RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 EMC7Q9NPA0 242 aa3.38□□□□□ -1.87
SRP54-204ENST00000553923 MTO1Q9Y2Z2 717 aaKnown RBP3.38□□□□□ -1.87
SRP54-204ENST00000553923 KAT6AQ92794 2004 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 CCDC151A5D8V7 595 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 GSG1L2A8MUP6 293 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 YY2O15391 372 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 LATS1O95835 1130 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 RAP2AP10114 183 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 FPR1P21462 350 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 ALDH1A3P47895 512 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 PPP3CAQ08209 521 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 SLFN5Q08AF3 891 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 SRSF7Q16629 238 aaKnown RBP eCLIP3.37□□□□□ -1.87
SRP54-204ENST00000553923 FSCN1Q16658 493 aaKnown RBP3.37□□□□□ -1.87
SRP54-204ENST00000553923 UGT8Q16880 541 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 KAZNQ674X7 775 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 ZNF529Q6P280 563 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 CNNM4Q6P4Q7 775 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 FOXR2Q6PJQ5 311 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 VGLL2Q8N8G2 317 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 SEMA6DQ8NFY4 1073 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 NUP133Q8WUM0 1156 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 SLC5A5Q92911 643 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 NINJ1Q92982 152 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 MED15Q96RN5 788 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 MOCS1Q9NZB8 636 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 VSX1Q9NZR4 365 aaPredicted RBP3.37□□□□□ -1.87
SRP54-204ENST00000553923 BTBD3Q9Y2F9 522 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 CD2APQ9Y5K6 639 aa3.37□□□□□ -1.87
SRP54-204ENST00000553923 ONECUT2O95948 504 aa3.36□□□□□ -1.87
SRP54-204ENST00000553923 IGKV2-30P06310 120 aa3.36□□□□□ -1.87
SRP54-204ENST00000553923 GATA3P23771 443 aa3.36□□□□□ -1.87
SRP54-204ENST00000553923 KLF9Q13886 244 aaPredicted RBP3.36□□□□□ -1.87
SRP54-204ENST00000553923 PTPRRQ15256 657 aa3.36□□□□□ -1.87
SRP54-204ENST00000553923 ADRM1Q16186 407 aa3.36□□□□□ -1.87
SRP54-204ENST00000553923 GPR162Q16538 588 aa3.36□□□□□ -1.87
SRP54-204ENST00000553923 C21orf62-AS1Q17RA5 79 aa3.36□□□□□ -1.87
SRP54-204ENST00000553923 MTX3Q5HYI7 312 aa3.36□□□□□ -1.87
SRP54-204ENST00000553923 LCE1EQ5T753 118 aa3.36□□□□□ -1.87
SRP54-204ENST00000553923 TSTD2Q5T7W7 516 aa3.36□□□□□ -1.87
SRP54-204ENST00000553923 ZNF626Q68DY1 528 aa3.36□□□□□ -1.87
SRP54-204ENST00000553923 PQLC1Q8N2U9 271 aa3.36□□□□□ -1.87
SRP54-204ENST00000553923 CASKIN2Q8WXE0 1202 aa3.36□□□□□ -1.87
SRP54-204ENST00000553923 FCRL4Q96PJ5 515 aa3.36□□□□□ -1.87
SRP54-204ENST00000553923 PNKPQ96T60 521 aa3.36□□□□□ -1.87
SRP54-204ENST00000553923 TARS2Q9BW92 718 aaKnown RBP3.36□□□□□ -1.87
SRP54-204ENST00000553923 DPP7Q9UHL4 492 aa3.36□□□□□ -1.87
SRP54-204ENST00000553923 NOC2LQ9Y3T9 749 aaKnown RBP3.36□□□□□ -1.87
SRP54-204ENST00000553923 TRGV11A0A075B6L2 103 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 A0A1W2PS29 197 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 WDR27A2RRH5 827 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 ADM5C9JUS6 153 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 RAB11FIP3O75154 756 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 PRR35P0CG20 571 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 ENPP1P22413 925 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 PCSK1P29120 753 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 ECHS1P30084 290 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 PTGER1P34995 402 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 SLC6A9P48067 706 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 IL2P60568 153 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 CDK17Q00537 523 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 EXOSC10Q01780 885 aaKnown RBP3.35□□□□□ -1.87
SRP54-204ENST00000553923 LLGL1Q15334 1064 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 NFE2L2Q16236 605 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.35□□□□□ -1.87
SRP54-204ENST00000553923 NBPF8Q3BBV2 869 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 ZNF782Q6ZMW2 699 aaPredicted RBP3.35□□□□□ -1.87
SRP54-204ENST00000553923 UBE3BQ7Z3V4 1068 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 AMIGO2Q86SJ2 522 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 TFAP2BQ92481 460 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 RAX2Q96IS3 184 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 GSTO2Q9H4Y5 243 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 LDAHQ9H6V9 325 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.35□□□□□ -1.87
SRP54-204ENST00000553923 TOPORSQ9NS56 1045 aaPredicted RBP3.35□□□□□ -1.87
SRP54-204ENST00000553923 ACTL7AQ9Y615 435 aa3.35□□□□□ -1.87
SRP54-204ENST00000553923 LINC01548A6NM66 108 aa3.34□□□□□ -1.87
SRP54-204ENST00000553923 MOSPD3O75425 235 aa3.34□□□□□ -1.87
SRP54-204ENST00000553923 NTN1O95631 604 aa3.34□□□□□ -1.87
SRP54-204ENST00000553923 FCER1AP12319 257 aa3.34□□□□□ -1.87
SRP54-204ENST00000553923 FOXG1P55316 489 aaPredicted RBP3.34□□□□□ -1.87
SRP54-204ENST00000553923 BMS1Q14692 1282 aaKnown RBP3.34□□□□□ -1.87
SRP54-204ENST00000553923 SART3Q15020 963 aaKnown RBP3.34□□□□□ -1.87
SRP54-204ENST00000553923 TCEA2Q15560 299 aa3.34□□□□□ -1.87
SRP54-204ENST00000553923 TKFCQ3LXA3 575 aa3.34□□□□□ -1.87
SRP54-204ENST00000553923 KLHL22Q53GT1 634 aa3.34□□□□□ -1.87
SRP54-204ENST00000553923 GJC2Q5T442 439 aaPredicted RBP3.34□□□□□ -1.87
SRP54-204ENST00000553923 TSHZ1Q6ZSZ6 1077 aa3.34□□□□□ -1.87
SRP54-204ENST00000553923 KCNK18Q7Z418 384 aa3.34□□□□□ -1.87
SRP54-204ENST00000553923 PPM1KQ8N3J5 372 aa3.34□□□□□ -1.87
SRP54-204ENST00000553923 FITM2Q8N6M3 262 aa3.34□□□□□ -1.87
SRP54-204ENST00000553923 OR2W6PQ8NHA6 318 aa3.34□□□□□ -1.87
SRP54-204ENST00000553923 LPIN2Q92539 896 aa3.34□□□□□ -1.87
SRP54-204ENST00000553923 GREM2Q9H772 168 aa3.34□□□□□ -1.87
SRP54-204ENST00000553923 LANCL2Q9NS86 450 aa3.34□□□□□ -1.87
SRP54-204ENST00000553923 AJAP1Q9UKB5 411 aaPredicted RBP3.34□□□□□ -1.87
SRP54-204ENST00000553923 WNT6Q9Y6F9 365 aa3.34□□□□□ -1.87
SRP54-204ENST00000553923 LINC00473A8K010 186 aa3.33□□□□□ -1.88
SRP54-204ENST00000553923 VWC2LB2RUY7 222 aa3.33□□□□□ -1.88
SRP54-204ENST00000553923 BPIP17213 487 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms