RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 RSPO2Q6UXX9 243 aaPredicted RBP14.89□□□□□ -0.03
SNX6-203ENST00000555416 PALB2Q86YC2 1186 aa14.89□□□□□ -0.03
SNX6-203ENST00000555416 ADHFE1Q8IWW8 467 aa14.89□□□□□ -0.03
SNX6-203ENST00000555416 TMEM87AQ8NBN3 555 aa14.89□□□□□ -0.03
SNX6-203ENST00000555416 PIK3R5Q8WYR1 880 aa14.89□□□□□ -0.03
SNX6-203ENST00000555416 HVCN1Q96D96 273 aa14.89□□□□□ -0.03
SNX6-203ENST00000555416 FAM212AQ96EL1 285 aa14.89□□□□□ -0.03
SNX6-203ENST00000555416 KIF12Q96FN5 646 aa14.89□□□□□ -0.03
SNX6-203ENST00000555416 FAM84AQ96KN4 292 aa14.89□□□□□ -0.03
SNX6-203ENST00000555416 FBXL18Q96ME1 805 aa14.89□□□□□ -0.03
SNX6-203ENST00000555416 UROC1Q96N76 676 aa14.89□□□□□ -0.03
SNX6-203ENST00000555416 CLSTN3Q9BQT9 956 aa14.89□□□□□ -0.03
SNX6-203ENST00000555416 RPF1Q9H9Y2 349 aaKnown RBP14.89□□□□□ -0.03
SNX6-203ENST00000555416 PLEKHA5Q9HAU0 1116 aa14.89□□□□□ -0.03
SNX6-203ENST00000555416 SLC38A7Q9NVC3 462 aa14.89□□□□□ -0.03
SNX6-203ENST00000555416 AGO2Q9UKV8 859 aaKnown RBP14.89□□□□□ -0.03
SNX6-203ENST00000555416 ANK1P16157 1881 aa14.89□□□□□ -0.03
SNX6-203ENST00000555416 FAM237AA0A1B0GTK4 181 aa14.88□□□□□ -0.03
SNX6-203ENST00000555416 NFICP08651 508 aa14.88□□□□□ -0.03
SNX6-203ENST00000555416 SLFN14P0C7P3 912 aa14.88□□□□□ -0.03
SNX6-203ENST00000555416 HOXB8P17481 243 aaPredicted RBP14.88□□□□□ -0.03
SNX6-203ENST00000555416 LILRA6Q6PI73 481 aa14.88□□□□□ -0.03
SNX6-203ENST00000555416 TMC5Q6UXY8 1006 aa14.88□□□□□ -0.03
SNX6-203ENST00000555416 EPM2AIP1Q7L775 607 aaPredicted RBP14.88□□□□□ -0.03
SNX6-203ENST00000555416 GJD3Q8N144 294 aa14.88□□□□□ -0.03
SNX6-203ENST00000555416 POMGNT1Q8WZA1 660 aa14.88□□□□□ -0.03
SNX6-203ENST00000555416 SAAL1Q96ER3 474 aa14.88□□□□□ -0.03
SNX6-203ENST00000555416 DDX27Q96GQ7 796 aaKnown RBP14.88□□□□□ -0.03
SNX6-203ENST00000555416 PAGE5Q96GU1 130 aa14.88□□□□□ -0.03
SNX6-203ENST00000555416 CBWD1Q9BRT8 395 aa14.88□□□□□ -0.03
SNX6-203ENST00000555416 ADAM7Q9H2U9 754 aa14.88□□□□□ -0.03
SNX6-203ENST00000555416 FNIP2Q9P278 1114 aa14.88□□□□□ -0.03
SNX6-203ENST00000555416 PCDHB13Q9Y5F0 798 aa14.88□□□□□ -0.03
SNX6-203ENST00000555416 GOLGA8IPA6NC78 632 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 GOLGA8JA6NMD2 632 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 TGM5O43548 720 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 KLRC4O43908 158 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 ADH1AP07327 375 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 SRGAP2BP0DMP2 458 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 SP100P23497 879 aaPredicted RBP14.87□□□□□ -0.03
SNX6-203ENST00000555416 SSTR3P32745 418 aaPredicted RBP14.87□□□□□ -0.03
SNX6-203ENST00000555416 ABCD1P33897 745 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 AMPD3Q01432 767 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 PPP2R3AQ06190 1150 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 CBX2Q14781 532 aaPredicted RBP14.87□□□□□ -0.03
SNX6-203ENST00000555416 PSMD5Q16401 504 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 FAM26FQ5R3K3 315 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 SCARA3Q6AZY7 606 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 SLFN12LQ6IEE8 588 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.87□□□□□ -0.03
SNX6-203ENST00000555416 UNC13DQ70J99 1090 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 PPFIBP1Q86W92 1011 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 GPR65Q8IYL9 337 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 FAM213AQ9BRX8 229 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 LRRC27Q9C0I9 530 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 PCIF1Q9H4Z3 704 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 POMKQ9H5K3 350 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 EPHX3Q9H6B9 360 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 MAGEF1Q9HAY2 307 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 MAN1C1Q9NR34 630 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 DZANK1Q9NVP4 752 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 PRKAG3Q9UGI9 489 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 FAM50BQ9Y247 325 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 SSX2IPQ9Y2D8 614 aa14.87□□□□□ -0.03
SNX6-203ENST00000555416 RFPL2O75678 378 aa14.86□□□□□ -0.03
SNX6-203ENST00000555416 GLUD1P00367 558 aa14.86□□□□□ -0.03
SNX6-203ENST00000555416 PRR29P0C7W0 189 aa14.86□□□□□ -0.03
SNX6-203ENST00000555416 LRPAP1P30533 357 aa14.86□□□□□ -0.03
SNX6-203ENST00000555416 RPL9P32969 192 aaKnown RBP14.86□□□□□ -0.03
SNX6-203ENST00000555416 ELAVL2Q12926 359 aaKnown RBP14.86□□□□□ -0.03
SNX6-203ENST00000555416 ALCAMQ13740 583 aa14.86□□□□□ -0.03
SNX6-203ENST00000555416 KYAT1Q16773 422 aa14.86□□□□□ -0.03
SNX6-203ENST00000555416 EFCAB13Q8IY85 973 aa14.86□□□□□ -0.03
SNX6-203ENST00000555416 SYCP3Q8IZU3 236 aa14.86□□□□□ -0.03
SNX6-203ENST00000555416 FSIP1Q8NA03 581 aa14.86□□□□□ -0.03
SNX6-203ENST00000555416 SCFD1Q8WVM8 642 aa14.86□□□□□ -0.03
SNX6-203ENST00000555416 PHF7Q9BWX1 381 aaPredicted RBP14.86□□□□□ -0.03
SNX6-203ENST00000555416 SCAND2PQ9GZW5 306 aaPredicted RBP14.86□□□□□ -0.03
SNX6-203ENST00000555416 SLC39A2Q9NP94 309 aa14.86□□□□□ -0.03
SNX6-203ENST00000555416 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.86□□□□□ -0.03
SNX6-203ENST00000555416 EXOC7Q9UPT5 735 aa14.86□□□□□ -0.03
SNX6-203ENST00000555416 ATP6V1DQ9Y5K8 247 aa14.86□□□□□ -0.03
SNX6-203ENST00000555416 LOC730098B7Z3J9 87 aa14.85□□□□□ -0.03
SNX6-203ENST00000555416 SPTLC1O15269 473 aa14.85□□□□□ -0.03
SNX6-203ENST00000555416 TGFB1I1O43294 461 aa14.85□□□□□ -0.03
SNX6-203ENST00000555416 NUCB2P80303 420 aa14.85□□□□□ -0.03
SNX6-203ENST00000555416 ITIH3Q06033 890 aa14.85□□□□□ -0.03
SNX6-203ENST00000555416 SPATA1Q5VX52 437 aa14.85□□□□□ -0.03
SNX6-203ENST00000555416 NELFCDQ8IXH7 590 aa14.85□□□□□ -0.03
SNX6-203ENST00000555416 CEP57L1Q8IYX8 460 aa14.85□□□□□ -0.03
SNX6-203ENST00000555416 ZNF507Q8TCN5 953 aa14.85□□□□□ -0.03
SNX6-203ENST00000555416 ZNF707Q96C28 371 aaPredicted RBP14.85□□□□□ -0.03
SNX6-203ENST00000555416 RPGRIP1Q96KN7 1286 aa14.85□□□□□ -0.03
SNX6-203ENST00000555416 SUSD3Q96L08 255 aa14.85□□□□□ -0.03
SNX6-203ENST00000555416 MTRRQ9UBK8 725 aa14.85□□□□□ -0.03
SNX6-203ENST00000555416 UBQLN1Q9UMX0 589 aaKnown RBP14.85□□□□□ -0.03
SNX6-203ENST00000555416 C2orf16Q68DN1 1984 aa14.85□□□□□ -0.03
SNX6-203ENST00000555416 PVALEFA0A1B0GWK0 134 aa14.84□□□□□ -0.03
SNX6-203ENST00000555416 A0A1W2PQ27 194 aa14.84□□□□□ -0.03
SNX6-203ENST00000555416 A0A1W2PQ64 194 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms