RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 FAM227AF5H4B4 570 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 FOXS1O43638 330 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 CAND2O75155 1236 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 ITGB3P05106 788 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 SNRPA1P09661 255 aaKnown RBP4.28□□□□□ -1.72
SRP54-209ENST00000555746 FTH1P19P0C7X4 201 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 SYN1P17600 705 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 HOXA5P20719 270 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 MALP21145 153 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 ALDH1A3P47895 512 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 USP14P54578 494 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 NKX6-1P78426 367 aaPredicted RBP4.28□□□□□ -1.72
SRP54-209ENST00000555746 FOXL1Q12952 345 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 GALEQ14376 348 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 KHDC1Q4VXA5 237 aaKnown RBP4.28□□□□□ -1.72
SRP54-209ENST00000555746 AFMIDQ63HM1 303 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 GLB1LQ6UWU2 654 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 POLNQ7Z5Q5 900 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 RSPH3Q86UC2 560 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 KIAA0319LQ8IZA0 1049 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 CAMKK1Q8N5S9 505 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 DCBLD1Q8N8Z6 715 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 PPP1R35Q8TAP8 253 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 CDK5RAP3Q96JB5 506 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 OR14A2Q96R54 314 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 LSM14BQ9BX40 385 aaKnown RBP4.28□□□□□ -1.72
SRP54-209ENST00000555746 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 MAN1C1Q9NR34 630 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 CNOT11Q9UKZ1 510 aaKnown RBP4.28□□□□□ -1.72
SRP54-209ENST00000555746 STXBP5LQ9Y2K9 1186 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 SH3BP1Q9Y3L3 701 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 ACTL7AQ9Y615 435 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 MAGI2Q86UL8 1455 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 RGS12O14924 1447 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 FHOD3Q2V2M9 1422 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 EP400Q96L91 3159 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 FRMPD2Q68DX3 1309 aaPredicted RBP4.27□□□□□ -1.73
SRP54-209ENST00000555746 A6NNZ2 444 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 NT5C1B-RDH14C9J2C7 533 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 IPO13O94829 963 aaKnown RBP4.27□□□□□ -1.73
SRP54-209ENST00000555746 ZBED1O96006 694 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 HTR1BP28222 390 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 CLRN1P58418 232 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 ZNF280AP59817 542 aaPredicted RBP4.27□□□□□ -1.73
SRP54-209ENST00000555746 SNAPC2Q13487 334 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 ATP2B3Q16720 1220 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 BMT2Q1RMZ1 405 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 FAM214AQ32MH5 1076 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 ANO6Q4KMQ2 910 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 GADL1Q6ZQY3 521 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 TTLL10Q6ZVT0 673 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 LIMS2Q7Z4I7 341 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 FAM83AQ86UY5 434 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 MDGA1Q8NFP4 955 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 FBXO18Q8NFZ0 1043 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 SLC35B2Q8TB61 432 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 KLHDC4Q8TBB5 520 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 STON2Q8WXE9 905 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 RAB24Q969Q5 203 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 VRK1Q99986 396 aaPredicted RBP4.27□□□□□ -1.73
SRP54-209ENST00000555746 WDCPQ9H6R7 721 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 FAM204AQ9H8W3 233 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 DDX21Q9NR30 783 aaKnown RBP eCLIP4.27□□□□□ -1.73
SRP54-209ENST00000555746 SIDT1Q9NXL6 827 aaKnown RBP4.27□□□□□ -1.73
SRP54-209ENST00000555746 SLC23A1Q9UHI7 598 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 CLCA2Q9UQC9 943 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 NR2E3Q9Y5X4 410 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 JCADQ9P266 1359 aa4.27□□□□□ -1.73
SRP54-209ENST00000555746 ZMYM4Q5VZL5 1548 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 ZFYVE16Q7Z3T8 1539 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 LRRC14BA6NHZ5 514 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 TPP1O14773 563 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 MFAP3LO75121 409 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 RAP2AP10114 183 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 TYRP14679 529 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 ATP5JP18859 108 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 MSX2P35548 267 aaPredicted RBP4.26□□□□□ -1.73
SRP54-209ENST00000555746 RBM6P78332 1123 aaKnown RBP4.26□□□□□ -1.73
SRP54-209ENST00000555746 PURAQ00577 322 aaKnown RBP4.26□□□□□ -1.73
SRP54-209ENST00000555746 PABPC1LQ4VXU2 614 aaKnown RBP4.26□□□□□ -1.73
SRP54-209ENST00000555746 DCAF17Q5H9S7 520 aaPredicted RBP4.26□□□□□ -1.73
SRP54-209ENST00000555746 ANKS6Q68DC2 871 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 DRICH1Q6PGQ1 229 aaPredicted RBP4.26□□□□□ -1.73
SRP54-209ENST00000555746 SLC4A10Q6U841 1118 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 MAMDC4Q6UXC1 1216 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 NPNTQ6UXI9 565 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 Q6ZSN1 163 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 HTR3DQ70Z44 454 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 HEATR3Q7Z4Q2 680 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 D2HGDHQ8N465 521 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 IL17RDQ8NFM7 739 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 OR52N2Q8NGI0 321 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 PLBD2Q8NHP8 589 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 Q8TCH9 128 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 ST8SIA2Q92186 375 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 TTC17Q96AE7 1141 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 MIEF2Q96C03 454 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 TMEM176AQ96HP8 235 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 C20orf173Q96LM9 149 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 MRI1Q9BV20 369 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms