RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 NRLP54845 237 aa13.53□□□□□ -0.24
SNX6-209ENST00000557265 SPEM2Q0P670 501 aa13.53□□□□□ -0.24
SNX6-209ENST00000557265 NT5DC1Q5TFE4 455 aa13.53□□□□□ -0.24
SNX6-209ENST00000557265 ATF7IP2Q5U623 682 aa13.53□□□□□ -0.24
SNX6-209ENST00000557265 SLC8B1Q6J4K2 584 aa13.53□□□□□ -0.24
SNX6-209ENST00000557265 TRMT61BQ9BVS5 477 aaKnown RBP13.53□□□□□ -0.24
SNX6-209ENST00000557265 TMEM60Q9H2L4 133 aa13.53□□□□□ -0.24
SNX6-209ENST00000557265 CHRDQ9H2X0 955 aa13.53□□□□□ -0.24
SNX6-209ENST00000557265 CYP4F11Q9HBI6 524 aa13.53□□□□□ -0.24
SNX6-209ENST00000557265 POLD4Q9HCU8 107 aa13.53□□□□□ -0.24
SNX6-209ENST00000557265 RAB23Q9ULC3 237 aa13.53□□□□□ -0.24
SNX6-209ENST00000557265 SMIM28A0A1B0GU29 152 aa13.52□□□□□ -0.25
SNX6-209ENST00000557265 WDR27A2RRH5 827 aa13.52□□□□□ -0.25
SNX6-209ENST00000557265 ARHGEF35A5YM69 484 aa13.52□□□□□ -0.25
SNX6-209ENST00000557265 ZNF197O14709 1029 aa13.52□□□□□ -0.25
SNX6-209ENST00000557265 SEC24AO95486 1093 aa13.52□□□□□ -0.25
SNX6-209ENST00000557265 CCR2P41597 374 aa13.52□□□□□ -0.25
SNX6-209ENST00000557265 EFNA5P52803 228 aa13.52□□□□□ -0.25
SNX6-209ENST00000557265 SOX4Q06945 474 aaPredicted RBP13.52□□□□□ -0.25
SNX6-209ENST00000557265 PPP2R5DQ14738 602 aa13.52□□□□□ -0.25
SNX6-209ENST00000557265 PPP2R5AQ15172 486 aa13.52□□□□□ -0.25
SNX6-209ENST00000557265 PRSS36Q5K4E3 855 aa13.52□□□□□ -0.25
SNX6-209ENST00000557265 MAMSTRQ6ZN01 415 aa13.52□□□□□ -0.25
SNX6-209ENST00000557265 DIS3L2Q8IYB7 885 aaKnown RBP13.52□□□□□ -0.25
SNX6-209ENST00000557265 NECAB1Q8N987 351 aa13.52□□□□□ -0.25
SNX6-209ENST00000557265 FAM3CQ92520 227 aa13.52□□□□□ -0.25
SNX6-209ENST00000557265 IRF7Q92985 503 aa13.52□□□□□ -0.25
SNX6-209ENST00000557265 ZSWIM3Q96MP5 696 aa13.52□□□□□ -0.25
SNX6-209ENST00000557265 POLR3CQ9BUI4 534 aaPredicted RBP13.52□□□□□ -0.25
SNX6-209ENST00000557265 LMAN1LQ9HAT1 526 aa13.52□□□□□ -0.25
SNX6-209ENST00000557265 KMT2BQ9UMN6 2715 aaPredicted RBP13.51□□□□□ -0.25
SNX6-209ENST00000557265 F5P12259 2224 aa13.51□□□□□ -0.25
SNX6-209ENST00000557265 MYH15Q9Y2K3 1946 aa13.51□□□□□ -0.25
SNX6-209ENST00000557265 MICAL2O94851 1124 aa13.51□□□□□ -0.25
SNX6-209ENST00000557265 ATF2P15336 505 aa13.51□□□□□ -0.25
SNX6-209ENST00000557265 PSMC3P17980 439 aa13.51□□□□□ -0.25
SNX6-209ENST00000557265 GDI1P31150 447 aa13.51□□□□□ -0.25
SNX6-209ENST00000557265 MCM7P33993 719 aa13.51□□□□□ -0.25
SNX6-209ENST00000557265 FOSBP53539 338 aa13.51□□□□□ -0.25
SNX6-209ENST00000557265 CYP4A22Q5TCH4 519 aa13.51□□□□□ -0.25
SNX6-209ENST00000557265 LAIR1Q6GTX8 287 aa13.51□□□□□ -0.25
SNX6-209ENST00000557265 PDZD4Q76G19 769 aaPredicted RBP13.51□□□□□ -0.25
SNX6-209ENST00000557265 APBB1IPQ7Z5R6 666 aaPredicted RBP13.51□□□□□ -0.25
SNX6-209ENST00000557265 MAP4K3Q8IVH8 894 aa13.51□□□□□ -0.25
SNX6-209ENST00000557265 TCEAL8Q8IYN2 117 aa13.51□□□□□ -0.25
SNX6-209ENST00000557265 CELF5Q8N6W0 485 aaKnown RBP13.51□□□□□ -0.25
SNX6-209ENST00000557265 ERMNQ8TAM6 284 aa13.51□□□□□ -0.25
SNX6-209ENST00000557265 SMARCD2Q92925 531 aa13.51□□□□□ -0.25
SNX6-209ENST00000557265 IFT74Q96LB3 600 aa13.51□□□□□ -0.25
SNX6-209ENST00000557265 ASB16Q96NS5 453 aa13.51□□□□□ -0.25
SNX6-209ENST00000557265 ZNF334Q9HCZ1 680 aaPredicted RBP13.51□□□□□ -0.25
SNX6-209ENST00000557265 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.51□□□□□ -0.25
SNX6-209ENST00000557265 PIAS3Q9Y6X2 628 aa13.51□□□□□ -0.25
SNX6-209ENST00000557265 CHD8Q9HCK8 2581 aa13.5□□□□□ -0.25
SNX6-209ENST00000557265 H7C4K7 107 aa13.5□□□□□ -0.25
SNX6-209ENST00000557265 PODXLO00592 558 aa13.5□□□□□ -0.25
SNX6-209ENST00000557265 ADRB1P08588 477 aa13.5□□□□□ -0.25
SNX6-209ENST00000557265 RPA1P27694 616 aa13.5□□□□□ -0.25
SNX6-209ENST00000557265 VIPR2P41587 438 aa13.5□□□□□ -0.25
SNX6-209ENST00000557265 CXCL12P48061 93 aa13.5□□□□□ -0.25
SNX6-209ENST00000557265 CCR3P51677 355 aa13.5□□□□□ -0.25
SNX6-209ENST00000557265 YARSP54577 528 aaKnown RBP13.5□□□□□ -0.25
SNX6-209ENST00000557265 OSTNP61366 133 aa13.5□□□□□ -0.25
SNX6-209ENST00000557265 IQCEQ6IPM2 695 aa13.5□□□□□ -0.25
SNX6-209ENST00000557265 VITQ6UXI7 678 aa13.5□□□□□ -0.25
SNX6-209ENST00000557265 ALKAL1Q6UXT8 129 aa13.5□□□□□ -0.25
SNX6-209ENST00000557265 PRR23BQ6ZRT6 265 aa13.5□□□□□ -0.25
SNX6-209ENST00000557265 HS6ST3Q8IZP7 471 aa13.5□□□□□ -0.25
SNX6-209ENST00000557265 CEP120Q8N960 986 aa13.5□□□□□ -0.25
SNX6-209ENST00000557265 IER2Q9BTL4 223 aa13.5□□□□□ -0.25
SNX6-209ENST00000557265 CCDC94Q9BW85 323 aaPredicted RBP13.5□□□□□ -0.25
SNX6-209ENST00000557265 TRPV5Q9NQA5 729 aa13.5□□□□□ -0.25
SNX6-209ENST00000557265 TOPORSQ9NS56 1045 aaPredicted RBP13.5□□□□□ -0.25
SNX6-209ENST00000557265 SLC38A7Q9NVC3 462 aa13.5□□□□□ -0.25
SNX6-209ENST00000557265 DAXXQ9UER7 740 aaPredicted RBP13.5□□□□□ -0.25
SNX6-209ENST00000557265 FBXL5Q9UKA1 691 aa13.5□□□□□ -0.25
SNX6-209ENST00000557265 TNFSF13BQ9Y275 285 aa13.5□□□□□ -0.25
SNX6-209ENST00000557265 INSL5Q9Y5Q6 135 aa13.5□□□□□ -0.25
SNX6-209ENST00000557265 ARID2Q68CP9 1835 aa13.5□□□□□ -0.25
SNX6-209ENST00000557265 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.49□□□□□ -0.25
SNX6-209ENST00000557265 K7ERI5 159 aa13.49□□□□□ -0.25
SNX6-209ENST00000557265 ZNF263O14978 683 aa13.49□□□□□ -0.25
SNX6-209ENST00000557265 SYN3O14994 580 aa13.49□□□□□ -0.25
SNX6-209ENST00000557265 RETP07949 1114 aa13.49□□□□□ -0.25
SNX6-209ENST00000557265 CHRNB1P11230 501 aa13.49□□□□□ -0.25
SNX6-209ENST00000557265 GJA1P17302 382 aa13.49□□□□□ -0.25
SNX6-209ENST00000557265 GRM5P41594 1212 aa13.49□□□□□ -0.25
SNX6-209ENST00000557265 SATB1Q01826 763 aa13.49□□□□□ -0.25
SNX6-209ENST00000557265 TWF1Q12792 350 aa13.49□□□□□ -0.25
SNX6-209ENST00000557265 TRIM29Q14134 588 aa13.49□□□□□ -0.25
SNX6-209ENST00000557265 MRPL58Q14197 206 aaKnown RBP13.49□□□□□ -0.25
SNX6-209ENST00000557265 ANKRD1Q15327 319 aa13.49□□□□□ -0.25
SNX6-209ENST00000557265 CTXN3Q4LDR2 81 aa13.49□□□□□ -0.25
SNX6-209ENST00000557265 XKR4Q5GH76 650 aa13.49□□□□□ -0.25
SNX6-209ENST00000557265 TPGS2Q68CL5 300 aa13.49□□□□□ -0.25
SNX6-209ENST00000557265 ELMOD1Q8N336 334 aa13.49□□□□□ -0.25
SNX6-209ENST00000557265 NETO1Q8TDF5 533 aa13.49□□□□□ -0.25
SNX6-209ENST00000557265 ZNF512Q96ME7 567 aaPredicted RBP13.49□□□□□ -0.25
SNX6-209ENST00000557265 ZMAT2Q96NC0 199 aaKnown RBP13.49□□□□□ -0.25
SNX6-209ENST00000557265 CDT1Q9H211 546 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms