RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 ZNF202O95125 648 aa4.71□□□□□ -1.66
ATXN3-240ENST00000556339 TFRCP02786 760 aaKnown RBP4.71□□□□□ -1.66
ATXN3-240ENST00000556339 UQCRFS1P1P0C7P4 283 aa4.71□□□□□ -1.66
ATXN3-240ENST00000556339 ZNF888P0CJ79 500 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-240ENST00000556339 ETFBP38117 255 aa4.71□□□□□ -1.66
ATXN3-240ENST00000556339 BTDP43251 543 aa4.71□□□□□ -1.66
ATXN3-240ENST00000556339 RARSP54136 660 aaKnown RBP4.71□□□□□ -1.66
ATXN3-240ENST00000556339 LACTBP83111 547 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-240ENST00000556339 CCDC158Q5M9N0 1113 aa4.71□□□□□ -1.66
ATXN3-240ENST00000556339 TTC39AQ5SRH9 613 aa4.71□□□□□ -1.66
ATXN3-240ENST00000556339 KCTD1Q719H9 257 aa4.71□□□□□ -1.66
ATXN3-240ENST00000556339 SMCR8Q8TEV9 937 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-240ENST00000556339 DCAF4Q8WV16 495 aa4.71□□□□□ -1.66
ATXN3-240ENST00000556339 ARHGAP45Q92619 1136 aa4.71□□□□□ -1.66
ATXN3-240ENST00000556339 COA7Q96BR5 231 aa4.71□□□□□ -1.66
ATXN3-240ENST00000556339 ARMC5Q96C12 935 aa4.71□□□□□ -1.66
ATXN3-240ENST00000556339 OR14A2Q96R54 314 aa4.71□□□□□ -1.66
ATXN3-240ENST00000556339 PARK7Q99497 189 aaKnown RBP4.71□□□□□ -1.66
ATXN3-240ENST00000556339 MEIS3Q99687 375 aa4.71□□□□□ -1.66
ATXN3-240ENST00000556339 ALG1Q9BT22 464 aa4.71□□□□□ -1.66
ATXN3-240ENST00000556339 ARHGAP39Q9C0H5 1083 aa4.71□□□□□ -1.66
ATXN3-240ENST00000556339 CDIP1Q9H305 208 aa4.71□□□□□ -1.66
ATXN3-240ENST00000556339 C12orf65Q9H3J6 166 aaKnown RBP4.71□□□□□ -1.66
ATXN3-240ENST00000556339 RWDD1Q9H446 243 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-240ENST00000556339 UPF2Q9HAU5 1272 aaKnown RBP4.71□□□□□ -1.66
ATXN3-240ENST00000556339 ZCCHC17Q9NP64 241 aaKnown RBP4.71□□□□□ -1.66
ATXN3-240ENST00000556339 ST7Q9NRC1 585 aa4.71□□□□□ -1.66
ATXN3-240ENST00000556339 ARHGAP28Q9P2N2 729 aa4.71□□□□□ -1.66
ATXN3-240ENST00000556339 SSC5DA1L4H1 1573 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 TRIOBPQ9H2D6 2365 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 A0A1W2PQU0 124 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 ESYT3A0FGR9 886 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 TRIM75PA6NK02 468 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 FAM47E-STBD1D6RA91 191 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 NKRFO15226 690 aaKnown RBP eCLIP4.7□□□□□ -1.66
ATXN3-240ENST00000556339 PRODHO43272 600 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 DLX3O60479 287 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 CTNND1O60716 968 aaKnown RBP4.7□□□□□ -1.66
ATXN3-240ENST00000556339 CDC14BO60729 498 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 SURF6O75683 361 aaKnown RBP4.7□□□□□ -1.66
ATXN3-240ENST00000556339 BCAR3O75815 825 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 BAG3O95817 575 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 ERCC5P28715 1186 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-240ENST00000556339 MCM7P33993 719 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 MECOMQ03112 1051 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 PTH1RQ03431 593 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 PABPC4Q13310 644 aaKnown RBP eCLIP4.7□□□□□ -1.66
ATXN3-240ENST00000556339 RASGRF1Q13972 1273 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 ZMAT1Q5H9K5 638 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 ZKSCAN2Q63HK3 967 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 NAA16Q6N069 864 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-240ENST00000556339 KCNT2Q6UVM3 1135 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 C17orf99Q6UX52 265 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 ATF7IPQ6VMQ6 1270 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 LBX2Q6XYB7 198 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 FTSJ3Q8IY81 847 aaKnown RBP4.7□□□□□ -1.66
ATXN3-240ENST00000556339 TEX11Q8IYF3 940 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 SCYL3Q8IZE3 742 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 IFNL3Q8IZI9 196 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 FUKQ8N0W3 1084 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 SPATA5Q8NB90 893 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 ZNF333Q96JL9 665 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 AARSD1Q9BTE6 412 aaKnown RBP4.7□□□□□ -1.66
ATXN3-240ENST00000556339 SLC39A2Q9NP94 309 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 ZNF112Q9UJU3 913 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 OAZ3Q9UMX2 235 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 NR2E3Q9Y5X4 410 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 MYPNQ86TC9 1320 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 SALL1Q9NSC2 1324 aa4.7□□□□□ -1.66
ATXN3-240ENST00000556339 GPR75-ASB3A0A0A6YYF3 556 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 DDTLA6NHG4 134 aaPredicted RBP4.69□□□□□ -1.66
ATXN3-240ENST00000556339 TNPO2O14787 897 aaKnown RBP4.69□□□□□ -1.66
ATXN3-240ENST00000556339 ADCY3O60266 1144 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 CUTAO60888 179 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 MAP4K4O95819 1239 aaPredicted RBP4.69□□□□□ -1.66
ATXN3-240ENST00000556339 SOD2P04179 222 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 CCL5P13501 91 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 CR2P20023 1033 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 ACO1P21399 889 aaKnown RBP4.69□□□□□ -1.66
ATXN3-240ENST00000556339 GPR85P60893 370 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 IRX3P78415 501 aaPredicted RBP4.69□□□□□ -1.66
ATXN3-240ENST00000556339 ATP8B2P98198 1209 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 SPP2Q13103 211 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 LSM12Q3MHD2 195 aaKnown RBP4.69□□□□□ -1.66
ATXN3-240ENST00000556339 WDR72Q3MJ13 1102 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 HABP4Q5JVS0 413 aaKnown RBP4.69□□□□□ -1.66
ATXN3-240ENST00000556339 MIIPQ5JXC2 388 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 C20orf194Q5TEA3 1177 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 DPH6Q7L8W6 267 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 POLNQ7Z5Q5 900 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 ITPRIPQ8IWB1 547 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 ANKRD13CQ8N6S4 541 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 WDR48Q8TAF3 677 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 HTATIP2Q9BUP3 242 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 IDI2Q9BXS1 227 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 CD244Q9BZW8 370 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 KATNBL1Q9H079 304 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 OSBPL5Q9H0X9 879 aaPredicted RBP4.69□□□□□ -1.66
ATXN3-240ENST00000556339 AS3MTQ9HBK9 375 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 DDX4Q9NQI0 724 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms