RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 K7ENM7 598 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 ZBTB39O15060 712 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 WDR46O15213 610 aaKnown RBP11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 PLS3P13797 630 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 BRAFP15056 766 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 RAB27AP51159 221 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 ZNF211Q13398 564 aaPredicted RBP11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 COG2Q14746 738 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 CBWD6Q4V339 395 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 CBWD3Q5JTY5 395 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 CBWD5Q5RIA9 395 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 PCNX4Q63HM2 1172 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 TTC27Q6P3X3 843 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 ECHDC2Q86YB7 292 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 BBOF1Q8ND07 529 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 GRK7Q8WTQ7 553 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 CD101Q93033 1021 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 ARHGEF26Q96DR7 871 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 RMDN2Q96LZ7 410 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 TRAPPC9Q96Q05 1148 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 CCDC77Q9BR77 488 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 FOXP3Q9BZS1 431 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 THAP2Q9H0W7 228 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 AGO4Q9HCK5 861 aaKnown RBP11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 PAPOLBQ9NRJ5 636 aaKnown RBP11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 STK32BQ9NY57 414 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 USP20Q9Y2K6 914 aa11.39□□□□□ -0.59
MTHFD1-210ENST00000555252 RAD17O75943 681 aa11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 ITGB5P18084 799 aa11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 ABCB4P21439 1286 aa11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 QARSP47897 775 aaKnown RBP11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 MCCD1P59942 119 aaPredicted RBP11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 GPC5P78333 572 aa11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 STAT4Q14765 748 aa11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 LRRC14Q15048 493 aa11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 ZRSR2Q15696 482 aaKnown RBP11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 LONRF1Q17RB8 773 aa11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 CGB2Q6NT52 195 aa11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 CHADLQ6NUI6 762 aa11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 DNAAF5Q86Y56 855 aa11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 DAW1Q8N136 415 aa11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 RBBP8NLQ8NC74 664 aaPredicted RBP11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 RNF217Q8TC41 542 aa11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 ZNF398Q8TD17 642 aa11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 PARD3BQ8TEW8 1205 aa11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 UTP4Q969X6 686 aaKnown RBP11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 AGPAT1Q99943 283 aa11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 PITPNM3Q9BZ71 974 aa11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 GPR88Q9GZN0 384 aa11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 TLE6Q9H808 572 aa11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 DCLRE1BQ9H816 532 aa11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 KCNK9Q9NPC2 374 aa11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 KCNH7Q9NS40 1196 aa11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 COG5Q9UP83 839 aa11.38□□□□□ -0.59
MTHFD1-210ENST00000555252 ENO4A6NNW6 628 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 ABHD2P08910 425 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 TRIM49P0CI25 452 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 TRIM49CP0CI26 452 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 FDX1P10109 184 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 GZMAP12544 262 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 TAC1P20366 129 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 PCK1P35558 622 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 COPB2P35606 906 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 VAMP7P51809 220 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 RAD23BP54727 409 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 MXRA7P84157 204 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 MGAT5Q09328 741 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 SIX1Q15475 284 aaPredicted RBP11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 ZYXQ15942 572 aaKnown RBP11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 TKFCQ3LXA3 575 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 MTHFD1LQ6UB35 978 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 SLC30A10Q6XR72 485 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 ADAT2Q7Z6V5 191 aaKnown RBP11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 VSIG1Q86XK7 387 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 CLEC4DQ8WXI8 215 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 ZBTB10Q96DT7 871 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 SNF8Q96H20 258 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 LRRC37BQ96QE4 947 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 PPCSQ9HAB8 311 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 SAR1AQ9NR31 198 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 FBXO28Q9NVF7 368 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 TMOD4Q9NZQ9 345 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 STOML1Q9UBI4 398 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 LNPEPQ9UIQ6 1025 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 ZNRF3Q9ULT6 936 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 EXOC7Q9UPT5 735 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 ZNF536O15090 1300 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 DPPA5A6NC42 116 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 DHX15O43143 795 aaKnown RBP11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 SORBS3O60504 671 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 SMIM24O75264 130 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 RTN3O95197 1032 aaPredicted RBP11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 SSR1P43307 286 aaKnown RBP11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 RARRES1P49788 294 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 JAK3P52333 1124 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 GTF2BQ00403 316 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 RNASELQ05823 741 aaKnown RBP11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 PTK6Q13882 451 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 SLC5A9Q2M3M2 681 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 SESTD1Q86VW0 696 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms