916 MLKLQ8NB16 471 aa27.65■■■□□ 2.02
SMAD6-202ENST00000557916 EEF2KMTQ96G04 330 aa27.65■■■□□ 2.02
SMAD6-202ENST00000557916 TCF25Q9BQ70 676 aa27.65■■■□□ 2.02
SMAD6-202ENST00000557916 GPR62Q9BZJ7 368 aa27.65■■■□□ 2.02
SMAD6-202ENST00000557916 ENTPD7Q9NQZ7 604 aa27.65■■■□□ 2.02
SMAD6-202ENST00000557916 TMEM63CQ9P1W3 806 aa27.65■■■□□ 2.02
SMAD6-202ENST00000557916 SF3B1O75533 1304 aaKnown RBP eCLIP27.65■■■□□ 2.028e-6■■■■■ 107
SMAD6-202ENST00000557916 BICDL2A1A5D9 508 aa27.64■■■□□ 2.02
SMAD6-202ENST00000557916 MAPK13O15264 365 aa27.64■■■□□ 2.02
SMAD6-202ENST00000557916 SOD2P04179 222 aa27.64■■■□□ 2.02
SMAD6-202ENST00000557916 TMEM191BP0C7N4 346 aa27.64■■■□□ 2.02
SMAD6-202ENST00000557916 PSMC2P35998 433 aaKnown RBP27.64■■■□□ 2.02
SMAD6-202ENST00000557916 NLRP12P59046 1061 aa27.64■■■□□ 2.02
SMAD6-202ENST00000557916 PAK1Q13153 545 aa27.64■■■□□ 2.02
SMAD6-202ENST00000557916 PDE12Q6L8Q7 609 aaKnown RBP27.64■■■□□ 2.02
SMAD6-202ENST00000557916 CD300LGQ6UXG3 332 aa27.64■■■□□ 2.02
SMAD6-202ENST00000557916 TAS1R1Q7RTX1 841 aa27.64■■■□□ 2.02
SMAD6-202ENST00000557916 WDR49Q8IV35 697 aa27.64■■■□□ 2.02
SMAD6-202ENST00000557916 MICALL1Q8N3F8 863 aa27.64■■■□□ 2.02
SMAD6-202ENST00000557916 POP1Q99575 1024 aaKnown RBP27.64■■■□□ 2.02
SMAD6-202ENST00000557916 ZBP1Q9H171 429 aa27.64■■■□□ 2.02
SMAD6-202ENST00000557916 NGRNQ9NPE2 291 aaKnown RBP27.64■■■□□ 2.02
SMAD6-202ENST00000557916 INTS13Q9NVM9 706 aa27.64■■■□□ 2.02
SMAD6-202ENST00000557916 FSCN2O14926 492 aa27.63■■■□□ 2.01
SMAD6-202ENST00000557916 TNNI1P19237 187 aa27.63■■■□□ 2.01
SMAD6-202ENST00000557916 STX17P56962 302 aa27.63■■■□□ 2.01
SMAD6-202ENST00000557916 BMS1Q14692 1282 aaKnown RBP27.63■■■□□ 2.01
SMAD6-202ENST00000557916 FAM186BQ8IYM0 893 aa27.63■■■□□ 2.01
SMAD6-202ENST00000557916 RNF168Q8IYW5 571 aaPredicted RBP27.63■■■□□ 2.01
SMAD6-202ENST00000557916 ANKRD36BP1Q96IX9 119 aa27.63■■■□□ 2.01
SMAD6-202ENST00000557916 FAM84AQ96KN4 292 aa27.63■■■□□ 2.01
SMAD6-202ENST00000557916 CGRRF1Q99675 332 aa27.63■■■□□ 2.01
SMAD6-202ENST00000557916 HERC2P3Q9BVR0 1158 aa27.63■■■□□ 2.01
SMAD6-202ENST00000557916 NUB1Q9Y5A7 615 aa27.63■■■□□ 2.01
SMAD6-202ENST00000557916 PCDHGC5Q9Y5F6 944 aa27.63■■■□□ 2.01
SMAD6-202ENST00000557916 PTPRJQ12913 1337 aa27.63■■■□□ 2.01
SMAD6-202ENST00000557916 ELAVL2Q12926 359 aaKnown RBP27.62■■■□□ 2.01
SMAD6-202ENST00000557916 DUOXA2Q1HG44 320 aa27.62■■■□□ 2.01
SMAD6-202ENST00000557916 KLHL40Q2TBA0 621 aa27.62■■■□□ 2.01
SMAD6-202ENST00000557916 TIGD5Q53EQ6 642 aa27.62■■■□□ 2.01
SMAD6-202ENST00000557916 PLPP4Q5VZY2 271 aa27.62■■■□□ 2.01
SMAD6-202ENST00000557916 C9orf57Q5W0N0 161 aa27.62■■■□□ 2.01
SMAD6-202ENST00000557916 TTI2Q6NXR4 508 aa27.62■■■□□ 2.01
SMAD6-202ENST00000557916 CAVIN1Q6NZI2 390 aaKnown RBP27.62■■■□□ 2.01
SMAD6-202ENST00000557916 ZC3H3Q8IXZ2 948 aaKnown RBP27.62■■■□□ 2.01
SMAD6-202ENST00000557916 OR5B17Q8NGF7 314 aa27.62■■■□□ 2.01
SMAD6-202ENST00000557916 PLEKHO2Q8TD55 490 aa27.62■■■□□ 2.01
SMAD6-202ENST00000557916 PARD3BQ8TEW8 1205 aa27.62■■■□□ 2.01
SMAD6-202ENST00000557916 SYAP1Q96A49 352 aaPredicted RBP27.62■■■□□ 2.01
SMAD6-202ENST00000557916 MTMR12Q9C0I1 747 aa27.62■■■□□ 2.01
SMAD6-202ENST00000557916 GZF1Q9H116 711 aaPredicted RBP27.62■■■□□ 2.01
SMAD6-202ENST00000557916 STXBP5LQ9Y2K9 1186 aa27.62■■■□□ 2.01
SMAD6-202ENST00000557916 ANO9A1A5B4 782 aa27.61■■■□□ 2.01
SMAD6-202ENST00000557916 PPEF2O14830 753 aa27.61■■■□□ 2.01
SMAD6-202ENST00000557916 TRAPPC3O43617 180 aa27.61■■■□□ 2.01
SMAD6-202ENST00000557916 CTSAP10619 480 aa27.61■■■□□ 2.01
SMAD6-202ENST00000557916 USP41Q3LFD5 358 aa27.61■■■□□ 2.01
SMAD6-202ENST00000557916 DPCR1Q3MIW9 517 aa27.61■■■□□ 2.01
SMAD6-202ENST00000557916 FOXR2Q6PJQ5 311 aa27.61■■■□□ 2.01
SMAD6-202ENST00000557916 C1orf127Q8N9H9 656 aa27.61■■■□□ 2.01
SMAD6-202ENST00000557916 DUSP9Q99956 384 aaKnown RBP27.61■■■□□ 2.01
SMAD6-202ENST00000557916 MKNK1Q9BUB5 465 aa27.61■■■□□ 2.01
SMAD6-202ENST00000557916 PRRC2BQ5JSZ5 2229 aaKnown RBP27.6■■■□□ 2.01
SMAD6-202ENST00000557916 PIRO00625 290 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms