RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 KIAA0355O15063 1070 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 TIMP1P01033 207 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 NFICP08651 508 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 ACTN1P12814 892 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 P4HA1P13674 534 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 KCNE1P15382 129 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 ATF7P17544 494 aaPredicted RBP11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 ATICP31939 592 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 FXR1P51114 621 aaKnown RBP eCLIP11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 ADKP55263 362 aaKnown RBP11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 LRMPQ12912 555 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 MYO1EQ12965 1108 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 RAPGEF1Q13905 1077 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 IKBKEQ14164 716 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 MBTPS1Q14703 1052 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 GLB1LQ6UWU2 654 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 ALKAL1Q6UXT8 129 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 C15orf39Q6ZRI6 1047 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 RRAGAQ7L523 313 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 DEFB128Q7Z7B8 93 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 ECHDC2Q86YB7 292 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 LRRC8AQ8IWT6 810 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 HTATIP2Q9BUP3 242 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 NAA15Q9BXJ9 866 aaKnown RBP11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 TSPYL2Q9H2G4 693 aaPredicted RBP11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 RSAD1Q9HA92 442 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 UBE2TQ9NPD8 197 aaPredicted RBP11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 NLRC4Q9NPP4 1024 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 DNAJC12Q9UKB3 198 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 MYO6Q9UM54 1294 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 PCDHB7Q9Y5E2 793 aa11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 TRIP12Q14669 1992 aaPredicted RBP11.27□□□□□ -0.61
TMEM55B-205ENST00000554028 SMIM28A0A1B0GU29 152 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 C9IYK1 514 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 ENPP3O14638 875 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 HOXA2O43364 376 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 MGEA5O60502 916 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 EFCAB14O75071 495 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 CXCL10P02778 98 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 THP07101 528 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 PFKMP08237 780 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 CYP3A5P20815 502 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 TBXAS1P24557 533 aaPredicted RBP11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 STAT1P42224 750 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 WNT7BP56706 349 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 FAM189BP81408 668 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 XKR4Q5GH76 650 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 SFMBT2Q5VUG0 894 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 CNKSR3Q6P9H4 555 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 EFCAB13Q8IY85 973 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 ABI1Q8IZP0 508 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 PPM1KQ8N3J5 372 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 LMO3Q8TAP4 145 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 URGCPQ8TCY9 931 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 RSPH1Q8WYR4 309 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 FAXDC2Q96IV6 333 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 STK33Q9BYT3 514 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 OSBPL7Q9BZF2 842 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 WNT8AQ9H1J5 351 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 GANQ9H2C0 597 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 ELAC1Q9H777 363 aaKnown RBP11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 ABHD10Q9NUJ1 306 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 KANSL3Q9P2N6 904 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 AGAP1Q9UPQ3 857 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 PTPRJQ12913 1337 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 UMODL1Q5DID0 1318 aa11.26□□□□□ -0.61
TMEM55B-205ENST00000554028 ARL5CA6NH57 179 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 NOL4O94818 638 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 CST3P01034 146 aaPredicted RBP11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 ITGB3P05106 788 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 MLH1P40692 756 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 PNPLA4P41247 253 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 MYL6P60660 151 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 YWHAEP62258 255 aaKnown RBP11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 ZBTB6Q15916 424 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 ARHGAP44Q17R89 818 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 ZNF699Q32M78 642 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 ZNF667Q5HYK9 610 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 SMYD5Q6GMV2 418 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 IQCEQ6IPM2 695 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 MFSD5Q6N075 450 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 PDXDC1Q6P996 788 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 RTN4RL1Q86UN2 441 aaPredicted RBP11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 TMTC1Q8IUR5 882 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 C1orf127Q8N9H9 656 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 TC2NQ8N9U0 490 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 SYN2Q92777 582 aaPredicted RBP11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 SEMA4DQ92854 862 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 LPPQ93052 612 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 JAKMIP2Q96AA8 810 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 GAD1Q99259 594 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 BAG1Q99933 345 aaPredicted RBP11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 TTYH3Q9C0H2 523 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 DNAI2Q9GZS0 605 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 SIX2Q9NPC8 291 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 TMEM161AQ9NX61 479 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 FHOD1Q9Y613 1164 aa11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 BZW2Q9Y6E2 419 aaKnown RBP11.25□□□□□ -0.61
TMEM55B-205ENST00000554028 ABHD14A-ACY1A0A1B0GW23 586 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 LRRC53A6NM62 1247 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms