RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 RXFP1Q9HBX9 757 aa11.61□□□□□ -0.55
SHMT2-213ENST00000554600 DPP7Q9UHL4 492 aa11.61□□□□□ -0.55
SHMT2-213ENST00000554600 RCOR1Q9UKL0 485 aa11.61□□□□□ -0.55
SHMT2-213ENST00000554600 AGO2Q9UKV8 859 aaKnown RBP11.61□□□□□ -0.55
SHMT2-213ENST00000554600 A0A0B4J269 797 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 TTC26A0AVF1 554 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 C19orf67A6NJJ6 358 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 TMEM189-UBE2V1I3L0A0 370 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 MEFVO15553 781 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-213ENST00000554600 XPOTO43592 962 aaKnown RBP11.6□□□□□ -0.55
SHMT2-213ENST00000554600 PRPF6O94906 941 aaKnown RBP11.6□□□□□ -0.55
SHMT2-213ENST00000554600 EFEMP2O95967 443 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 IGFBP6P24592 240 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-213ENST00000554600 TKTP29401 623 aaKnown RBP11.6□□□□□ -0.55
SHMT2-213ENST00000554600 RPL9P32969 192 aaKnown RBP11.6□□□□□ -0.55
SHMT2-213ENST00000554600 MCM4P33991 863 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 AFMP43652 599 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 ACOT2P49753 483 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 CASP5P51878 434 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 ALCAMQ13740 583 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 POSTNQ15063 836 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 ENOX2Q16206 610 aaKnown RBP11.6□□□□□ -0.55
SHMT2-213ENST00000554600 L1TD1Q5T7N2 865 aaKnown RBP11.6□□□□□ -0.55
SHMT2-213ENST00000554600 PDXDC1Q6P996 788 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-213ENST00000554600 STXBP4Q6ZWJ1 553 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 CEP57L1Q8IYX8 460 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 C3orf58Q8NDZ4 430 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 LEO1Q8WVC0 666 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-213ENST00000554600 PIK3R5Q8WYR1 880 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 KHSRPQ92945 711 aaKnown RBP eCLIP11.6□□□□□ -0.55
SHMT2-213ENST00000554600 KCNN1Q92952 543 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 NECTIN4Q96NY8 510 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 TRIM9Q9C026 710 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 POMKQ9H5K3 350 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 EPHX3Q9H6B9 360 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 PLEKHA5Q9HAU0 1116 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 PIDD1Q9HB75 910 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 OLFML3Q9NRN5 406 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 FNIP2Q9P278 1114 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 TUBGCP4Q9UGJ1 667 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 UBQLN1Q9UMX0 589 aaKnown RBP11.6□□□□□ -0.55
SHMT2-213ENST00000554600 ZDHHC9Q9Y397 364 aa11.6□□□□□ -0.55
SHMT2-213ENST00000554600 TSC2P49815 1807 aa11.59□□□□□ -0.55
SHMT2-213ENST00000554600 FGFR3P22607 806 aa11.59□□□□□ -0.55
SHMT2-213ENST00000554600 GUCY2FP51841 1108 aa11.59□□□□□ -0.55
SHMT2-213ENST00000554600 KCNA1Q09470 495 aa11.59□□□□□ -0.55
SHMT2-213ENST00000554600 LIN9Q5TKA1 542 aa11.59□□□□□ -0.55
SHMT2-213ENST00000554600 JADE1Q6IE81 842 aa11.59□□□□□ -0.55
SHMT2-213ENST00000554600 RNF135Q8IUD6 432 aa11.59□□□□□ -0.55
SHMT2-213ENST00000554600 GPR65Q8IYL9 337 aa11.59□□□□□ -0.55
SHMT2-213ENST00000554600 TMEM130Q8N3G9 435 aa11.59□□□□□ -0.55
SHMT2-213ENST00000554600 KREMEN2Q8NCW0 462 aa11.59□□□□□ -0.55
SHMT2-213ENST00000554600 BEST2Q8NFU1 509 aa11.59□□□□□ -0.55
SHMT2-213ENST00000554600 LNX1Q8TBB1 728 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-213ENST00000554600 HPS3Q969F9 1004 aa11.59□□□□□ -0.55
SHMT2-213ENST00000554600 PYM1Q9BRP8 204 aaKnown RBP11.59□□□□□ -0.55
SHMT2-213ENST00000554600 C1QTNF1Q9BXJ1 281 aa11.59□□□□□ -0.55
SHMT2-213ENST00000554600 FGFBP2Q9BYJ0 223 aa11.59□□□□□ -0.55
SHMT2-213ENST00000554600 BLZF1Q9H2G9 400 aa11.59□□□□□ -0.55
SHMT2-213ENST00000554600 MAGEF1Q9HAY2 307 aa11.59□□□□□ -0.55
SHMT2-213ENST00000554600 KBTBD4Q9NVX7 518 aa11.59□□□□□ -0.55
SHMT2-213ENST00000554600 SERTAD1Q9UHV2 236 aa11.59□□□□□ -0.55
SHMT2-213ENST00000554600 KCNH3Q9ULD8 1083 aa11.59□□□□□ -0.55
SHMT2-213ENST00000554600 NR2E1Q9Y466 385 aa11.59□□□□□ -0.55
SHMT2-213ENST00000554600 TECTAO75443 2155 aa11.59□□□□□ -0.55
SHMT2-213ENST00000554600 ZNF638Q14966 1978 aaKnown RBP11.59□□□□□ -0.55
SHMT2-213ENST00000554600 CCDC195A0A1B0GUA6 201 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 A0A1B0GVL5 298 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 FRMD3A2A2Y4 597 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 TGM5O43548 720 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 DCXO43602 365 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 RFPL2O75678 378 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 PPP1R37O75864 691 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 ALADP13716 330 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 CASP1P29466 404 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 OR1D2P34982 312 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 ARPP19P56211 112 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 TMEM132DQ14C87 1099 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 FAM26FQ5R3K3 315 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 ANKS3Q6ZW76 656 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 GPR149Q86SP6 731 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 CD302Q8IX05 232 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 SMG7Q92540 1137 aaKnown RBP11.58□□□□□ -0.56
SHMT2-213ENST00000554600 SAAL1Q96ER3 474 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 CLSTN3Q9BQT9 956 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 PLEKHA4Q9H4M7 779 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 PCIF1Q9H4Z3 704 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 TMEM206Q9H813 350 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 MUTYHQ9UIF7 546 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 CPSF3Q9UKF6 684 aaKnown RBP11.58□□□□□ -0.56
SHMT2-213ENST00000554600 CDY1Q9Y6F8 540 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 MYH10P35580 1976 aa11.58□□□□□ -0.56
SHMT2-213ENST00000554600 NOTCH4Q99466 2003 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 GOLGA8IPA6NC78 632 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 FAM86C2PA6NEL3 165 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 GOLGA8JA6NMD2 632 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 LOC730098B7Z3J9 87 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 H7C4K7 107 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 SYN3O14994 580 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms