RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 GUCY2CP25092 1073 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 GTF2F1P35269 517 aaKnown RBP eCLIP7.45□□□□□ -1.22
SLIRP-204ENST00000555890 PSMC5P62195 406 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 RBL2Q08999 1139 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 GRB14Q14449 540 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 ANGPT1Q15389 498 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 MAN2A1Q16706 1144 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 EDRF1Q3B7T1 1238 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 CCDC40Q4G0X9 1142 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 PKDCCQ504Y2 493 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 PLA2G2CQ5R387 149 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 PRAMEF19Q5SWL8 479 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 OTUD6AQ7L8S5 288 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 ANKRD33Q7Z3H0 272 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 NCAPG2Q86XI2 1143 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 SFR1Q86XK3 245 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 C4orf19Q8IY42 314 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 SMAP1Q8IYB5 467 aaPredicted RBP7.45□□□□□ -1.22
SLIRP-204ENST00000555890 CCAR2Q8N163 923 aaKnown RBP7.45□□□□□ -1.22
SLIRP-204ENST00000555890 TMEM199Q8N511 208 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 MYCT1Q8N699 235 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 TC2NQ8N9U0 490 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 TTC16Q8NEE8 873 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 ZNF507Q8TCN5 953 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 CPLX3Q8WVH0 158 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 SCFD1Q8WVM8 642 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 DDX1Q92499 740 aaKnown RBP7.45□□□□□ -1.22
SLIRP-204ENST00000555890 DHX38Q92620 1227 aaKnown RBP7.45□□□□□ -1.22
SLIRP-204ENST00000555890 VWCEQ96DN2 955 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 INPP4AQ96PE3 977 aaPredicted RBP7.45□□□□□ -1.22
SLIRP-204ENST00000555890 RUSC1Q9BVN2 902 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 TIPINQ9BVW5 301 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 MOV10L1Q9BXT6 1211 aaKnown RBP7.45□□□□□ -1.22
SLIRP-204ENST00000555890 SPATC1LQ9H0A9 340 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 TMX1Q9H3N1 280 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 MRPL44Q9H9J2 332 aaKnown RBP7.45□□□□□ -1.22
SLIRP-204ENST00000555890 PARVGQ9HBI0 331 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 OLFML3Q9NRN5 406 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 ANKEF1Q9NU02 776 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 DDX41Q9UJV9 622 aaKnown RBP7.45□□□□□ -1.22
SLIRP-204ENST00000555890 TBX21Q9UL17 535 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 HRH3Q9Y5N1 445 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 SLC4A7Q9Y6M7 1214 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 RELNP78509 3460 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 UBE4BO95155 1302 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 LCTP09848 1927 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 GOLGA6L9A6NEM1 432 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 PDXKO00764 312 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 EIF1AYO14602 144 aaKnown RBP7.44□□□□□ -1.22
SLIRP-204ENST00000555890 EIF3DO15371 548 aaKnown RBP eCLIP7.44□□□□□ -1.22
SLIRP-204ENST00000555890 SEPT4O43236 478 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 MFAP3LO75121 409 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 GCNT3O95395 438 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 PSAPP07602 524 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 CTSHP09668 335 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 MAPTP10636 758 aaKnown RBP7.44□□□□□ -1.22
SLIRP-204ENST00000555890 CSF2RAP15509 400 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 CASP14P31944 242 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 ICAM3P32942 547 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 ADKP55263 362 aaKnown RBP7.44□□□□□ -1.22
SLIRP-204ENST00000555890 CLN3Q13286 438 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 ADAM9Q13443 819 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 ALCAMQ13740 583 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 PTPN14Q15678 1187 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 KNOP1Q1ED39 458 aaKnown RBP7.44□□□□□ -1.22
SLIRP-204ENST00000555890 BMT2Q1RMZ1 405 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 VWA3BQ502W6 1294 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 ZCWPW2Q504Y3 356 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 MIS18BP1Q6P0N0 1132 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 EPM2AIP1Q7L775 607 aaPredicted RBP7.44□□□□□ -1.22
SLIRP-204ENST00000555890 NELFCDQ8IXH7 590 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 ZNF397Q8NF99 534 aaPredicted RBP7.44□□□□□ -1.22
SLIRP-204ENST00000555890 ZDHHC1Q8WTX9 485 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 ZCCHC14Q8WYQ9 949 aaKnown RBP7.44□□□□□ -1.22
SLIRP-204ENST00000555890 ATP6V0A1Q93050 837 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 TOX2Q96NM4 488 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 PAGR1Q9BTK6 254 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 KCTD10Q9H3F6 313 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 MROH8Q9H579 483 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 TYW1Q9NV66 732 aaKnown RBP7.44□□□□□ -1.22
SLIRP-204ENST00000555890 KLK14Q9P0G3 267 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 BTBD7Q9P203 1132 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 LARSQ9P2J5 1176 aaKnown RBP7.44□□□□□ -1.22
SLIRP-204ENST00000555890 FAM184BQ9ULE4 1060 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 TRAF3IP3Q9Y228 551 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 INPP5FQ9Y2H2 1132 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 LUC7L2Q9Y383 392 aaKnown RBP7.44□□□□□ -1.22
SLIRP-204ENST00000555890 PCDHA10Q9Y5I2 948 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 R4GN57 208 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 DOCK5Q9H7D0 1870 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 POLQO75417 2590 aa7.44□□□□□ -1.22
SLIRP-204ENST00000555890 DMXL2Q8TDJ6 3036 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 RSPH10B2B2RC85 870 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 SLC30A4O14863 429 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 PQBP1O60828 265 aaKnown RBP7.43□□□□□ -1.22
SLIRP-204ENST00000555890 ATP9AO75110 1047 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 RSPH10BP0C881 870 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 TNNT1P13805 278 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 KCNA2P16389 499 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 EIF4BP23588 611 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms