RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 ZBED4O75132 1171 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 SURF6O75683 361 aaKnown RBP5.78□□□□□ -1.48
ATXN3-228ENST00000554592 SCG5P05408 212 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 EEF2P13639 858 aaKnown RBP5.78□□□□□ -1.48
ATXN3-228ENST00000554592 AKR1B1P15121 316 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 VIPR1P32241 457 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 ECI1P42126 302 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 SUMO1P63165 101 aaKnown RBP5.78□□□□□ -1.48
ATXN3-228ENST00000554592 ATP8B2P98198 1209 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 BEX3Q00994 111 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 TAP1Q03518 808 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 FSCN1Q16658 493 aaKnown RBP5.78□□□□□ -1.48
ATXN3-228ENST00000554592 PRSS53Q2L4Q9 553 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 KRT40Q6A162 431 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 SNRNP48Q6IEG0 339 aaKnown RBP5.78□□□□□ -1.48
ATXN3-228ENST00000554592 ARMCX2Q7L311 632 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 ANKRD35Q8N283 1001 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 PRPF38AQ8NAV1 312 aaKnown RBP5.78□□□□□ -1.48
ATXN3-228ENST00000554592 TMEM145Q8NBT3 493 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 NUP43Q8NFH3 380 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 DYNLL2Q96FJ2 89 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 C1orf159Q96HA4 380 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 CCDC140Q96MF4 163 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 CLUHP3Q96NS8 147 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 UIMC1Q96RL1 719 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 SLF1Q9BQI6 1058 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 AP5M1Q9H0R1 490 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 CCDC8Q9H0W5 538 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-228ENST00000554592 WNT8AQ9H1J5 351 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 CNTD2Q9H8S5 307 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 NCOA5Q9HCD5 579 aaKnown RBP5.78□□□□□ -1.48
ATXN3-228ENST00000554592 FBXO40Q9UH90 709 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 DBNLQ9UJU6 430 aaKnown RBP5.78□□□□□ -1.48
ATXN3-228ENST00000554592 Q9Y3F1 56 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 RIPK3Q9Y572 518 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 CTDP1Q9Y5B0 961 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-228ENST00000554592 GRIN2DO15399 1336 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-228ENST00000554592 BLACEA4D250 179 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 EPOPA6NHQ4 379 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 ASB14A6NK59 587 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 IPO8O15397 1037 aaKnown RBP5.77□□□□□ -1.49
ATXN3-228ENST00000554592 ADCY6O43306 1168 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 B4GALT4O60513 344 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 PPP1R11O60927 126 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-228ENST00000554592 CYP2D6P10635 497 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 RFC2P35250 354 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 KCNJ6P48051 423 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 LINC00310P59036 64 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 SRSF3P84103 164 aaKnown RBP5.77□□□□□ -1.49
ATXN3-228ENST00000554592 NHLH1Q02575 133 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 SCRN1Q12765 414 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 MAP4K2Q12851 820 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 TTF1Q15361 905 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-228ENST00000554592 NTRK3Q16288 839 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 KRTAP19-4Q3LI73 84 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 LEXMQ3ZCV2 418 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 FAM83BQ5T0W9 1011 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 SLC35F1Q5T1Q4 408 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 SLC9C2Q5TAH2 1124 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 IQSEC1Q6DN90 963 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 DENND5AQ6IQ26 1287 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 LCNL1Q6ZST4 164 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 HERC6Q8IVU3 1022 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 AMOTL1Q8IY63 956 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 LRRC56Q8IYG6 542 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-228ENST00000554592 TRMT2AQ8IZ69 625 aaKnown RBP5.77□□□□□ -1.49
ATXN3-228ENST00000554592 CPXCR1Q8N123 301 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 NAT16Q8N8M0 369 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 KREMEN2Q8NCW0 462 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 CHST13Q8NET6 341 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 SSH3Q8TE77 659 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 KCTD13Q8WZ19 329 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 COPS5Q92905 334 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 EAF2Q96CJ1 260 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-228ENST00000554592 SCLYQ96I15 445 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 KATNBL1Q9H079 304 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 ALDH8A1Q9H2A2 487 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-228ENST00000554592 SLKQ9H2G2 1235 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-228ENST00000554592 ATP8A2Q9NTI2 1148 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 NOP58Q9Y2X3 529 aaKnown RBP5.77□□□□□ -1.49
ATXN3-228ENST00000554592 ADAMTS20P59510 1910 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 DNAH12Q6ZR08 3092 aa5.77□□□□□ -1.49
ATXN3-228ENST00000554592 NCOR1O75376 2440 aa5.76□□□□□ -1.49
ATXN3-228ENST00000554592 PIEZO1Q92508 2521 aa5.76□□□□□ -1.49
ATXN3-228ENST00000554592 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-228ENST00000554592 TCAF2A6NFQ2 919 aa5.76□□□□□ -1.49
ATXN3-228ENST00000554592 C2orf71A6NGG8 1288 aa5.76□□□□□ -1.49
ATXN3-228ENST00000554592 F5H6K3 240 aa5.76□□□□□ -1.49
ATXN3-228ENST00000554592 PLD2O14939 933 aa5.76□□□□□ -1.49
ATXN3-228ENST00000554592 LPXNO60711 386 aa5.76□□□□□ -1.49
ATXN3-228ENST00000554592 RFPL3O75679 317 aa5.76□□□□□ -1.49
ATXN3-228ENST00000554592 CPP00450 1065 aa5.76□□□□□ -1.49
ATXN3-228ENST00000554592 MPOP05164 745 aa5.76□□□□□ -1.49
ATXN3-228ENST00000554592 THBDP07204 575 aa5.76□□□□□ -1.49
ATXN3-228ENST00000554592 PDE6AP16499 860 aa5.76□□□□□ -1.49
ATXN3-228ENST00000554592 RARSP54136 660 aaKnown RBP5.76□□□□□ -1.49
ATXN3-228ENST00000554592 OAZ1P54368 228 aa5.76□□□□□ -1.49
ATXN3-228ENST00000554592 CORO7P57737 925 aa5.76□□□□□ -1.49
ATXN3-228ENST00000554592 KLRC3Q07444 240 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms