RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 SH2B1Q9NRF2 756 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-210ENST00000553779 NCDNQ9UBB6 729 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 TNFSF13BQ9Y275 285 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 MRPS17Q9Y2R5 130 aaKnown RBP10.85□□□□□ -0.67
ACTN1-210ENST00000553779 SDK1Q7Z5N4 2213 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 COL4A3Q01955 1670 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 SMIM28A0A1B0GU29 152 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 FAM170BA6NMN3 283 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 NCAM2O15394 837 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 EDN1P05305 212 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 RHOP08100 348 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 PTPN2P17706 415 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 MARCKSP29966 332 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-210ENST00000553779 GRM5P41594 1212 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 MAGEA9P43362 315 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 NPTX2P47972 431 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 SMTNP53814 917 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 ROR1Q01973 937 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 PTGDRQ13258 359 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 UPP1Q16831 310 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 CTXN3Q4LDR2 81 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 SLC44A4Q53GD3 710 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 VARS2Q5ST30 1063 aaKnown RBP10.84□□□□□ -0.67
ACTN1-210ENST00000553779 CYP4A22Q5TCH4 519 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 NT5DC1Q5TFE4 455 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 ZNF280DQ6N043 979 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 DTHD1Q6ZMT9 781 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 PDZD4Q76G19 769 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-210ENST00000553779 RTL10Q7L3V2 364 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 ERMP1Q7Z2K6 904 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 FBXO18Q8NFZ0 1043 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 ATRIPQ8WXE1 791 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 RPP25Q9BUL9 199 aaKnown RBP10.84□□□□□ -0.67
ACTN1-210ENST00000553779 BRD9Q9H8M2 597 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 GDE1Q9NZC3 331 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 BACE2Q9Y5Z0 518 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 DCHS1Q96JQ0 3298 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 CACNA1BQ00975 2339 aa10.84□□□□□ -0.67
ACTN1-210ENST00000553779 NCOR2Q9Y618 2525 aa10.83□□□□□ -0.68
ACTN1-210ENST00000553779 E9PMD0 336 aa10.83□□□□□ -0.68
ACTN1-210ENST00000553779 LAD1O00515 517 aa10.83□□□□□ -0.68
ACTN1-210ENST00000553779 ZNF197O14709 1029 aa10.83□□□□□ -0.68
ACTN1-210ENST00000553779 SLC16A4O15374 487 aa10.83□□□□□ -0.68
ACTN1-210ENST00000553779 LRRN2O75325 713 aa10.83□□□□□ -0.68
ACTN1-210ENST00000553779 PAPLNO95428 1278 aa10.83□□□□□ -0.68
ACTN1-210ENST00000553779 POU2F2P09086 479 aa10.83□□□□□ -0.68
ACTN1-210ENST00000553779 MCF2P10911 925 aa10.83□□□□□ -0.68
ACTN1-210ENST00000553779 CEBPBP17676 345 aa10.83□□□□□ -0.68
ACTN1-210ENST00000553779 STARD6P59095 220 aa10.83□□□□□ -0.68
ACTN1-210ENST00000553779 CSTF1Q05048 431 aaKnown RBP10.83□□□□□ -0.68
ACTN1-210ENST00000553779 RAD51AP2Q09MP3 1159 aa10.83□□□□□ -0.68
ACTN1-210ENST00000553779 NOLC1Q14978 699 aaKnown RBP eCLIP10.83□□□□□ -0.68
ACTN1-210ENST00000553779 NAB2Q15742 525 aa10.83□□□□□ -0.68
ACTN1-210ENST00000553779 ZBTB41Q5SVQ8 909 aa10.83□□□□□ -0.68
ACTN1-210ENST00000553779 MPZL3Q6UWV2 235 aa10.83□□□□□ -0.68
ACTN1-210ENST00000553779 ZNF852Q6ZMS4 543 aa10.83□□□□□ -0.68
ACTN1-210ENST00000553779 CEP120Q8N960 986 aa10.83□□□□□ -0.68
ACTN1-210ENST00000553779 APPL2Q8NEU8 664 aa10.83□□□□□ -0.68
ACTN1-210ENST00000553779 RASSF8Q8NHQ8 419 aa10.83□□□□□ -0.68
ACTN1-210ENST00000553779 RUBCNQ92622 972 aa10.83□□□□□ -0.68
ACTN1-210ENST00000553779 ACO2Q99798 780 aaKnown RBP10.83□□□□□ -0.68
ACTN1-210ENST00000553779 TARS2Q9BW92 718 aaKnown RBP10.83□□□□□ -0.68
ACTN1-210ENST00000553779 DNMT3BQ9UBC3 853 aaKnown RBP10.83□□□□□ -0.68
ACTN1-210ENST00000553779 RBM19Q9Y4C8 960 aaKnown RBP10.83□□□□□ -0.68
ACTN1-210ENST00000553779 SCN1AP35498 2009 aa10.83□□□□□ -0.68
ACTN1-210ENST00000553779 DENND4CQ5VZ89 1909 aa10.83□□□□□ -0.68
ACTN1-210ENST00000553779 TSC2P49815 1807 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 H3BQV1 296 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 TULP1O00294 542 aaPredicted RBP10.82□□□□□ -0.68
ACTN1-210ENST00000553779 SYN3O14994 580 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 SPTLC1O15269 473 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 ECI2O75521 394 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 MYL4P12829 197 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 CD72P21854 359 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 RPL9P32969 192 aaKnown RBP10.82□□□□□ -0.68
ACTN1-210ENST00000553779 SOX4Q06945 474 aaPredicted RBP10.82□□□□□ -0.68
ACTN1-210ENST00000553779 ST3GAL1Q11201 340 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 GRM2Q14416 872 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 PDIA5Q14554 519 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 PPP2R5DQ14738 602 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 ECM1Q16610 540 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 RSPO2Q6UXX9 243 aaPredicted RBP10.82□□□□□ -0.68
ACTN1-210ENST00000553779 DGLUCYQ7Z3D6 616 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 USP37Q86T82 979 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 YAF2Q8IY57 180 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 C3orf58Q8NDZ4 430 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 ZNF461Q8TAF7 563 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 ZNF512Q96ME7 567 aaPredicted RBP10.82□□□□□ -0.68
ACTN1-210ENST00000553779 RUSC1Q9BVN2 902 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 TIPINQ9BVW5 301 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 TMEM134Q9H6X4 195 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 ZFP14Q9HCL3 533 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 LTB4R2Q9NPC1 389 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 ASAH2Q9NR71 780 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 KCNG1Q9UIX4 513 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 RAB23Q9ULC3 237 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 NDRG2Q9UN36 371 aaKnown RBP10.82□□□□□ -0.68
ACTN1-210ENST00000553779 INSL5Q9Y5Q6 135 aa10.82□□□□□ -0.68
ACTN1-210ENST00000553779 CNOT1A5YKK6 2376 aaKnown RBP10.81□□□□□ -0.68
ACTN1-210ENST00000553779 WDR27A2RRH5 827 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms