RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 MLXIPLQ9NP71 852 aa15.53■□□□□ 0.08
ACTN1-211ENST00000553882 SLC9A2Q9UBY0 812 aa15.53■□□□□ 0.08
ACTN1-211ENST00000553882 USTQ9Y2C2 406 aa15.53■□□□□ 0.08
ACTN1-211ENST00000553882 PCDHB2Q9Y5E7 798 aa15.53■□□□□ 0.08
ACTN1-211ENST00000553882 WDR81Q562E7 1941 aa15.53■□□□□ 0.08
ACTN1-211ENST00000553882 VIMP08670 466 aaKnown RBP15.53■□□□□ 0.08
ACTN1-211ENST00000553882 RALAP11233 206 aa15.53■□□□□ 0.08
ACTN1-211ENST00000553882 GARTP22102 1010 aa15.53■□□□□ 0.08
ACTN1-211ENST00000553882 SEZ6Q53EL9 994 aa15.53■□□□□ 0.08
ACTN1-211ENST00000553882 TMEM270Q6UE05 265 aa15.53■□□□□ 0.08
ACTN1-211ENST00000553882 ARMC9Q7Z3E5 817 aa15.53■□□□□ 0.08
ACTN1-211ENST00000553882 PRUNE1Q86TP1 453 aa15.53■□□□□ 0.08
ACTN1-211ENST00000553882 RUNDC3BQ96NL0 473 aa15.53■□□□□ 0.08
ACTN1-211ENST00000553882 KLHL11Q9NVR0 708 aa15.53■□□□□ 0.08
ACTN1-211ENST00000553882 ARHGAP28Q9P2N2 729 aa15.53■□□□□ 0.08
ACTN1-211ENST00000553882 HARSP12081 509 aaKnown RBP15.52■□□□□ 0.08
ACTN1-211ENST00000553882 DSG3P32926 999 aa15.52■□□□□ 0.08
ACTN1-211ENST00000553882 NF2P35240 595 aa15.52■□□□□ 0.08
ACTN1-211ENST00000553882 ITGA8P53708 1063 aa15.52■□□□□ 0.08
ACTN1-211ENST00000553882 POLGP54098 1239 aaPredicted RBP15.52■□□□□ 0.08
ACTN1-211ENST00000553882 TNFAIP1Q13829 316 aa15.52■□□□□ 0.08
ACTN1-211ENST00000553882 KYNUQ16719 465 aa15.52■□□□□ 0.08
ACTN1-211ENST00000553882 SCARA3Q6AZY7 606 aa15.52■□□□□ 0.08
ACTN1-211ENST00000553882 NSUN6Q8TEA1 469 aaKnown RBP15.52■□□□□ 0.08
ACTN1-211ENST00000553882 CENPTQ96BT3 561 aa15.52■□□□□ 0.08
ACTN1-211ENST00000553882 LRRIQ4A6NIV6 560 aa15.52■□□□□ 0.07
ACTN1-211ENST00000553882 ADCY8P40145 1251 aa15.52■□□□□ 0.07
ACTN1-211ENST00000553882 GTF2A1P52655 376 aaPredicted RBP15.52■□□□□ 0.07
ACTN1-211ENST00000553882 MCCD1P59942 119 aaPredicted RBP15.52■□□□□ 0.07
ACTN1-211ENST00000553882 ZACNQ401N2 412 aa15.52■□□□□ 0.07
ACTN1-211ENST00000553882 C15orf39Q6ZRI6 1047 aa15.52■□□□□ 0.07
ACTN1-211ENST00000553882 ENOSF1Q7L5Y1 443 aa15.52■□□□□ 0.07
ACTN1-211ENST00000553882 EXOC3L1Q86VI1 746 aa15.52■□□□□ 0.07
ACTN1-211ENST00000553882 TAX1BP1Q86VP1 789 aa15.52■□□□□ 0.07
ACTN1-211ENST00000553882 RDM1Q8NG50 284 aa15.52■□□□□ 0.07
ACTN1-211ENST00000553882 JDP2Q8WYK2 163 aa15.52■□□□□ 0.07
ACTN1-211ENST00000553882 DDX27Q96GQ7 796 aaKnown RBP15.52■□□□□ 0.07
ACTN1-211ENST00000553882 HAPLN2Q9GZV7 340 aa15.52■□□□□ 0.07
ACTN1-211ENST00000553882 PDLIM7Q9NR12 457 aa15.52■□□□□ 0.07
ACTN1-211ENST00000553882 AGO2Q9UKV8 859 aaKnown RBP15.52■□□□□ 0.07
ACTN1-211ENST00000553882 EXTL3O43909 919 aa15.51■□□□□ 0.07
ACTN1-211ENST00000553882 CD58P19256 250 aa15.51■□□□□ 0.07
ACTN1-211ENST00000553882 BACE1P56817 501 aa15.51■□□□□ 0.07
ACTN1-211ENST00000553882 EMC2Q15006 297 aa15.51■□□□□ 0.07
ACTN1-211ENST00000553882 SNF8Q96H20 258 aa15.51■□□□□ 0.07
ACTN1-211ENST00000553882 ELAC2Q9BQ52 826 aaKnown RBP15.51■□□□□ 0.07
ACTN1-211ENST00000553882 DCLK3Q9C098 648 aa15.51■□□□□ 0.07
ACTN1-211ENST00000553882 APOBEC3GQ9HC16 384 aaKnown RBP15.51■□□□□ 0.07
ACTN1-211ENST00000553882 WHRNQ9P202 907 aa15.51■□□□□ 0.07
ACTN1-211ENST00000553882 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.51■□□□□ 0.07
ACTN1-211ENST00000553882 UMODL1Q5DID0 1318 aa15.51■□□□□ 0.07
ACTN1-211ENST00000553882 IVDP26440 423 aa15.51■□□□□ 0.07
ACTN1-211ENST00000553882 TAS2R40P59535 323 aa15.51■□□□□ 0.07
ACTN1-211ENST00000553882 SP2Q02086 613 aa15.51■□□□□ 0.07
ACTN1-211ENST00000553882 ADCY1Q08828 1119 aa15.51■□□□□ 0.07
ACTN1-211ENST00000553882 STRN3Q13033 797 aa15.51■□□□□ 0.07
ACTN1-211ENST00000553882 ZNF772Q68DY9 489 aaPredicted RBP15.51■□□□□ 0.07
ACTN1-211ENST00000553882 SUGP1Q8IWZ8 645 aaKnown RBP15.51■□□□□ 0.07
ACTN1-211ENST00000553882 CCDC197Q8NCU1 140 aa15.51■□□□□ 0.07
ACTN1-211ENST00000553882 IPO4Q8TEX9 1081 aaKnown RBP15.51■□□□□ 0.07
ACTN1-211ENST00000553882 SENP7Q9BQF6 1050 aa15.51■□□□□ 0.07
ACTN1-211ENST00000553882 SLC40A1Q9NP59 571 aa15.51■□□□□ 0.07
ACTN1-211ENST00000553882 TBK1Q9UHD2 729 aa15.51■□□□□ 0.07
ACTN1-211ENST00000553882 ZNF214Q9UL59 606 aaPredicted RBP15.51■□□□□ 0.07
ACTN1-211ENST00000553882 PCDHB4Q9Y5E5 795 aa15.51■□□□□ 0.07
ACTN1-211ENST00000553882 CD2APQ9Y5K6 639 aa15.51■□□□□ 0.07
ACTN1-211ENST00000553882 VNN1O95497 513 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 GAS8O95995 478 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 C4BPAP04003 597 aaKnown RBP15.5■□□□□ 0.07
ACTN1-211ENST00000553882 ATF2P15336 505 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 GNA15P30679 374 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 SCTRP47872 440 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 CENPCQ03188 943 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 TMEM132BQ14DG7 1078 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 ZFYVE27Q5T4F4 411 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 TRMT10CQ7L0Y3 403 aaKnown RBP15.5■□□□□ 0.07
ACTN1-211ENST00000553882 MON1BQ7L1V2 547 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 ANKS1BQ7Z6G8 1248 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 DYDC1Q8WWB3 177 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 CCT6BQ92526 530 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 ARHGEF2Q92974 986 aaKnown RBP15.5■□□□□ 0.07
ACTN1-211ENST00000553882 WRNIP1Q96S55 665 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 A1CFQ9NQ94 594 aaKnown RBP15.5■□□□□ 0.07
ACTN1-211ENST00000553882 HAUS2Q9NVX0 235 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 RBAKQ9NYW8 714 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-211ENST00000553882 ADAM22Q9P0K1 906 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 HACL1Q9UJ83 578 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 ZNF541Q9H0D2 1346 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 THAP12O43422 761 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 ZC3H11AO75152 810 aaKnown RBP eCLIP15.5■□□□□ 0.07
ACTN1-211ENST00000553882 ITIH2P19823 946 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 FSTL1Q12841 308 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 CNGA2Q16280 664 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 RHBDF2Q6PJF5 856 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 ABHD15Q6UXT9 468 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 TAOK1Q7L7X3 1001 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 ANKRD42Q8N9B4 389 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 SLCO2A1Q92959 643 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 SCLT1Q96NL6 688 aa15.5■□□□□ 0.07
ACTN1-211ENST00000553882 TMEM109Q9BVC6 243 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms