RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 B3GAT3O94766 335 aa11.5□□□□□ -0.57
TMEM260-206ENST00000555046 ALADP13716 330 aa11.5□□□□□ -0.57
TMEM260-206ENST00000555046 ACOT2P49753 483 aa11.5□□□□□ -0.57
TMEM260-206ENST00000555046 AFF1P51825 1210 aaKnown RBP11.5□□□□□ -0.57
TMEM260-206ENST00000555046 COBLL1Q53SF7 1204 aa11.5□□□□□ -0.57
TMEM260-206ENST00000555046 KIAA1841Q6NSI8 718 aa11.5□□□□□ -0.57
TMEM260-206ENST00000555046 SLC39A4Q6P5W5 647 aa11.5□□□□□ -0.57
TMEM260-206ENST00000555046 PDXDC1Q6P996 788 aa11.5□□□□□ -0.57
TMEM260-206ENST00000555046 SLC9A9Q8IVB4 645 aa11.5□□□□□ -0.57
TMEM260-206ENST00000555046 GJD3Q8N144 294 aa11.5□□□□□ -0.57
TMEM260-206ENST00000555046 VPS52Q8N1B4 723 aa11.5□□□□□ -0.57
TMEM260-206ENST00000555046 CEP120Q8N960 986 aa11.5□□□□□ -0.57
TMEM260-206ENST00000555046 XXYLT1Q8NBI6 393 aa11.5□□□□□ -0.57
TMEM260-206ENST00000555046 GDPD5Q8WTR4 605 aa11.5□□□□□ -0.57
TMEM260-206ENST00000555046 CDCA3Q99618 268 aaPredicted RBP11.5□□□□□ -0.57
TMEM260-206ENST00000555046 NSUN3Q9H649 340 aaKnown RBP11.5□□□□□ -0.57
TMEM260-206ENST00000555046 FRMD4BQ9Y2L6 1034 aa11.5□□□□□ -0.57
TMEM260-206ENST00000555046 C2CD2Q9Y426 696 aa11.5□□□□□ -0.57
TMEM260-206ENST00000555046 MICAL3Q7RTP6 2002 aa11.5□□□□□ -0.57
TMEM260-206ENST00000555046 GPR179Q6PRD1 2367 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 ARHGEF37A1IGU5 675 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 EPOPA6NHQ4 379 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 NT5C1B-RDH14C9J2C7 533 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 TULP1O00294 542 aaPredicted RBP11.49□□□□□ -0.57
TMEM260-206ENST00000555046 PTGESO14684 152 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 PSMA7O14818 248 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 GRM6O15303 877 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 TGFB1I1O43294 461 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 EXOC3O60645 756 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 CXCL14O95715 111 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 MBD3O95983 291 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 PRR29P0C7W0 189 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 CXCL8P10145 99 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 PTMSP20962 102 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 PTPN5P54829 565 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 CREMQ03060 361 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 SMC1AQ14683 1233 aaKnown RBP11.49□□□□□ -0.57
TMEM260-206ENST00000555046 TMEM132DQ14C87 1099 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 ZBTB6Q15916 424 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 ENOX2Q16206 610 aaKnown RBP11.49□□□□□ -0.57
TMEM260-206ENST00000555046 MRPL43Q8N983 215 aaKnown RBP11.49□□□□□ -0.57
TMEM260-206ENST00000555046 TRIML1Q8N9V2 468 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 KIAA0895Q8NCT3 520 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 FNBP1Q96RU3 617 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 TSG101Q99816 390 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 TCF25Q9BQ70 676 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 CBWD1Q9BRT8 395 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 FGFBP2Q9BYJ0 223 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 HAPLN2Q9GZV7 340 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 PCIF1Q9H4Z3 704 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 ENTPD7Q9NQZ7 604 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 MRPL17Q9NRX2 175 aaKnown RBP11.49□□□□□ -0.57
TMEM260-206ENST00000555046 LMBRD1Q9NUN5 540 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 RBAKQ9NYW8 714 aaPredicted RBP11.49□□□□□ -0.57
TMEM260-206ENST00000555046 HSPBP1Q9NZL4 362 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 DNAJB4Q9UDY4 337 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 ADAM28Q9UKQ2 775 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 TRAF3IP3Q9Y228 551 aa11.49□□□□□ -0.57
TMEM260-206ENST00000555046 PRG3Q9Y2Y8 225 aaPredicted RBP11.49□□□□□ -0.57
TMEM260-206ENST00000555046 SF3B1O75533 1304 aaKnown RBP eCLIP11.49□□□□□ -0.571e-13■■■■■ 310.2
TMEM260-206ENST00000555046 CASTOR2A6NHX0 329 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 TMEM189-UBE2V1I3L0A0 370 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 RBAK-RBAKDNI3L0D1 243 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 FAM189A1O60320 539 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 GABBR2O75899 941 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 SOD2P04179 222 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 CTSAP10619 480 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 HOXD13P35453 343 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 TNFSF9P41273 254 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 AP3M2P53677 418 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 SNRNP35Q16560 246 aaKnown RBP11.48□□□□□ -0.57
TMEM260-206ENST00000555046 NFIL3Q16649 462 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 UPP1Q16831 310 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 EDRF1Q3B7T1 1238 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 USP41Q3LFD5 358 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 SEZ6Q53EL9 994 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 GLRA4Q5JXX5 417 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 SPATA1Q5VX52 437 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 ELMSAN1Q6PJG2 1045 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 PPFIBP1Q86W92 1011 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 BRSK2Q8IWQ3 736 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 GLIS3Q8NEA6 775 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 NOC3LQ8WTT2 800 aaKnown RBP11.48□□□□□ -0.57
TMEM260-206ENST00000555046 HLA-CQ95604 372 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 SAAL1Q96ER3 474 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 DHTKD1Q96HY7 919 aaPredicted RBP11.48□□□□□ -0.57
TMEM260-206ENST00000555046 EMILIN2Q9BXX0 1053 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 TLE6Q9H808 572 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.48□□□□□ -0.57
TMEM260-206ENST00000555046 KIAA1468Q9P260 1216 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 DPP7Q9UHL4 492 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 NUB1Q9Y5A7 615 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 IRAK3Q9Y616 596 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 SPTBN2O15020 2390 aa11.48□□□□□ -0.57
TMEM260-206ENST00000555046 MED19A0JLT2 244 aaPredicted RBP11.47□□□□□ -0.57
TMEM260-206ENST00000555046 BICDL2A1A5D9 508 aa11.47□□□□□ -0.57
TMEM260-206ENST00000555046 C19orf67A6NJJ6 358 aa11.47□□□□□ -0.57
TMEM260-206ENST00000555046 TISP43B9A030 160 aa11.47□□□□□ -0.57
TMEM260-206ENST00000555046 PODXLO00592 558 aa11.47□□□□□ -0.57
TMEM260-206ENST00000555046 FSCN2O14926 492 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms