RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 INO80B-WBP1J3KQ70 363 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 IL18RAPO95256 599 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 CALCAP01258 141 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 NOP14P78316 857 aaKnown RBP9.56□□□□□ -0.88
TDP1-210ENST00000554976 PTP4A2Q12974 167 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 NCOA4Q13772 614 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 CLEC16AQ2KHT3 1053 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 SLC10A6Q3KNW5 377 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 CCSAPQ6IQ19 270 aaPredicted RBP9.56□□□□□ -0.88
TDP1-210ENST00000554976 ALKAL1Q6UXT8 129 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 NT5DC3Q86UY8 548 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 VPS36Q86VN1 386 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 ZNF677Q86XU0 584 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 GPR161Q8N6U8 529 aaKnown RBP9.56□□□□□ -0.88
TDP1-210ENST00000554976 SLC35G2Q8TBE7 412 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 GOLGA1Q92805 767 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 FAXDC2Q96IV6 333 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 INO80BQ9C086 356 aaPredicted RBP9.56□□□□□ -0.88
TDP1-210ENST00000554976 CXCL16Q9H2A7 254 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.56□□□□□ -0.882e-9■■■■■ 223.6
TDP1-210ENST00000554976 TMEM59LQ9UK28 342 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 HYOU1Q9Y4L1 999 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 COL4A4P53420 1690 aaPredicted RBP9.56□□□□□ -0.88
TDP1-210ENST00000554976 BHMG1C9JSJ3 638 aaPredicted RBP9.56□□□□□ -0.88
TDP1-210ENST00000554976 TNPO2O14787 897 aaKnown RBP9.56□□□□□ -0.88
TDP1-210ENST00000554976 DDX3YO15523 660 aaKnown RBP9.56□□□□□ -0.88
TDP1-210ENST00000554976 ZEB2O60315 1214 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 ADAMTS4O75173 837 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 DUSP11O75319 330 aaKnown RBP9.56□□□□□ -0.88
TDP1-210ENST00000554976 CSDE1O75534 798 aaKnown RBP9.56□□□□□ -0.88
TDP1-210ENST00000554976 NFICP08651 508 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 STAG3L1P0CL83 205 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 CXCL8P10145 99 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 TNFAIP3P21580 790 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 CBX1P83916 185 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 BEX3Q00994 111 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 CYP4F22Q6NT55 531 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 CDR2LQ86X02 465 aaPredicted RBP9.56□□□□□ -0.88
TDP1-210ENST00000554976 TMEM40Q8WWA1 233 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 ZSWIM1Q9BR11 485 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 C1orf112Q9NSG2 853 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 PUF60Q9UHX1 559 aaKnown RBP9.56□□□□□ -0.88
TDP1-210ENST00000554976 TSKSQ9UJT2 592 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 AKT3Q9Y243 479 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 LACTBL1A8MY62 500 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 STAU1O95793 577 aaKnown RBP9.56□□□□□ -0.88
TDP1-210ENST00000554976 CFHP08603 1231 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 AKR1A1P14550 325 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 GRM5P41594 1212 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 MYL6P60660 151 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 PCBP1Q15365 356 aaKnown RBP eCLIP9.56□□□□□ -0.88
TDP1-210ENST00000554976 RASGEF1CQ8N431 466 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 C1orf127Q8N9H9 656 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 CD101Q93033 1021 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 PNKPQ96T60 521 aa9.56□□□□□ -0.88
TDP1-210ENST00000554976 SCN1AP35498 2009 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 ZRANB2O95218 330 aaKnown RBP eCLIP9.55□□□□□ -0.88
TDP1-210ENST00000554976 TBC1D8O95759 1140 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 FTCDO95954 541 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 TCP1P17987 556 aaKnown RBP9.55□□□□□ -0.88
TDP1-210ENST00000554976 TBXAS1P24557 533 aaPredicted RBP9.55□□□□□ -0.88
TDP1-210ENST00000554976 TMOD1P28289 359 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 CENPCQ03188 943 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 TRIM32Q13049 653 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 ZBTB6Q15916 424 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 DCAF12L1Q5VU92 463 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 JADE1Q6IE81 842 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 C11orf63Q6NUN7 778 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 MMGT1Q8N4V1 131 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 MNS1Q8NEH6 495 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 PPP1R13LQ8WUF5 828 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 CALR3Q96L12 384 aaKnown RBP9.55□□□□□ -0.88
TDP1-210ENST00000554976 TCRBV5S1A1TA0A578 114 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 TREHO43280 583 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 KIF4AO95239 1232 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 HARSP12081 509 aaKnown RBP9.55□□□□□ -0.88
TDP1-210ENST00000554976 DARSP14868 501 aaKnown RBP9.55□□□□□ -0.88
TDP1-210ENST00000554976 PDE6CP51160 858 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 FCGRTP55899 365 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 ZNF200P98182 395 aaPredicted RBP9.55□□□□□ -0.88
TDP1-210ENST00000554976 FSCN1Q16658 493 aaKnown RBP9.55□□□□□ -0.88
TDP1-210ENST00000554976 KYAT1Q16773 422 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 DUOXA2Q1HG44 320 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 XKR4Q5GH76 650 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 UBXN11Q5T124 520 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 ACAD10Q6JQN1 1059 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 MON1BQ7L1V2 547 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 KLHDC9Q8NEP7 349 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 PPP1R16BQ96T49 567 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 SDCBP2Q9H190 292 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 GOLPH3Q9H4A6 298 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 ASB7Q9H672 318 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 EHD2Q9NZN4 543 aa9.55□□□□□ -0.88
TDP1-210ENST00000554976 MROH7Q68CQ1 1323 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 BUB1BO60566 1050 aaPredicted RBP9.54□□□□□ -0.88
TDP1-210ENST00000554976 AOC2O75106 756 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 ALDH1A1P00352 501 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 FTLP02792 175 aaPredicted RBP9.54□□□□□ -0.88
TDP1-210ENST00000554976 CDH5P33151 784 aaPredicted RBP9.54□□□□□ -0.88
TDP1-210ENST00000554976 MATR3P43243 847 aaKnown RBP eCLIP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms