RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 DDX27Q96GQ7 796 aaKnown RBP12.57□□□□□ -0.4
VIPAS39-211ENST00000557658 SLC24A3Q9HC58 644 aa12.57□□□□□ -0.4
VIPAS39-211ENST00000557658 NEU2Q9Y3R4 380 aa12.57□□□□□ -0.4
VIPAS39-211ENST00000557658 TOM1O60784 492 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 DCTN3O75935 186 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 ASMTLO95671 621 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 MYBL1P10243 752 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 KRT5P13647 590 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 ALDH3A1P30838 453 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 GCKP35557 465 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 MAGEA4P43358 317 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 MCCD1P59942 119 aaPredicted RBP12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 PTP4A2Q12974 167 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 BLMHQ13867 455 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 SPARCL1Q14515 664 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 TMEM63BQ5T3F8 832 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 CBWD2Q8IUF1 395 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 FBXL13Q8NEE6 735 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 INPP5DQ92835 1189 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 CFAP57Q96MR6 1250 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 LRRC37BQ96QE4 947 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 CORO1CQ9ULV4 474 aaPredicted RBP12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 PHTF1Q9UMS5 762 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 EXOC7Q9UPT5 735 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 ZNF536O15090 1300 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 MROH7Q68CQ1 1323 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 ATRNL1Q5VV63 1379 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 EXOC1LA0A1B0GW35 172 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 E7ENQ6 273 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 RALAP11233 206 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 RARRES1P49788 294 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 JAG1P78504 1218 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 CYP4F22Q6NT55 531 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 TRABD2AQ86V40 505 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 MCOLN2Q8IZK6 566 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 KCNV2Q8TDN2 545 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 PARD3BQ8TEW8 1205 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 DHX38Q92620 1227 aaKnown RBP12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 NAF1Q96HR8 494 aaKnown RBP12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 TMEM237Q96Q45 408 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 RBM15Q96T37 977 aaKnown RBP eCLIP12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 MXRA8Q9BRK3 442 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 HEMGNQ9BXL5 484 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 RNPEPL1Q9HAU8 725 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 RAB20Q9NX57 234 aa12.56□□□□□ -0.4
VIPAS39-211ENST00000557658 SLC16A4O15374 487 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 SPAG7O75391 227 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 DNAJC3Q13217 504 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 KLF1Q13351 362 aaPredicted RBP12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 MIS18BP1Q6P0N0 1132 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 RGS9BPQ6ZS82 235 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 ZCCHC9Q8N567 271 aaKnown RBP12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 TEX9Q8N6V9 391 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 SLC17A8Q8NDX2 589 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 TAS1R2Q8TE23 839 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 ARHGEF10LQ9HCE6 1279 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 CHKBQ9Y259 395 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 ZHX2Q9Y6X8 837 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 UBR3Q6ZT12 1888 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 PRPF4O43172 522 aaKnown RBP eCLIP12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 UNGP13051 313 aaPredicted RBP12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 CALB2P22676 271 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 CALRP27797 417 aaKnown RBP12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 RASSF2P50749 326 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 SLC18A1P54219 525 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 PEX3P56589 373 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 GRIK3Q13003 919 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 ENOSF1Q7L5Y1 443 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 GSTA5Q7RTV2 222 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 USP37Q86T82 979 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 ARMC2Q8NEN0 867 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 SAAL1Q96ER3 474 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 TTC25Q96NG3 672 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 TIPINQ9BVW5 301 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 PKD2L1Q9P0L9 805 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 SENP1Q9P0U3 644 aa12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 SMG5Q9UPR3 1016 aaKnown RBP12.55□□□□□ -0.4
VIPAS39-211ENST00000557658 SLX4Q8IY92 1834 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 POLRMTO00411 1230 aaKnown RBP12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 PSTPIP1O43586 416 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 PROSCO94903 275 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 GNAZP19086 355 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 TARSP26639 723 aaKnown RBP12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 CDC25CP30307 473 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 NCKAP1LP55160 1127 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 SATB1Q01826 763 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 MOGSQ13724 837 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 EP400NLQ6ZTU2 488 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 PODNQ7Z5L7 613 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 TDRPQ86YL5 185 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 RHOT1Q8IXI2 618 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 LARGE2Q8N3Y3 721 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 TMC2Q8TDI7 906 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 LRRC8CQ8TDW0 803 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 DENND1AQ8TEH3 1009 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 CHURC1Q8WUH1 139 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 ZNF622Q969S3 477 aaKnown RBP eCLIP12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 OSBPL8Q9BZF1 889 aa12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 RANBP17Q9H2T7 1088 aaKnown RBP12.54□□□□□ -0.4
VIPAS39-211ENST00000557658 TRABDQ9H4I3 376 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms