RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 TNFRSF10AO00220 468 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 C2CD2LO14523 706 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 GCNT3O95395 438 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 ADH1AP07327 375 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 CNPP09543 421 aaKnown RBP12.57□□□□□ -0.4
SLIRP-205ENST00000556310 CLCNKBP51801 687 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 CASP5P51878 434 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 ASIC1P78348 528 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 NUCB2P80303 420 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 CREMQ03060 361 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 PPP2R3AQ06190 1150 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 SOX4Q06945 474 aaPredicted RBP12.57□□□□□ -0.4
SLIRP-205ENST00000556310 UPP1Q16831 310 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 L1TD1Q5T7N2 865 aaKnown RBP12.57□□□□□ -0.4
SLIRP-205ENST00000556310 ADALQ6DHV7 355 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 SLFN12LQ6IEE8 588 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 KIAA1841Q6NSI8 718 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 SLC22A17Q8WUG5 538 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 KLHL5Q96PQ7 755 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 ACCSQ96QU6 501 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 C7orf25Q9BPX7 421 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 GOLGA2P5Q9HBQ8 144 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 RXFP1Q9HBX9 757 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.57□□□□□ -0.44e-7■■□□□ 12.6
SLIRP-205ENST00000556310 TBC1D7Q9P0N9 293 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 KCNH3Q9ULD8 1083 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 EXOC7Q9UPT5 735 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 USP15Q9Y4E8 981 aaPredicted RBP12.57□□□□□ -0.4
SLIRP-205ENST00000556310 STYXL1Q9Y6J8 313 aa12.57□□□□□ -0.4
SLIRP-205ENST00000556310 TTC26A0AVF1 554 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 TISP43B9A030 160 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 ANKRD63C9JTQ0 380 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 TEX28O15482 410 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 B3GAT3O94766 335 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 MYBP10242 640 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 PFKFB1P16118 471 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 EPCAMP16422 314 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 CMA1P23946 247 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 KLRC2P26717 231 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 TNFSF9P41273 254 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 CLCN4P51793 760 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 ZP2Q05996 745 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 ENOX2Q16206 610 aaKnown RBP12.56□□□□□ -0.4
SLIRP-205ENST00000556310 ZBTB41Q5SVQ8 909 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 SYCE2Q6PIF2 218 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 DCLRE1AQ6PJP8 1040 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.56□□□□□ -0.4
SLIRP-205ENST00000556310 C3orf58Q8NDZ4 430 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 RIN2Q8WYP3 895 aaPredicted RBP12.56□□□□□ -0.4
SLIRP-205ENST00000556310 PIK3R5Q8WYR1 880 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 SUSD6Q92537 303 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 B3GALT6Q96L58 329 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 TSPAN18Q96SJ8 248 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 TTPALQ9BTX7 342 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 FGFBP2Q9BYJ0 223 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 RPF1Q9H9Y2 349 aaKnown RBP12.56□□□□□ -0.4
SLIRP-205ENST00000556310 CPSF3Q9UKF6 684 aaKnown RBP12.56□□□□□ -0.4
SLIRP-205ENST00000556310 C2orf16Q68DN1 1984 aa12.56□□□□□ -0.4
SLIRP-205ENST00000556310 PODXLO00592 558 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 EIF3DO15371 548 aaKnown RBP eCLIP12.55□□□□□ -0.4
SLIRP-205ENST00000556310 TRAPPC3O43617 180 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 ACTN4O43707 911 aaKnown RBP12.55□□□□□ -0.4
SLIRP-205ENST00000556310 C1RP00736 705 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 ADRB2P07550 413 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 SLFN14P0C7P3 912 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 RPL9P32969 192 aaKnown RBP12.55□□□□□ -0.4
SLIRP-205ENST00000556310 KCNA1Q09470 495 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 POSTNQ15063 836 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 RTP2Q5QGT7 225 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 FAM171A1Q5VUB5 890 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 PDXDC1Q6P996 788 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 CD300LGQ6UXG3 332 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 STXBP4Q6ZWJ1 553 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 UNC13DQ70J99 1090 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 ADHFE1Q8IWW8 467 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 CD302Q8IX05 232 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 CEP57L1Q8IYX8 460 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 POMGNT1Q8WZA1 660 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 C18orf25Q96B23 403 aaPredicted RBP12.55□□□□□ -0.4
SLIRP-205ENST00000556310 FBXL18Q96ME1 805 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 POP1Q99575 1024 aaKnown RBP12.55□□□□□ -0.4
SLIRP-205ENST00000556310 S1PR5Q9H228 398 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 IKZF4Q9H2S9 585 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 FNIP2Q9P278 1114 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 TUBGCP4Q9UGJ1 667 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 USP25Q9UHP3 1055 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 AGO2Q9UKV8 859 aaKnown RBP12.55□□□□□ -0.4
SLIRP-205ENST00000556310 UBQLN1Q9UMX0 589 aaKnown RBP12.55□□□□□ -0.4
SLIRP-205ENST00000556310 HPSEQ9Y251 543 aa12.55□□□□□ -0.4
SLIRP-205ENST00000556310 TSC2P49815 1807 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 FAM237AA0A1B0GTK4 181 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 A0A1B0GVL5 298 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 A0A1W2PQ27 194 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 A0A1W2PQ64 194 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 A0A1W2PQD8 194 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 LACTBL1A8MY62 500 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 XPOTO43592 962 aaKnown RBP12.54□□□□□ -0.4
SLIRP-205ENST00000556310 GLUD1P00367 558 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 CYP3A5P20815 502 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 GARTP22102 1010 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms