RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 KPNA1P52294 538 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-216ENST00000556083 ZNF135P52742 658 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-216ENST00000556083 EIF3EP60228 445 aaKnown RBP11.28□□□□□ -0.6
ACTN1-216ENST00000556083 TMEM132BQ14DG7 1078 aa11.28□□□□□ -0.6
ACTN1-216ENST00000556083 TAF1CQ15572 869 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-216ENST00000556083 PTPROQ16827 1216 aa11.28□□□□□ -0.6
ACTN1-216ENST00000556083 DAGLAQ9Y4D2 1042 aa11.28□□□□□ -0.6
ACTN1-216ENST00000556083 CFAP65Q6ZU64 1925 aaKnown RBP11.28□□□□□ -0.6
ACTN1-216ENST00000556083 A0A0G2JND7 137 aa11.27□□□□□ -0.6
ACTN1-216ENST00000556083 TTC26A0AVF1 554 aa11.27□□□□□ -0.6
ACTN1-216ENST00000556083 EXTL3O43909 919 aa11.27□□□□□ -0.6
ACTN1-216ENST00000556083 SLC4A1P02730 911 aa11.27□□□□□ -0.6
ACTN1-216ENST00000556083 ATP1A3P13637 1013 aa11.27□□□□□ -0.6
ACTN1-216ENST00000556083 FDFT1P37268 417 aa11.27□□□□□ -0.6
ACTN1-216ENST00000556083 NAB2Q15742 525 aa11.27□□□□□ -0.6
ACTN1-216ENST00000556083 NOTUMQ6P988 496 aa11.27□□□□□ -0.6
ACTN1-216ENST00000556083 CYFIP1Q7L576 1253 aa11.27□□□□□ -0.6
ACTN1-216ENST00000556083 SUGP1Q8IWZ8 645 aaKnown RBP11.27□□□□□ -0.6
ACTN1-216ENST00000556083 ZNF557Q8N988 423 aaPredicted RBP11.27□□□□□ -0.6
ACTN1-216ENST00000556083 COG1Q8WTW3 980 aa11.27□□□□□ -0.6
ACTN1-216ENST00000556083 RAPGEF5Q92565 580 aa11.27□□□□□ -0.6
ACTN1-216ENST00000556083 RNPC3Q96LT9 517 aaKnown RBP11.27□□□□□ -0.6
ACTN1-216ENST00000556083 POTEFA5A3E0 1075 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 POTEIP0CG38 1075 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 FMO5P49326 533 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 AMPD2Q01433 879 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 POTEGQ6S5H5 508 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 POTEEQ6S8J3 1075 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 ANGPTL8Q6UXH0 198 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 ATPAF2Q8N5M1 289 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 UCMAQ8WVF2 138 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 OTUD5Q96G74 571 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 ELAC2Q9BQ52 826 aaKnown RBP11.27□□□□□ -0.61
ACTN1-216ENST00000556083 MXRA8Q9BRK3 442 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 NIF3L1Q9GZT8 377 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 EPC1Q9H2F5 836 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 AIPL1Q9NZN9 384 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 FBXO2Q9UK22 296 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-216ENST00000556083 SNX12Q9UMY4 172 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 MRFAP1Q9Y605 127 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 HSPA1AP0DMV8 641 aaKnown RBP11.27□□□□□ -0.61
ACTN1-216ENST00000556083 HSPA1BP0DMV9 641 aaKnown RBP11.27□□□□□ -0.61
ACTN1-216ENST00000556083 ITGA4P13612 1032 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 HMOX2P30519 316 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 RGS2P41220 211 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 OXCT1P55809 520 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 DMTNQ08495 405 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 AP1B1Q10567 949 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 DGKDQ16760 1214 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 C1orf146Q5VVC0 180 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 AGGF1Q8N302 714 aaeCLIP11.27□□□□□ -0.61
ACTN1-216ENST00000556083 GPRC5AQ8NFJ5 357 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 OSCP1Q8WVF1 389 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 RMDN1Q96DB5 314 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 LBHD1Q9BQE6 289 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-216ENST00000556083 SPON2Q9BUD6 331 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 COLEC11Q9BWP8 271 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 RANBP17Q9H2T7 1088 aaKnown RBP11.27□□□□□ -0.61
ACTN1-216ENST00000556083 GIMAP4Q9NUV9 329 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 RRN3Q9NYV6 651 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 TUBGCP4Q9UGJ1 667 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 ARL2BPQ9Y2Y0 163 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 ZC3H4Q9UPT8 1303 aaKnown RBP11.27□□□□□ -0.61
ACTN1-216ENST00000556083 TADA2AO75478 443 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 LBRQ14739 615 aaKnown RBP11.27□□□□□ -0.61
ACTN1-216ENST00000556083 TRIP13Q15645 432 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-216ENST00000556083 EPHA10Q5JZY3 1008 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 KHDRBS2Q5VWX1 349 aaKnown RBP11.27□□□□□ -0.61
ACTN1-216ENST00000556083 C16orf89Q6UX73 402 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 TRIM69Q86WT6 500 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 EEF2KMTQ96G04 330 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 MROH8Q9H579 483 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 GID8Q9NWU2 228 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 KIF17Q9P2E2 1029 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 TUBE1Q9UJT0 475 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 POLIQ9UNA4 740 aa11.27□□□□□ -0.61
ACTN1-216ENST00000556083 GPR75-ASB3A0A0A6YYF3 556 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 DNAJC6O75061 913 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 LARGE1O95461 756 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 APOA1P02647 267 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 AKR1B1P15121 316 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 NCOA4Q13772 614 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 CDC26Q8NHZ8 85 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 PSMC3IPQ9P2W1 217 aaPredicted RBP11.26□□□□□ -0.61
ACTN1-216ENST00000556083 CDY2AQ9Y6F7 541 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 CDY1Q9Y6F8 540 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 KANSL1LA0AUZ9 987 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 PRAMEF22A3QJZ6 481 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 H0Y626 953 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 ANGPT2O15123 496 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 TRIM16O95361 564 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 CYP2D6P10635 497 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 KCNA4P22459 653 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 ARHGEF7Q14155 803 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 FBXO33Q7Z6M2 555 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 CCNYL1Q8N7R7 359 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 ICA1LQ8NDH6 482 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 RNF25Q96BH1 459 aaPredicted RBP11.26□□□□□ -0.61
ACTN1-216ENST00000556083 AIFM3Q96NN9 605 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 NUDT12Q9BQG2 462 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms