RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 IFIT3O14879 490 aaKnown RBP10.51□□□□□ -0.73
NEDD1-211ENST00000557454 OPHN1O60890 802 aa10.51□□□□□ -0.73
NEDD1-211ENST00000557454 CD59P13987 128 aa10.51□□□□□ -0.73
NEDD1-211ENST00000557454 DNM2P50570 870 aa10.51□□□□□ -0.73
NEDD1-211ENST00000557454 ATXN3P54252 364 aaPredicted RBP10.51□□□□□ -0.73
NEDD1-211ENST00000557454 SPIRE1Q08AE8 756 aa10.51□□□□□ -0.73
NEDD1-211ENST00000557454 GRIK3Q13003 919 aa10.51□□□□□ -0.73
NEDD1-211ENST00000557454 HNRNPDQ14103 355 aaKnown RBP10.51□□□□□ -0.73
NEDD1-211ENST00000557454 TEAD2Q15562 447 aa10.51□□□□□ -0.73
NEDD1-211ENST00000557454 IMMTQ16891 758 aaKnown RBP10.51□□□□□ -0.73
NEDD1-211ENST00000557454 PCSK4Q6UW60 755 aa10.51□□□□□ -0.73
NEDD1-211ENST00000557454 ARMCX6Q7L4S7 300 aa10.51□□□□□ -0.73
NEDD1-211ENST00000557454 NIPA1Q7RTP0 329 aa10.51□□□□□ -0.73
NEDD1-211ENST00000557454 C11orf74Q86VG3 221 aa10.51□□□□□ -0.73
NEDD1-211ENST00000557454 FAM181AQ8N9Y4 354 aa10.51□□□□□ -0.73
NEDD1-211ENST00000557454 OR2I1PQ8NGU4 316 aa10.51□□□□□ -0.73
NEDD1-211ENST00000557454 FCRL3Q96P31 734 aaPredicted RBP10.51□□□□□ -0.73
NEDD1-211ENST00000557454 NXF3Q9H4D5 531 aaKnown RBP10.51□□□□□ -0.73
NEDD1-211ENST00000557454 TMEM74BQ9NUR3 256 aa10.51□□□□□ -0.73
NEDD1-211ENST00000557454 MTRRQ9UBK8 725 aa10.51□□□□□ -0.73
NEDD1-211ENST00000557454 EBF1Q9UH73 591 aa10.51□□□□□ -0.73
NEDD1-211ENST00000557454 SEPT9Q9UHD8 586 aaPredicted RBP10.51□□□□□ -0.73
NEDD1-211ENST00000557454 ZMYM2Q9UBW7 1377 aa10.51□□□□□ -0.73
NEDD1-211ENST00000557454 GON4LQ3T8J9 2241 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 ABCA12Q86UK0 2595 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 IGLV3-22A0A075B6J6 115 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 CAPN8A6NHC0 703 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 PRRG1O14668 218 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 SH3BP5O60239 455 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 KRT38O76015 456 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 WISP1O95388 367 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 EGFP01133 1207 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 MYL4P12829 197 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 SREBF1P36956 1147 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 MFAP1P55081 439 aaKnown RBP10.5□□□□□ -0.73
NEDD1-211ENST00000557454 GRSF1Q12849 480 aaKnown RBP eCLIP10.5□□□□□ -0.73
NEDD1-211ENST00000557454 MAPK6Q16659 721 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 USP39Q53GS9 565 aaKnown RBP10.5□□□□□ -0.73
NEDD1-211ENST00000557454 TMEM196Q5HYL7 178 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 CYP4A22Q5TCH4 519 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 HEATR3Q7Z4Q2 680 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 CATIPQ7Z7H3 387 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 CMTR1Q8N1G2 835 aaKnown RBP10.5□□□□□ -0.73
NEDD1-211ENST00000557454 E2F7Q96AV8 911 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 LRRC3BQ96PB8 259 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 CEP89Q96ST8 783 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 TBC1D22BQ9NU19 505 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 GIT1Q9Y2X7 761 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 SALL3Q9BXA9 1300 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 VWA8A3KMH1 1905 aa10.5□□□□□ -0.73
NEDD1-211ENST00000557454 MYH9P35579 1960 aaKnown RBP10.5□□□□□ -0.73
NEDD1-211ENST00000557454 TTLL13PA6NNM8 815 aa10.49□□□□□ -0.73
NEDD1-211ENST00000557454 WDR64B1ANS9 1081 aa10.49□□□□□ -0.73
NEDD1-211ENST00000557454 CFIP05156 583 aa10.49□□□□□ -0.73
NEDD1-211ENST00000557454 MS4A1P11836 297 aa10.49□□□□□ -0.73
NEDD1-211ENST00000557454 AKAP5P24588 427 aa10.49□□□□□ -0.73
NEDD1-211ENST00000557454 DMC1Q14565 340 aa10.49□□□□□ -0.73
NEDD1-211ENST00000557454 SLC23A3Q6PIS1 610 aa10.49□□□□□ -0.73
NEDD1-211ENST00000557454 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.49□□□□□ -0.73
NEDD1-211ENST00000557454 HAUS6Q7Z4H7 955 aa10.49□□□□□ -0.73
NEDD1-211ENST00000557454 SLCO6A1Q86UG4 719 aa10.49□□□□□ -0.73
NEDD1-211ENST00000557454 SRBD1Q8N5C6 995 aaKnown RBP10.49□□□□□ -0.73
NEDD1-211ENST00000557454 MINDY1Q8N5J2 469 aa10.49□□□□□ -0.73
NEDD1-211ENST00000557454 DAGLBQ8NCG7 672 aa10.49□□□□□ -0.73
NEDD1-211ENST00000557454 RPLP0P6Q8NHW5 317 aa10.49□□□□□ -0.73
NEDD1-211ENST00000557454 CTCFLQ8NI51 663 aaPredicted RBP10.49□□□□□ -0.73
NEDD1-211ENST00000557454 CPB2Q96IY4 423 aa10.49□□□□□ -0.73
NEDD1-211ENST00000557454 POLMQ9NP87 494 aaPredicted RBP10.49□□□□□ -0.73
NEDD1-211ENST00000557454 DISC1Q9NRI5 854 aa10.49□□□□□ -0.73
NEDD1-211ENST00000557454 BMP2KQ9NSY1 1161 aaPredicted RBP10.49□□□□□ -0.73
NEDD1-211ENST00000557454 KLK14Q9P0G3 267 aa10.49□□□□□ -0.73
NEDD1-211ENST00000557454 PCDHB9Q9Y5E1 797 aa10.49□□□□□ -0.73
NEDD1-211ENST00000557454 INSL5Q9Y5Q6 135 aa10.49□□□□□ -0.73
NEDD1-211ENST00000557454 ERICH2A1L162 156 aa10.48□□□□□ -0.73
NEDD1-211ENST00000557454 TRABD2BA6NFA1 517 aa10.48□□□□□ -0.73
NEDD1-211ENST00000557454 ELF1P32519 619 aa10.48□□□□□ -0.73
NEDD1-211ENST00000557454 PTGER3P43115 390 aa10.48□□□□□ -0.73
NEDD1-211ENST00000557454 ROR1Q01973 937 aa10.48□□□□□ -0.73
NEDD1-211ENST00000557454 ELAVL2Q12926 359 aaKnown RBP10.48□□□□□ -0.73
NEDD1-211ENST00000557454 TUSC3Q13454 348 aa10.48□□□□□ -0.73
NEDD1-211ENST00000557454 ARHGAP29Q52LW3 1261 aa10.48□□□□□ -0.73
NEDD1-211ENST00000557454 STXBP5Q5T5C0 1151 aa10.48□□□□□ -0.73
NEDD1-211ENST00000557454 TOGARAM2Q6ZUX3 1019 aa10.48□□□□□ -0.73
NEDD1-211ENST00000557454 SYT13Q7L8C5 426 aa10.48□□□□□ -0.73
NEDD1-211ENST00000557454 SYT12Q8IV01 421 aa10.48□□□□□ -0.73
NEDD1-211ENST00000557454 SHKBP1Q8TBC3 707 aa10.48□□□□□ -0.73
NEDD1-211ENST00000557454 CHMP4BQ9H444 224 aaKnown RBP10.48□□□□□ -0.73
NEDD1-211ENST00000557454 CYP4F11Q9HBI6 524 aa10.48□□□□□ -0.73
NEDD1-211ENST00000557454 ASAH2Q9NR71 780 aa10.48□□□□□ -0.73
NEDD1-211ENST00000557454 DNMT3LQ9UJW3 386 aa10.48□□□□□ -0.73
NEDD1-211ENST00000557454 APOBEC2Q9Y235 224 aaKnown RBP10.48□□□□□ -0.73
NEDD1-211ENST00000557454 COL4A3BPQ9Y5P4 624 aa10.48□□□□□ -0.73
NEDD1-211ENST00000557454 DOPEY1Q5JWR5 2465 aa10.48□□□□□ -0.73
NEDD1-211ENST00000557454 THADAQ6YHU6 1953 aa10.48□□□□□ -0.73
NEDD1-211ENST00000557454 ATG2BQ96BY7 2078 aa10.48□□□□□ -0.73
NEDD1-211ENST00000557454 UBR5O95071 2799 aaPredicted RBP10.48□□□□□ -0.73
NEDD1-211ENST00000557454 TDRD15B5MCY1 1934 aaKnown RBP10.47□□□□□ -0.73
NEDD1-211ENST00000557454 RELNP78509 3460 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 TNFRSF10BO14763 440 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms