RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 PRRG1O14668 218 aa13.07□□□□□ -0.32
ACTN1-221ENST00000556571 DTNBO60941 627 aa13.07□□□□□ -0.32
ACTN1-221ENST00000556571 ABLIM3O94929 683 aa13.07□□□□□ -0.32
ACTN1-221ENST00000556571 FDPSP14324 419 aaKnown RBP13.07□□□□□ -0.32
ACTN1-221ENST00000556571 ATF2P15336 505 aa13.07□□□□□ -0.32
ACTN1-221ENST00000556571 FCARP24071 287 aa13.07□□□□□ -0.32
ACTN1-221ENST00000556571 EFNA5P52803 228 aa13.07□□□□□ -0.32
ACTN1-221ENST00000556571 ROR1Q01973 937 aa13.07□□□□□ -0.32
ACTN1-221ENST00000556571 FAM78AQ5JUQ0 283 aa13.07□□□□□ -0.32
ACTN1-221ENST00000556571 PRSS36Q5K4E3 855 aa13.07□□□□□ -0.32
ACTN1-221ENST00000556571 TCEAL8Q8IYN2 117 aa13.07□□□□□ -0.32
ACTN1-221ENST00000556571 CORO1BQ9BR76 489 aa13.07□□□□□ -0.32
ACTN1-221ENST00000556571 POLR3CQ9BUI4 534 aaPredicted RBP13.07□□□□□ -0.32
ACTN1-221ENST00000556571 PARD6AQ9NPB6 346 aa13.07□□□□□ -0.32
ACTN1-221ENST00000556571 TRPV5Q9NQA5 729 aa13.07□□□□□ -0.32
ACTN1-221ENST00000556571 NDRG2Q9UN36 371 aaKnown RBP13.07□□□□□ -0.32
ACTN1-221ENST00000556571 SMIM28A0A1B0GU29 152 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 ARHGEF35A5YM69 484 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 BTBD18B2RXH4 712 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 H7C4K7 107 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 I3L4J1 428 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 LRP3O75074 770 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 MED24O75448 989 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 EDN1P05305 212 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 RETP07949 1114 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 TDGF1P13385 188 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 BRCC3P46736 316 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 CCR3P51677 355 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 YARSP54577 528 aaKnown RBP13.06□□□□□ -0.32
ACTN1-221ENST00000556571 GRM2Q14416 872 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 CYP4A22Q5TCH4 519 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 ATF7IP2Q5U623 682 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 LAIR1Q6GTX8 287 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 PDZD4Q76G19 769 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-221ENST00000556571 MAP4K3Q8IVH8 894 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 C3orf58Q8NDZ4 430 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 ERMNQ8TAM6 284 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 FAM3CQ92520 227 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 TCEAL4Q96EI5 215 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 IFT74Q96LB3 600 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 ASB16Q96NS5 453 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 LMAN1LQ9HAT1 526 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 CYP4F11Q9HBI6 524 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 ZNF334Q9HCZ1 680 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-221ENST00000556571 TOPORSQ9NS56 1045 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-221ENST00000556571 SLC38A7Q9NVC3 462 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 PATJQ8NI35 1801 aa13.06□□□□□ -0.32
ACTN1-221ENST00000556571 VWA8A3KMH1 1905 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 MAP1BP46821 2468 aaKnown RBP13.05□□□□□ -0.32
ACTN1-221ENST00000556571 CNOT1A5YKK6 2376 aaKnown RBP13.05□□□□□ -0.32
ACTN1-221ENST00000556571 WDR27A2RRH5 827 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 WNT7AO00755 349 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 SYN3O14994 580 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 ADRB1P08588 477 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 PSMC3P17980 439 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 RPA1P27694 616 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 ARPP19P56211 112 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 SPEM2Q0P670 501 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 ANKRD1Q15327 319 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 XKR4Q5GH76 650 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 NT5DC1Q5TFE4 455 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 TPGS2Q68CL5 300 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 IQCEQ6IPM2 695 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 DIS3L2Q8IYB7 885 aaKnown RBP13.05□□□□□ -0.32
ACTN1-221ENST00000556571 ELMOD1Q8N336 334 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 NETO1Q8TDF5 533 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 DEPDC1BQ8WUY9 529 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 KIFAP3Q92845 792 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 SMARCD2Q92925 531 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 ZNF512Q96ME7 567 aaPredicted RBP13.05□□□□□ -0.32
ACTN1-221ENST00000556571 CCDC94Q9BW85 323 aaPredicted RBP13.05□□□□□ -0.32
ACTN1-221ENST00000556571 TMEM60Q9H2L4 133 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 GOLGA2P5Q9HBQ8 144 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 MAFFQ9ULX9 164 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 TNFSF13BQ9Y275 285 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 INSL5Q9Y5Q6 135 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 PIAS3Q9Y6X2 628 aa13.05□□□□□ -0.32
ACTN1-221ENST00000556571 K7ERI5 159 aa13.04□□□□□ -0.32
ACTN1-221ENST00000556571 PODXLO00592 558 aa13.04□□□□□ -0.32
ACTN1-221ENST00000556571 SLC30A4O14863 429 aa13.04□□□□□ -0.32
ACTN1-221ENST00000556571 SEC24AO95486 1093 aa13.04□□□□□ -0.32
ACTN1-221ENST00000556571 MUTP22033 750 aa13.04□□□□□ -0.32
ACTN1-221ENST00000556571 GDI1P31150 447 aa13.04□□□□□ -0.32
ACTN1-221ENST00000556571 GRM5P41594 1212 aa13.04□□□□□ -0.32
ACTN1-221ENST00000556571 CCR2P41597 374 aa13.04□□□□□ -0.32
ACTN1-221ENST00000556571 CXCL12P48061 93 aa13.04□□□□□ -0.32
ACTN1-221ENST00000556571 MLLT6P55198 1093 aaPredicted RBP13.04□□□□□ -0.32
ACTN1-221ENST00000556571 SOX4Q06945 474 aaPredicted RBP13.04□□□□□ -0.32
ACTN1-221ENST00000556571 TRIM29Q14134 588 aa13.04□□□□□ -0.32
ACTN1-221ENST00000556571 MRPL58Q14197 206 aaKnown RBP13.04□□□□□ -0.32
ACTN1-221ENST00000556571 LPAL2Q16609 132 aa13.04□□□□□ -0.32
ACTN1-221ENST00000556571 ALKAL1Q6UXT8 129 aa13.04□□□□□ -0.32
ACTN1-221ENST00000556571 PRR23BQ6ZRT6 265 aa13.04□□□□□ -0.32
ACTN1-221ENST00000556571 LEMD2Q8NC56 503 aa13.04□□□□□ -0.32
ACTN1-221ENST00000556571 KIFC3Q9BVG8 833 aa13.04□□□□□ -0.32
ACTN1-221ENST00000556571 FBXL5Q9UKA1 691 aa13.04□□□□□ -0.32
ACTN1-221ENST00000556571 CACNA1GO43497 2377 aa13.03□□□□□ -0.32
ACTN1-221ENST00000556571 ZNF263O14978 683 aa13.03□□□□□ -0.32
ACTN1-221ENST00000556571 RPL9P32969 192 aaKnown RBP13.03□□□□□ -0.32
ACTN1-221ENST00000556571 MCM7P33993 719 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms