RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 LILRB3O75022 631 aa25.27■■□□□ 1.64
NEK9-203ENST00000553945 LDHAP00338 332 aaKnown RBP25.27■■□□□ 1.64
NEK9-203ENST00000553945 CNPP09543 421 aaKnown RBP25.27■■□□□ 1.64
NEK9-203ENST00000553945 SRGAP2BP0DMP2 458 aa25.27■■□□□ 1.64
NEK9-203ENST00000553945 DSG1Q02413 1049 aa25.27■■□□□ 1.64
NEK9-203ENST00000553945 ELAVL2Q12926 359 aaKnown RBP25.27■■□□□ 1.64
NEK9-203ENST00000553945 SNW1Q13573 536 aaKnown RBP25.27■■□□□ 1.64
NEK9-203ENST00000553945 ZBTB6Q15916 424 aa25.27■■□□□ 1.64
NEK9-203ENST00000553945 CEP57Q86XR8 500 aa25.27■■□□□ 1.64
NEK9-203ENST00000553945 RIN2Q8WYP3 895 aaPredicted RBP25.27■■□□□ 1.64
NEK9-203ENST00000553945 TSPAN18Q96SJ8 248 aa25.27■■□□□ 1.64
NEK9-203ENST00000553945 I3L4J1 428 aa25.26■■□□□ 1.63
NEK9-203ENST00000553945 TGFB1I1O43294 461 aa25.26■■□□□ 1.63
NEK9-203ENST00000553945 EXTL3O43909 919 aa25.26■■□□□ 1.63
NEK9-203ENST00000553945 GADD45BO75293 160 aaPredicted RBP25.26■■□□□ 1.63
NEK9-203ENST00000553945 KLRC2P26717 231 aa25.26■■□□□ 1.63
NEK9-203ENST00000553945 POU5F1Q01860 360 aaKnown RBP25.26■■□□□ 1.63
NEK9-203ENST00000553945 TMEM132DQ14C87 1099 aa25.26■■□□□ 1.63
NEK9-203ENST00000553945 BMT2Q1RMZ1 405 aa25.26■■□□□ 1.63
NEK9-203ENST00000553945 CD300LGQ6UXG3 332 aa25.26■■□□□ 1.63
NEK9-203ENST00000553945 HS2ST1Q7LGA3 356 aa25.26■■□□□ 1.63
NEK9-203ENST00000553945 TMEM130Q8N3G9 435 aa25.26■■□□□ 1.63
NEK9-203ENST00000553945 KIAA0895Q8NCT3 520 aa25.26■■□□□ 1.63
NEK9-203ENST00000553945 KLHL5Q96PQ7 755 aa25.26■■□□□ 1.63
NEK9-203ENST00000553945 ASB7Q9H672 318 aa25.26■■□□□ 1.63
NEK9-203ENST00000553945 CLEC1BQ9P126 229 aa25.26■■□□□ 1.63
NEK9-203ENST00000553945 DERAQ9Y315 318 aa25.26■■□□□ 1.63
NEK9-203ENST00000553945 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.26■■□□□ 1.63
NEK9-203ENST00000553945 HCFC2Q9Y5Z7 792 aa25.26■■□□□ 1.63
NEK9-203ENST00000553945 TRAPPC3O43617 180 aa25.25■■□□□ 1.63
NEK9-203ENST00000553945 IL18RAPO95256 599 aa25.25■■□□□ 1.63
NEK9-203ENST00000553945 NFICP08651 508 aa25.25■■□□□ 1.63
NEK9-203ENST00000553945 BRCC3P46736 316 aa25.25■■□□□ 1.63
NEK9-203ENST00000553945 GUCY2FP51841 1108 aa25.25■■□□□ 1.63
NEK9-203ENST00000553945 KCNC3Q14003 757 aa25.25■■□□□ 1.63
NEK9-203ENST00000553945 RTP2Q5QGT7 225 aa25.25■■□□□ 1.63
NEK9-203ENST00000553945 GPD1LQ8N335 351 aa25.25■■□□□ 1.63
NEK9-203ENST00000553945 BEST2Q8NFU1 509 aa25.25■■□□□ 1.63
NEK9-203ENST00000553945 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.25■■□□□ 1.63
NEK9-203ENST00000553945 TTPALQ9BTX7 342 aa25.25■■□□□ 1.63
NEK9-203ENST00000553945 AGPAT3Q9NRZ7 376 aa25.25■■□□□ 1.63
NEK9-203ENST00000553945 RBAKQ9NYW8 714 aaPredicted RBP25.25■■□□□ 1.63
NEK9-203ENST00000553945 NUB1Q9Y5A7 615 aa25.25■■□□□ 1.63
NEK9-203ENST00000553945 BRWD1Q9NSI6 2320 aa25.24■■□□□ 1.63
NEK9-203ENST00000553945 KIAA0391O15091 583 aaKnown RBP25.24■■□□□ 1.63
NEK9-203ENST00000553945 CLIC2O15247 247 aa25.24■■□□□ 1.63
NEK9-203ENST00000553945 CYP3A5P20815 502 aa25.24■■□□□ 1.63
NEK9-203ENST00000553945 PNOCQ13519 176 aa25.24■■□□□ 1.63
NEK9-203ENST00000553945 KNOP1Q1ED39 458 aaKnown RBP25.24■■□□□ 1.63
NEK9-203ENST00000553945 SPATA1Q5VX52 437 aa25.24■■□□□ 1.63
NEK9-203ENST00000553945 PTCRAQ6ISU1 281 aaPredicted RBP25.24■■□□□ 1.63
NEK9-203ENST00000553945 PRSS55Q6UWB4 352 aaPredicted RBP25.24■■□□□ 1.63
NEK9-203ENST00000553945 PPFIBP1Q86W92 1011 aa25.24■■□□□ 1.63
NEK9-203ENST00000553945 BRSK2Q8IWQ3 736 aa25.24■■□□□ 1.63
NEK9-203ENST00000553945 CASP10Q92851 521 aa25.24■■□□□ 1.63
NEK9-203ENST00000553945 RXFP1Q9HBX9 757 aa25.24■■□□□ 1.63
NEK9-203ENST00000553945 HSPBP1Q9NZL4 362 aa25.24■■□□□ 1.63
NEK9-203ENST00000553945 CD207Q9UJ71 328 aa25.24■■□□□ 1.63
NEK9-203ENST00000553945 TEX28O15482 410 aa25.23■■□□□ 1.63
NEK9-203ENST00000553945 RHOBTB3O94955 611 aa25.23■■□□□ 1.63
NEK9-203ENST00000553945 BMP1P13497 986 aa25.23■■□□□ 1.63
NEK9-203ENST00000553945 EPCAMP16422 314 aa25.23■■□□□ 1.63
NEK9-203ENST00000553945 LRPAP1P30533 357 aa25.23■■□□□ 1.63
NEK9-203ENST00000553945 CYP2J2P51589 502 aa25.23■■□□□ 1.63
NEK9-203ENST00000553945 SNRPFP62306 86 aaKnown RBP25.23■■□□□ 1.63
NEK9-203ENST00000553945 TMEM184AQ6ZMB5 413 aa25.23■■□□□ 1.63
NEK9-203ENST00000553945 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.23■■□□□ 1.63
NEK9-203ENST00000553945 SLC22A17Q8WUG5 538 aa25.23■■□□□ 1.63
NEK9-203ENST00000553945 MSLNLQ96KJ4 702 aa25.23■■□□□ 1.63
NEK9-203ENST00000553945 TIGD1Q96MW7 591 aa25.23■■□□□ 1.63
NEK9-203ENST00000553945 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.23■■□□□ 1.63
NEK9-203ENST00000553945 C2CD2Q9Y426 696 aa25.23■■□□□ 1.63
NEK9-203ENST00000553945 VCANP13611 3396 aa25.22■■□□□ 1.63
NEK9-203ENST00000553945 ADH1AP07327 375 aa25.22■■□□□ 1.63
NEK9-203ENST00000553945 FGFR3P22607 806 aa25.22■■□□□ 1.63
NEK9-203ENST00000553945 CREMQ03060 361 aa25.22■■□□□ 1.63
NEK9-203ENST00000553945 KCNB1Q14721 858 aa25.22■■□□□ 1.63
NEK9-203ENST00000553945 PUS10Q3MIT2 529 aaKnown RBP25.22■■□□□ 1.63
NEK9-203ENST00000553945 GPR65Q8IYL9 337 aa25.22■■□□□ 1.63
NEK9-203ENST00000553945 HOOK1Q9UJC3 728 aaKnown RBP25.22■■□□□ 1.63
NEK9-203ENST00000553945 ZNF233A6NK53 670 aa25.21■■□□□ 1.63
NEK9-203ENST00000553945 KINO60870 393 aaKnown RBP25.21■■□□□ 1.63
NEK9-203ENST00000553945 RPL17P18621 184 aaKnown RBP25.21■■□□□ 1.63
NEK9-203ENST00000553945 TKTP29401 623 aaKnown RBP25.21■■□□□ 1.63
NEK9-203ENST00000553945 MCM4P33991 863 aa25.21■■□□□ 1.63
NEK9-203ENST00000553945 WNT7BP56706 349 aa25.21■■□□□ 1.63
NEK9-203ENST00000553945 PSMD5Q16401 504 aa25.21■■□□□ 1.63
NEK9-203ENST00000553945 ANKRD54Q6NXT1 300 aa25.21■■□□□ 1.63
NEK9-203ENST00000553945 GLYCTKQ8IVS8 523 aa25.21■■□□□ 1.63
NEK9-203ENST00000553945 EFCAB13Q8IY85 973 aa25.21■■□□□ 1.63
NEK9-203ENST00000553945 PIK3R5Q8WYR1 880 aa25.21■■□□□ 1.63
NEK9-203ENST00000553945 IPO9Q96P70 1041 aaKnown RBP25.21■■□□□ 1.63
NEK9-203ENST00000553945 KIAA1586Q9HCI6 787 aa25.21■■□□□ 1.63
NEK9-203ENST00000553945 TSHZ2Q9NRE2 1034 aa25.21■■□□□ 1.63
NEK9-203ENST00000553945 FNIP2Q9P278 1114 aa25.21■■□□□ 1.63
NEK9-203ENST00000553945 CGNQ9P2M7 1197 aaKnown RBP25.21■■□□□ 1.63
NEK9-203ENST00000553945 TCF20Q9UGU0 1960 aaKnown RBP25.21■■□□□ 1.63
NEK9-203ENST00000553945 VWA8A3KMH1 1905 aa25.21■■□□□ 1.63
NEK9-203ENST00000553945 GRXCR2A6NFK2 248 aa25.2■■□□□ 1.62
NEK9-203ENST00000553945 CLCN4P51793 760 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms