RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 GOLGA6L4A6NEF3 574 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 I3L4J1 428 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 KLRC4O43908 158 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 ZNF202O95125 648 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 MYL1P05976 194 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 ADH1AP07327 375 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 NFICP08651 508 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 GARTP22102 1010 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 HOXD13P35453 343 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 BRCC3P46736 316 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 CLCN4P51793 760 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 ZBTB6Q15916 424 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 JADE1Q6IE81 842 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 ARMCX5Q6P1M9 558 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 SYCE2Q6PIF2 218 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 PRSS55Q6UWB4 352 aaPredicted RBP16.51■□□□□ 0.23
ACTN1-217ENST00000556203 CRELD2Q6UXH1 353 aaPredicted RBP16.51■□□□□ 0.23
ACTN1-217ENST00000556203 KRBA2Q6ZNG9 492 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 GPR65Q8IYL9 337 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 ZSWIM2Q8NEG5 633 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 ZNF507Q8TCN5 953 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 SCFD1Q8WVM8 642 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 TSPAN18Q96SJ8 248 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 APOL5Q9BWW9 433 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.51■□□□□ 0.23
ACTN1-217ENST00000556203 EXOC1Q9NV70 894 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.51■□□□□ 0.23
ACTN1-217ENST00000556203 BRWD1Q9NSI6 2320 aa16.51■□□□□ 0.23
ACTN1-217ENST00000556203 UBE4BO95155 1302 aa16.5■□□□□ 0.23
ACTN1-217ENST00000556203 GOLGA8IPA6NC78 632 aa16.5■□□□□ 0.23
ACTN1-217ENST00000556203 GOLGA8JA6NMD2 632 aa16.5■□□□□ 0.23
ACTN1-217ENST00000556203 TULP1O00294 542 aaPredicted RBP16.5■□□□□ 0.23
ACTN1-217ENST00000556203 XPOTO43592 962 aaKnown RBP16.5■□□□□ 0.23
ACTN1-217ENST00000556203 TRAPPC3O43617 180 aa16.5■□□□□ 0.23
ACTN1-217ENST00000556203 PRR29P0C7W0 189 aa16.5■□□□□ 0.23
ACTN1-217ENST00000556203 RPL17P18621 184 aaKnown RBP16.5■□□□□ 0.23
ACTN1-217ENST00000556203 CYP3A5P20815 502 aa16.5■□□□□ 0.23
ACTN1-217ENST00000556203 FGFR3P22607 806 aa16.5■□□□□ 0.23
ACTN1-217ENST00000556203 LRPAP1P30533 357 aa16.5■□□□□ 0.23
ACTN1-217ENST00000556203 GUCY2FP51841 1108 aa16.5■□□□□ 0.23
ACTN1-217ENST00000556203 POU5F1Q01860 360 aaKnown RBP16.5■□□□□ 0.23
ACTN1-217ENST00000556203 KMT5BQ4FZB7 885 aa16.5■□□□□ 0.23
ACTN1-217ENST00000556203 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.5■□□□□ 0.23
ACTN1-217ENST00000556203 NELFCDQ8IXH7 590 aa16.5■□□□□ 0.23
ACTN1-217ENST00000556203 NOC3LQ8WTT2 800 aaKnown RBP16.5■□□□□ 0.23
ACTN1-217ENST00000556203 PCIF1Q9H4Z3 704 aa16.5■□□□□ 0.23
ACTN1-217ENST00000556203 ASB7Q9H672 318 aa16.5■□□□□ 0.23
ACTN1-217ENST00000556203 USP15Q9Y4E8 981 aaPredicted RBP16.5■□□□□ 0.23
ACTN1-217ENST00000556203 NUB1Q9Y5A7 615 aa16.5■□□□□ 0.23
ACTN1-217ENST00000556203 EXTL3O43909 919 aa16.49■□□□□ 0.23
ACTN1-217ENST00000556203 LDHAP00338 332 aaKnown RBP16.49■□□□□ 0.23
ACTN1-217ENST00000556203 HOXB8P17481 243 aaPredicted RBP16.49■□□□□ 0.23
ACTN1-217ENST00000556203 TKTP29401 623 aaKnown RBP16.49■□□□□ 0.23
ACTN1-217ENST00000556203 MCM4P33991 863 aa16.49■□□□□ 0.23
ACTN1-217ENST00000556203 CREMQ03060 361 aa16.49■□□□□ 0.23
ACTN1-217ENST00000556203 TMEM132DQ14C87 1099 aa16.49■□□□□ 0.23
ACTN1-217ENST00000556203 SMAD2Q15796 467 aaKnown RBP16.49■□□□□ 0.23
ACTN1-217ENST00000556203 PSMD5Q16401 504 aa16.49■□□□□ 0.23
ACTN1-217ENST00000556203 SPATA1Q5VX52 437 aa16.49■□□□□ 0.23
ACTN1-217ENST00000556203 GLYCTKQ8IVS8 523 aa16.49■□□□□ 0.23
ACTN1-217ENST00000556203 BEST2Q8NFU1 509 aa16.49■□□□□ 0.23
ACTN1-217ENST00000556203 LNX1Q8TBB1 728 aaPredicted RBP16.49■□□□□ 0.23
ACTN1-217ENST00000556203 PIK3R5Q8WYR1 880 aa16.49■□□□□ 0.23
ACTN1-217ENST00000556203 FBXL18Q96ME1 805 aa16.49■□□□□ 0.23
ACTN1-217ENST00000556203 S1PR5Q9H228 398 aa16.49■□□□□ 0.23
ACTN1-217ENST00000556203 DZANK1Q9NVP4 752 aa16.49■□□□□ 0.23
ACTN1-217ENST00000556203 FNIP2Q9P278 1114 aa16.49■□□□□ 0.23
ACTN1-217ENST00000556203 DERAQ9Y315 318 aa16.49■□□□□ 0.23
ACTN1-217ENST00000556203 KIAA0391O15091 583 aaKnown RBP16.48■□□□□ 0.23
ACTN1-217ENST00000556203 TGFB1I1O43294 461 aa16.48■□□□□ 0.23
ACTN1-217ENST00000556203 IL18RAPO95256 599 aa16.48■□□□□ 0.23
ACTN1-217ENST00000556203 GLUD1P00367 558 aa16.48■□□□□ 0.23
ACTN1-217ENST00000556203 RPN1P04843 607 aaKnown RBP16.48■□□□□ 0.23
ACTN1-217ENST00000556203 STK4Q13043 487 aa16.48■□□□□ 0.23
ACTN1-217ENST00000556203 BMT2Q1RMZ1 405 aa16.48■□□□□ 0.23
ACTN1-217ENST00000556203 PDXDC1Q6P996 788 aa16.48■□□□□ 0.23
ACTN1-217ENST00000556203 PALB2Q86YC2 1186 aa16.48■□□□□ 0.23
ACTN1-217ENST00000556203 BRSK2Q8IWQ3 736 aa16.48■□□□□ 0.23
ACTN1-217ENST00000556203 FMR1NBQ8N0W7 255 aaPredicted RBP16.48■□□□□ 0.23
ACTN1-217ENST00000556203 C12orf76Q8N812 135 aaPredicted RBP16.48■□□□□ 0.23
ACTN1-217ENST00000556203 KIAA0895Q8NCT3 520 aa16.48■□□□□ 0.23
ACTN1-217ENST00000556203 AGPAT3Q9NRZ7 376 aa16.48■□□□□ 0.23
ACTN1-217ENST00000556203 RBAKQ9NYW8 714 aaPredicted RBP16.48■□□□□ 0.23
ACTN1-217ENST00000556203 CHMP5Q9NZZ3 219 aa16.48■□□□□ 0.23
ACTN1-217ENST00000556203 C2CD2Q9Y426 696 aa16.48■□□□□ 0.23
ACTN1-217ENST00000556203 VCANP13611 3396 aa16.48■□□□□ 0.23
ACTN1-217ENST00000556203 SPDYE4A6NLX3 237 aa16.47■□□□□ 0.23
ACTN1-217ENST00000556203 WNT7BP56706 349 aa16.47■□□□□ 0.23
ACTN1-217ENST00000556203 DPYDQ12882 1025 aa16.47■□□□□ 0.23
ACTN1-217ENST00000556203 PSMD2Q13200 908 aa16.47■□□□□ 0.23
ACTN1-217ENST00000556203 KNOP1Q1ED39 458 aaKnown RBP16.47■□□□□ 0.23
ACTN1-217ENST00000556203 RARS2Q5T160 578 aaKnown RBP16.47■□□□□ 0.23
ACTN1-217ENST00000556203 KANK3Q6NY19 840 aa16.47■□□□□ 0.23
ACTN1-217ENST00000556203 EFCAB13Q8IY85 973 aa16.47■□□□□ 0.23
ACTN1-217ENST00000556203 GPD1LQ8N335 351 aa16.47■□□□□ 0.23
ACTN1-217ENST00000556203 SUSD6Q92537 303 aa16.47■□□□□ 0.23
ACTN1-217ENST00000556203 CCDC34Q96HJ3 373 aa16.47■□□□□ 0.23
ACTN1-217ENST00000556203 CLSTN3Q9BQT9 956 aa16.47■□□□□ 0.23
ACTN1-217ENST00000556203 ADAM7Q9H2U9 754 aa16.47■□□□□ 0.23
ACTN1-217ENST00000556203 MAN1C1Q9NR34 630 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms