RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 TCEAL1Q15170 157 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 PKN2Q16513 984 aaKnown RBP15.8■□□□□ 0.12
VPS33B-205ENST00000556096 TEX35Q5T0J7 233 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 ZNF677Q86XU0 584 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 TPCN2Q8NHX9 752 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 RFFLQ8WZ73 363 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 DDX1Q92499 740 aaKnown RBP15.8■□□□□ 0.12
VPS33B-205ENST00000556096 PDZD7Q9H5P4 517 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 RPF1Q9H9Y2 349 aaKnown RBP15.8■□□□□ 0.12
VPS33B-205ENST00000556096 APOBEC3GQ9HC16 384 aaKnown RBP15.8■□□□□ 0.12
VPS33B-205ENST00000556096 SEPT11Q9NVA2 429 aaKnown RBP15.8■□□□□ 0.12
VPS33B-205ENST00000556096 BRCA2P51587 3418 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 TFRCP02786 760 aaKnown RBP15.8■□□□□ 0.12
VPS33B-205ENST00000556096 AKR1A1P14550 325 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 PSEN2P49810 448 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 ADAM17P78536 824 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 FMO1Q01740 532 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 CUL2Q13617 745 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 ZNF572Q7Z3I7 529 aaPredicted RBP15.8■□□□□ 0.12
VPS33B-205ENST00000556096 SLFN11Q7Z7L1 901 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 DNAAF5Q86Y56 855 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 PALB2Q86YC2 1186 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 CREG2Q8IUH2 290 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 LRRC57Q8N9N7 239 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 PCDHB18PQ96TA0 734 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 KATNAL1Q9BW62 490 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 IMPG2Q9BZV3 1241 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 UNC93B1Q9H1C4 597 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 ADAMTS10Q9H324 1103 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 TAS2R14Q9NYV8 317 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 RNF14Q9UBS8 474 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 CNTN6Q9UQ52 1028 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 PCDHB2Q9Y5E7 798 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 KAT6AQ92794 2004 aa15.79■□□□□ 0.12
VPS33B-205ENST00000556096 TMCO5BA8MYB1 307 aa15.79■□□□□ 0.12
VPS33B-205ENST00000556096 ASS1P00966 412 aaKnown RBP15.79■□□□□ 0.12
VPS33B-205ENST00000556096 FTLP02792 175 aaPredicted RBP15.79■□□□□ 0.12
VPS33B-205ENST00000556096 KRT5P13647 590 aa15.79■□□□□ 0.12
VPS33B-205ENST00000556096 H2AFXP16104 143 aaPredicted RBP15.79■□□□□ 0.12
VPS33B-205ENST00000556096 ARF4P18085 180 aaPredicted RBP15.79■□□□□ 0.12
VPS33B-205ENST00000556096 ACO1P21399 889 aaKnown RBP15.79■□□□□ 0.12
VPS33B-205ENST00000556096 HADHBP55084 474 aaKnown RBP15.79■□□□□ 0.12
VPS33B-205ENST00000556096 NOP14P78316 857 aaKnown RBP15.79■□□□□ 0.12
VPS33B-205ENST00000556096 IRX5P78411 483 aaPredicted RBP15.79■□□□□ 0.12
VPS33B-205ENST00000556096 PCBP1Q15365 356 aaKnown RBP eCLIP15.79■□□□□ 0.12
VPS33B-205ENST00000556096 SGSM1Q2NKQ1 1148 aa15.79■□□□□ 0.12
VPS33B-205ENST00000556096 SPOPLQ6IQ16 392 aa15.79■□□□□ 0.12
VPS33B-205ENST00000556096 RHOT2Q8IXI1 618 aa15.79■□□□□ 0.12
VPS33B-205ENST00000556096 SYCE1Q8N0S2 351 aa15.79■□□□□ 0.12
VPS33B-205ENST00000556096 PDCL2Q8N4E4 241 aa15.79■□□□□ 0.12
VPS33B-205ENST00000556096 FAM212AQ96EL1 285 aa15.79■□□□□ 0.12
VPS33B-205ENST00000556096 MMS19Q96T76 1030 aa15.79■□□□□ 0.12
VPS33B-205ENST00000556096 A0A1B0GUA9 196 aa15.78■□□□□ 0.12
VPS33B-205ENST00000556096 ZNF185O15231 689 aa15.78■□□□□ 0.12
VPS33B-205ENST00000556096 NCK2O43639 380 aa15.78■□□□□ 0.12
VPS33B-205ENST00000556096 TSPAN1O60635 241 aa15.78■□□□□ 0.12
VPS33B-205ENST00000556096 KPNA6O60684 536 aa15.78■□□□□ 0.12
VPS33B-205ENST00000556096 DUSP11O75319 330 aaKnown RBP15.78■□□□□ 0.12
VPS33B-205ENST00000556096 CSDE1O75534 798 aaKnown RBP15.78■□□□□ 0.12
VPS33B-205ENST00000556096 ERLIN2O94905 339 aa15.78■□□□□ 0.12
VPS33B-205ENST00000556096 CST3P01034 146 aaPredicted RBP15.78■□□□□ 0.12
VPS33B-205ENST00000556096 TNNC2P02585 160 aa15.78■□□□□ 0.12
VPS33B-205ENST00000556096 MMEP08473 750 aa15.78■□□□□ 0.12
VPS33B-205ENST00000556096 STAG3L1P0CL83 205 aa15.78■□□□□ 0.12
VPS33B-205ENST00000556096 ITIH3Q06033 890 aa15.78■□□□□ 0.12
VPS33B-205ENST00000556096 CDR2LQ86X02 465 aaPredicted RBP15.78■□□□□ 0.12
VPS33B-205ENST00000556096 CEP120Q8N960 986 aa15.78■□□□□ 0.12
VPS33B-205ENST00000556096 SLC35G2Q8TBE7 412 aa15.78■□□□□ 0.12
VPS33B-205ENST00000556096 ELMO3Q96BJ8 720 aa15.78■□□□□ 0.12
VPS33B-205ENST00000556096 ANKRD36BP1Q96IX9 119 aa15.78■□□□□ 0.12
VPS33B-205ENST00000556096 SCLT1Q96NL6 688 aa15.78■□□□□ 0.12
VPS33B-205ENST00000556096 PPP1R16BQ96T49 567 aa15.78■□□□□ 0.12
VPS33B-205ENST00000556096 ARID3AQ99856 593 aa15.78■□□□□ 0.12
VPS33B-205ENST00000556096 GCOM2Q9BZD3 368 aaPredicted RBP15.78■□□□□ 0.12
VPS33B-205ENST00000556096 MTMR12Q9C0I1 747 aa15.78■□□□□ 0.12
VPS33B-205ENST00000556096 THAP2Q9H0W7 228 aa15.78■□□□□ 0.12
VPS33B-205ENST00000556096 ASB7Q9H672 318 aa15.78■□□□□ 0.12
VPS33B-205ENST00000556096 NUB1Q9Y5A7 615 aa15.78■□□□□ 0.12
VPS33B-205ENST00000556096 FRMPD3Q5JV73 1810 aa15.78■□□□□ 0.12
VPS33B-205ENST00000556096 CES2O00748 559 aa15.77■□□□□ 0.12
VPS33B-205ENST00000556096 GPR32O75388 356 aa15.77■□□□□ 0.12
VPS33B-205ENST00000556096 FTCDO95954 541 aa15.77■□□□□ 0.12
VPS33B-205ENST00000556096 MYL3P08590 195 aa15.77■□□□□ 0.12
VPS33B-205ENST00000556096 TMEM191BP0C7N4 346 aa15.77■□□□□ 0.12
VPS33B-205ENST00000556096 GPC5P78333 572 aa15.77■□□□□ 0.12
VPS33B-205ENST00000556096 FSCN1Q16658 493 aaKnown RBP15.77■□□□□ 0.12
VPS33B-205ENST00000556096 TAF3Q5VWG9 929 aa15.77■□□□□ 0.12
VPS33B-205ENST00000556096 EFCAB13Q8IY85 973 aa15.77■□□□□ 0.12
VPS33B-205ENST00000556096 COG1Q8WTW3 980 aa15.77■□□□□ 0.12
VPS33B-205ENST00000556096 FAXDC2Q96IV6 333 aa15.77■□□□□ 0.12
VPS33B-205ENST00000556096 CPB2Q96IY4 423 aa15.77■□□□□ 0.12
VPS33B-205ENST00000556096 CAPZA3Q96KX2 299 aa15.77■□□□□ 0.12
VPS33B-205ENST00000556096 ACP6Q9NPH0 428 aa15.77■□□□□ 0.12
VPS33B-205ENST00000556096 CXCL8P10145 99 aa15.77■□□□□ 0.11
VPS33B-205ENST00000556096 CYP2C9P11712 490 aa15.77■□□□□ 0.11
VPS33B-205ENST00000556096 CCL5P13501 91 aa15.77■□□□□ 0.11
VPS33B-205ENST00000556096 ZSCAN20P17040 1043 aaPredicted RBP15.77■□□□□ 0.11
VPS33B-205ENST00000556096 ABCB4P21439 1286 aa15.77■□□□□ 0.11
VPS33B-205ENST00000556096 OSTNP61366 133 aa15.77■□□□□ 0.11
VPS33B-205ENST00000556096 TFAMQ00059 246 aaKnown RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms