RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 EIF4A3P38919 411 aaKnown RBP10.98□□□□□ -0.65
NEK9-205ENST00000555405 TBX2Q13207 712 aaPredicted RBP10.98□□□□□ -0.65
NEK9-205ENST00000555405 ABI1Q8IZP0 508 aa10.98□□□□□ -0.65
NEK9-205ENST00000555405 ADAMTS1Q9UHI8 967 aa10.98□□□□□ -0.65
NEK9-205ENST00000555405 ZKSCAN5Q9Y2L8 839 aa10.98□□□□□ -0.65
NEK9-205ENST00000555405 SNX9Q9Y5X1 595 aa10.98□□□□□ -0.65
NEK9-205ENST00000555405 CYP26A1O43174 497 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 PROZP22891 400 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 NOP14P78316 857 aaKnown RBP10.97□□□□□ -0.65
NEK9-205ENST00000555405 FAAP100Q0VG06 881 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 TRIM14Q14142 442 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 TMEM270Q6UE05 265 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 ZSCAN30Q86W11 494 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 IFNLR1Q8IU57 520 aaPredicted RBP10.97□□□□□ -0.65
NEK9-205ENST00000555405 HACE1Q8IYU2 909 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 PRKAG2Q9UGJ0 569 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 LOXHD1Q8IVV2 1947 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 ARID2Q68CP9 1835 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 I3L4J1 428 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 VNN1O95497 513 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 C4BPAP04003 597 aaKnown RBP10.97□□□□□ -0.65
NEK9-205ENST00000555405 HOXC8P31273 242 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 STAT1P42224 750 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 GATMP50440 423 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 ZACNQ401N2 412 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 UBXN11Q5T124 520 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 TOGARAM2Q6ZUX3 1019 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 C1orf127Q8N9H9 656 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 CEP72Q9P209 647 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 ZMYND8Q9ULU4 1186 aaPredicted RBP10.97□□□□□ -0.65
NEK9-205ENST00000555405 PRG3Q9Y2Y8 225 aaPredicted RBP10.97□□□□□ -0.65
NEK9-205ENST00000555405 NUB1Q9Y5A7 615 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 TIMM13Q9Y5L4 95 aaPredicted RBP10.97□□□□□ -0.65
NEK9-205ENST00000555405 SMIM28A0A1B0GU29 152 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 NBNO60934 754 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 GRM5P41594 1212 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 CCZ1BP86790 482 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 CCZ1P86791 482 aaPredicted RBP10.97□□□□□ -0.65
NEK9-205ENST00000555405 SPOUT1Q5T280 376 aaKnown RBP10.97□□□□□ -0.65
NEK9-205ENST00000555405 PDXDC1Q6P996 788 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 FOXR2Q6PJQ5 311 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 RAD9BQ6WBX8 426 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 OTOP2Q7RTS6 562 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 KIAA1328Q86T90 577 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 SMG8Q8ND04 991 aaKnown RBP10.97□□□□□ -0.65
NEK9-205ENST00000555405 HELQQ8TDG4 1101 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 DPF3Q92784 378 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 C16orf45Q96MC5 204 aaPredicted RBP10.97□□□□□ -0.65
NEK9-205ENST00000555405 HAUS4Q9H6D7 363 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 PLCB1Q9NQ66 1216 aa10.97□□□□□ -0.65
NEK9-205ENST00000555405 USP27XA6NNY8 438 aa10.96□□□□□ -0.65
NEK9-205ENST00000555405 CSF2RAP15509 400 aa10.96□□□□□ -0.65
NEK9-205ENST00000555405 SCP2P22307 547 aa10.96□□□□□ -0.65
NEK9-205ENST00000555405 IGFBP6P24592 240 aaPredicted RBP10.96□□□□□ -0.65
NEK9-205ENST00000555405 AXLP30530 894 aa10.96□□□□□ -0.65
NEK9-205ENST00000555405 CDK7P50613 346 aa10.96□□□□□ -0.65
NEK9-205ENST00000555405 MFAP3P55082 362 aa10.96□□□□□ -0.65
NEK9-205ENST00000555405 SURF1Q15526 300 aa10.96□□□□□ -0.65
NEK9-205ENST00000555405 TRIM71Q2Q1W2 868 aaKnown RBP10.96□□□□□ -0.65
NEK9-205ENST00000555405 ZNF667Q5HYK9 610 aa10.96□□□□□ -0.65
NEK9-205ENST00000555405 WDR49Q8IV35 697 aa10.96□□□□□ -0.65
NEK9-205ENST00000555405 BEST2Q8NFU1 509 aa10.96□□□□□ -0.65
NEK9-205ENST00000555405 ARMC5Q96C12 935 aa10.96□□□□□ -0.65
NEK9-205ENST00000555405 HPDLQ96IR7 371 aa10.96□□□□□ -0.65
NEK9-205ENST00000555405 GANQ9H2C0 597 aa10.96□□□□□ -0.65
NEK9-205ENST00000555405 ERVK-5Q9HDB9 667 aa10.96□□□□□ -0.65
NEK9-205ENST00000555405 MIOSQ9NXC5 875 aa10.96□□□□□ -0.65
NEK9-205ENST00000555405 A0A0U1RQJ8 604 aa10.96□□□□□ -0.66
NEK9-205ENST00000555405 IL18RAPO95256 599 aa10.96□□□□□ -0.66
NEK9-205ENST00000555405 PBX3P40426 434 aa10.96□□□□□ -0.66
NEK9-205ENST00000555405 BCAR1P56945 870 aa10.96□□□□□ -0.66
NEK9-205ENST00000555405 MGAT3Q09327 533 aa10.96□□□□□ -0.66
NEK9-205ENST00000555405 PTPROQ16827 1216 aa10.96□□□□□ -0.66
NEK9-205ENST00000555405 CYP26C1Q6V0L0 522 aa10.96□□□□□ -0.66
NEK9-205ENST00000555405 PASD1Q8IV76 773 aa10.96□□□□□ -0.66
NEK9-205ENST00000555405 ATRIPQ8WXE1 791 aa10.96□□□□□ -0.66
NEK9-205ENST00000555405 NHEJ1Q9H9Q4 299 aaPredicted RBP10.96□□□□□ -0.66
NEK9-205ENST00000555405 APOBEC3GQ9HC16 384 aaKnown RBP10.96□□□□□ -0.66
NEK9-205ENST00000555405 SIX2Q9NPC8 291 aa10.96□□□□□ -0.66
NEK9-205ENST00000555405 RANBP2P49792 3224 aaKnown RBP10.96□□□□□ -0.66
NEK9-205ENST00000555405 MEFVO15553 781 aaPredicted RBP10.96□□□□□ -0.66
NEK9-205ENST00000555405 FAM189A1O60320 539 aa10.96□□□□□ -0.66
NEK9-205ENST00000555405 PDGFRBP09619 1106 aa10.96□□□□□ -0.66
NEK9-205ENST00000555405 PTPN11Q06124 597 aaPredicted RBP10.96□□□□□ -0.66
NEK9-205ENST00000555405 GFPT1Q06210 699 aaPredicted RBP10.96□□□□□ -0.66
NEK9-205ENST00000555405 C7orf61Q8IZ16 206 aa10.96□□□□□ -0.66
NEK9-205ENST00000555405 SEPT8Q92599 483 aa10.96□□□□□ -0.66
NEK9-205ENST00000555405 FAM193BQ96PV7 902 aaPredicted RBP10.96□□□□□ -0.66
NEK9-205ENST00000555405 RSAD1Q9HA92 442 aa10.96□□□□□ -0.66
NEK9-205ENST00000555405 ITIH6Q6UXX5 1313 aa10.95□□□□□ -0.66
NEK9-205ENST00000555405 NT5C1B-RDH14C9J2C7 533 aa10.95□□□□□ -0.66
NEK9-205ENST00000555405 EVI5O60447 810 aa10.95□□□□□ -0.66
NEK9-205ENST00000555405 CLTBP09497 229 aa10.95□□□□□ -0.66
NEK9-205ENST00000555405 TNFAIP3P21580 790 aa10.95□□□□□ -0.66
NEK9-205ENST00000555405 MNX1P50219 401 aaPredicted RBP10.95□□□□□ -0.66
NEK9-205ENST00000555405 TNNC1P63316 161 aa10.95□□□□□ -0.66
NEK9-205ENST00000555405 NKX3-2P78367 333 aa10.95□□□□□ -0.66
NEK9-205ENST00000555405 SPA17Q15506 151 aa10.95□□□□□ -0.66
NEK9-205ENST00000555405 RTN4RL1Q86UN2 441 aaPredicted RBP10.95□□□□□ -0.66
NEK9-205ENST00000555405 CAGE1Q8TC20 777 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms