RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 RSPRY1Q96DX4 576 aa13.87□□□□□ -0.19
PSEN1-221ENST00000557293 PPP1R10Q96QC0 940 aaKnown RBP13.87□□□□□ -0.19
PSEN1-221ENST00000557293 CORO1BQ9BR76 489 aa13.87□□□□□ -0.19
PSEN1-221ENST00000557293 POLR3FQ9H1D9 316 aaPredicted RBP13.87□□□□□ -0.19
PSEN1-221ENST00000557293 TRPV4Q9HBA0 871 aa13.87□□□□□ -0.19
PSEN1-221ENST00000557293 GJB4Q9NTQ9 266 aa13.87□□□□□ -0.19
PSEN1-221ENST00000557293 CCNT1O60563 726 aaKnown RBP13.86□□□□□ -0.19
PSEN1-221ENST00000557293 B3GAT3O94766 335 aa13.86□□□□□ -0.19
PSEN1-221ENST00000557293 CLCNKBP51801 687 aa13.86□□□□□ -0.19
PSEN1-221ENST00000557293 MLLT6P55198 1093 aaPredicted RBP13.86□□□□□ -0.19
PSEN1-221ENST00000557293 MRPL58Q14197 206 aaKnown RBP13.86□□□□□ -0.19
PSEN1-221ENST00000557293 UPP1Q16831 310 aa13.86□□□□□ -0.19
PSEN1-221ENST00000557293 CDCA2Q69YH5 1023 aaPredicted RBP13.86□□□□□ -0.19
PSEN1-221ENST00000557293 ANKS3Q6ZW76 656 aa13.86□□□□□ -0.19
PSEN1-221ENST00000557293 MFSD6LQ8IWD5 586 aa13.86□□□□□ -0.19
PSEN1-221ENST00000557293 TRIM22Q8IYM9 498 aa13.86□□□□□ -0.19
PSEN1-221ENST00000557293 FAM177A1Q8N128 213 aaPredicted RBP13.86□□□□□ -0.19
PSEN1-221ENST00000557293 PIGOQ8TEQ8 1089 aa13.86□□□□□ -0.19
PSEN1-221ENST00000557293 BSNDQ8WZ55 320 aa13.86□□□□□ -0.19
PSEN1-221ENST00000557293 DDX1Q92499 740 aaKnown RBP13.86□□□□□ -0.19
PSEN1-221ENST00000557293 SMARCD2Q92925 531 aa13.86□□□□□ -0.19
PSEN1-221ENST00000557293 PRIMPOLQ96LW4 560 aa13.86□□□□□ -0.19
PSEN1-221ENST00000557293 GOLGA2P5Q9HBQ8 144 aa13.86□□□□□ -0.19
PSEN1-221ENST00000557293 PRMT7Q9NVM4 692 aaPredicted RBP13.86□□□□□ -0.19
PSEN1-221ENST00000557293 CEP72Q9P209 647 aa13.86□□□□□ -0.19
PSEN1-221ENST00000557293 TICRRQ7Z2Z1 1910 aa13.86□□□□□ -0.19
PSEN1-221ENST00000557293 ATRXP46100 2492 aa13.85□□□□□ -0.19
PSEN1-221ENST00000557293 SDK1Q7Z5N4 2213 aa13.85□□□□□ -0.19
PSEN1-221ENST00000557293 FAM205CA6NFA0 338 aa13.85□□□□□ -0.19
PSEN1-221ENST00000557293 N4BP3O15049 544 aa13.85□□□□□ -0.19
PSEN1-221ENST00000557293 LRG1P02750 347 aa13.85□□□□□ -0.19
PSEN1-221ENST00000557293 PROS1P07225 676 aa13.85□□□□□ -0.19
PSEN1-221ENST00000557293 ZNF806P0C7X5 589 aa13.85□□□□□ -0.19
PSEN1-221ENST00000557293 ATF2P15336 505 aa13.85□□□□□ -0.19
PSEN1-221ENST00000557293 GJA1P17302 382 aa13.85□□□□□ -0.19
PSEN1-221ENST00000557293 HOXA6P31267 233 aa13.85□□□□□ -0.19
PSEN1-221ENST00000557293 SOX4Q06945 474 aaPredicted RBP13.85□□□□□ -0.19
PSEN1-221ENST00000557293 HEATR6Q6AI08 1181 aaKnown RBP13.85□□□□□ -0.19
PSEN1-221ENST00000557293 Q6ZS52 159 aa13.85□□□□□ -0.19
PSEN1-221ENST00000557293 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.85□□□□□ -0.19
PSEN1-221ENST00000557293 LARP6Q9BRS8 491 aaKnown RBP13.85□□□□□ -0.19
PSEN1-221ENST00000557293 CCDC113Q9H0I3 377 aa13.85□□□□□ -0.19
PSEN1-221ENST00000557293 CCDC194A0A1B0GVG4 234 aa13.84□□□□□ -0.19
PSEN1-221ENST00000557293 LRRIQ4A6NIV6 560 aa13.84□□□□□ -0.19
PSEN1-221ENST00000557293 ZNF197O14709 1029 aa13.84□□□□□ -0.19
PSEN1-221ENST00000557293 ZNF263O14978 683 aa13.84□□□□□ -0.19
PSEN1-221ENST00000557293 AXIN1O15169 862 aa13.84□□□□□ -0.19
PSEN1-221ENST00000557293 FOXD2O60548 495 aaPredicted RBP13.84□□□□□ -0.19
PSEN1-221ENST00000557293 DTNBO60941 627 aa13.84□□□□□ -0.19
PSEN1-221ENST00000557293 XRCC6P12956 609 aaKnown RBP eCLIP13.84□□□□□ -0.19
PSEN1-221ENST00000557293 SOX9P48436 509 aa13.84□□□□□ -0.19
PSEN1-221ENST00000557293 EPHA5P54756 1037 aa13.84□□□□□ -0.19
PSEN1-221ENST00000557293 CCDC6Q16204 474 aa13.84□□□□□ -0.19
PSEN1-221ENST00000557293 GLRA4Q5JXX5 417 aa13.84□□□□□ -0.19
PSEN1-221ENST00000557293 IL31Q6EBC2 164 aa13.84□□□□□ -0.19
PSEN1-221ENST00000557293 TXNDC11Q6PKC3 985 aa13.84□□□□□ -0.19
PSEN1-221ENST00000557293 PIK3AP1Q6ZUJ8 805 aa13.84□□□□□ -0.19
PSEN1-221ENST00000557293 MAEAQ7L5Y9 396 aa13.84□□□□□ -0.19
PSEN1-221ENST00000557293 WDR5BQ86VZ2 330 aa13.84□□□□□ -0.19
PSEN1-221ENST00000557293 DEPDC1BQ8WUY9 529 aa13.84□□□□□ -0.19
PSEN1-221ENST00000557293 LRRC3BQ96PB8 259 aa13.84□□□□□ -0.19
PSEN1-221ENST00000557293 LRRC3Q9BY71 257 aa13.84□□□□□ -0.19
PSEN1-221ENST00000557293 ARRDC1-AS1Q9H2J1 176 aa13.84□□□□□ -0.19
PSEN1-221ENST00000557293 GDAQ9Y2T3 454 aa13.84□□□□□ -0.19
PSEN1-221ENST00000557293 INSL5Q9Y5Q6 135 aa13.84□□□□□ -0.19
PSEN1-221ENST00000557293 TRIP11Q15643 1979 aa13.83□□□□□ -0.19
PSEN1-221ENST00000557293 HEPACAM2A8MVW5 462 aa13.83□□□□□ -0.2
PSEN1-221ENST00000557293 ACKR2O00590 384 aa13.83□□□□□ -0.2
PSEN1-221ENST00000557293 USO1O60763 962 aaKnown RBP13.83□□□□□ -0.2
PSEN1-221ENST00000557293 SPATA31C1P0DKV0 1188 aa13.83□□□□□ -0.2
PSEN1-221ENST00000557293 KCNA4P22459 653 aa13.83□□□□□ -0.2
PSEN1-221ENST00000557293 ELF1P32519 619 aa13.83□□□□□ -0.2
PSEN1-221ENST00000557293 RAP1GAPP47736 663 aa13.83□□□□□ -0.2
PSEN1-221ENST00000557293 IRX6P78412 446 aaPredicted RBP13.83□□□□□ -0.2
PSEN1-221ENST00000557293 XKR4Q5GH76 650 aa13.83□□□□□ -0.2
PSEN1-221ENST00000557293 NT5DC1Q5TFE4 455 aa13.83□□□□□ -0.2
PSEN1-221ENST00000557293 ALKAL1Q6UXT8 129 aa13.83□□□□□ -0.2
PSEN1-221ENST00000557293 SLFN12Q8IYM2 578 aa13.83□□□□□ -0.2
PSEN1-221ENST00000557293 ZSCAN18Q8TBC5 510 aaPredicted RBP13.83□□□□□ -0.2
PSEN1-221ENST00000557293 ZNF274Q96GC6 653 aaPredicted RBP13.83□□□□□ -0.2
PSEN1-221ENST00000557293 LSM14BQ9BX40 385 aaKnown RBP13.83□□□□□ -0.2
PSEN1-221ENST00000557293 CYP4F11Q9HBI6 524 aa13.83□□□□□ -0.2
PSEN1-221ENST00000557293 SH2B1Q9NRF2 756 aaPredicted RBP13.83□□□□□ -0.2
PSEN1-221ENST00000557293 PCDHA12Q9UN75 941 aa13.83□□□□□ -0.2
PSEN1-221ENST00000557293 WASF3Q9UPY6 502 aa13.83□□□□□ -0.2
PSEN1-221ENST00000557293 FAM208BQ5VWN6 2430 aa13.83□□□□□ -0.2
PSEN1-221ENST00000557293 FRYQ5TBA9 3013 aa13.82□□□□□ -0.2
PSEN1-221ENST00000557293 GREB1Q4ZG55 1949 aa13.82□□□□□ -0.2
PSEN1-221ENST00000557293 SMIM28A0A1B0GU29 152 aa13.82□□□□□ -0.2
PSEN1-221ENST00000557293 MYBPHLA2RUH7 354 aa13.82□□□□□ -0.2
PSEN1-221ENST00000557293 C1QTNF9BB2RNN3 333 aa13.82□□□□□ -0.2
PSEN1-221ENST00000557293 WNT7AO00755 349 aa13.82□□□□□ -0.2
PSEN1-221ENST00000557293 PRRG1O14668 218 aa13.82□□□□□ -0.2
PSEN1-221ENST00000557293 MARCH6O60337 910 aa13.82□□□□□ -0.2
PSEN1-221ENST00000557293 KCNK5O95279 499 aa13.82□□□□□ -0.2
PSEN1-221ENST00000557293 C1QTNF9P0C862 333 aa13.82□□□□□ -0.2
PSEN1-221ENST00000557293 ARPP19P56211 112 aa13.82□□□□□ -0.2
PSEN1-221ENST00000557293 PRPF4BQ13523 1007 aaKnown RBP13.82□□□□□ -0.2
PSEN1-221ENST00000557293 AASDHQ4L235 1098 aaPredicted RBP13.82□□□□□ -0.2
PSEN1-221ENST00000557293 PLA2G2CQ5R387 149 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms