RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 NOP9Q86U38 636 aaKnown RBP16.45■□□□□ 0.22
ABCD4-218ENST00000553486 NT5DC3Q86UY8 548 aa16.45■□□□□ 0.22
ABCD4-218ENST00000553486 PALB2Q86YC2 1186 aa16.45■□□□□ 0.22
ABCD4-218ENST00000553486 ACTRT1Q8TDG2 376 aa16.45■□□□□ 0.22
ABCD4-218ENST00000553486 TATDN2Q93075 761 aa16.45■□□□□ 0.22
ABCD4-218ENST00000553486 MRPL4Q9BYD3 311 aaKnown RBP16.45■□□□□ 0.22
ABCD4-218ENST00000553486 HAPLN2Q9GZV7 340 aa16.45■□□□□ 0.22
ABCD4-218ENST00000553486 THAP2Q9H0W7 228 aa16.45■□□□□ 0.22
ABCD4-218ENST00000553486 RBM12Q9NTZ6 932 aaKnown RBP16.45■□□□□ 0.22
ABCD4-218ENST00000553486 ANKFY1Q9P2R3 1169 aa16.45■□□□□ 0.22
ABCD4-218ENST00000553486 UNC80Q8N2C7 3258 aa16.45■□□□□ 0.22
ABCD4-218ENST00000553486 KBTBD13C9JR72 458 aa16.45■□□□□ 0.22
ABCD4-218ENST00000553486 CLDN3O15551 220 aa16.45■□□□□ 0.22
ABCD4-218ENST00000553486 CYP11B1P15538 503 aa16.45■□□□□ 0.22
ABCD4-218ENST00000553486 CHRNB2P17787 502 aa16.45■□□□□ 0.22
ABCD4-218ENST00000553486 LAMTOR4Q0VGL1 99 aa16.45■□□□□ 0.22
ABCD4-218ENST00000553486 CDCA2Q69YH5 1023 aaPredicted RBP16.45■□□□□ 0.22
ABCD4-218ENST00000553486 ARMCX2Q7L311 632 aa16.45■□□□□ 0.22
ABCD4-218ENST00000553486 SLC47A2Q86VL8 602 aa16.45■□□□□ 0.22
ABCD4-218ENST00000553486 USP38Q8NB14 1042 aa16.45■□□□□ 0.22
ABCD4-218ENST00000553486 ARHGEF26Q96DR7 871 aa16.45■□□□□ 0.22
ABCD4-218ENST00000553486 CGRRF1Q99675 332 aa16.45■□□□□ 0.22
ABCD4-218ENST00000553486 ACBD3Q9H3P7 528 aa16.45■□□□□ 0.22
ABCD4-218ENST00000553486 GOLPH3Q9H4A6 298 aa16.45■□□□□ 0.22
ABCD4-218ENST00000553486 PDE11AQ9HCR9 933 aa16.45■□□□□ 0.22
ABCD4-218ENST00000553486 OSGEPQ9NPF4 335 aa16.45■□□□□ 0.22
ABCD4-218ENST00000553486 CEP104O60308 925 aa16.44■□□□□ 0.22
ABCD4-218ENST00000553486 BUB1BO60566 1050 aaPredicted RBP16.44■□□□□ 0.22
ABCD4-218ENST00000553486 HLA-DRAP01903 254 aa16.44■□□□□ 0.22
ABCD4-218ENST00000553486 PIK3CAP42336 1068 aa16.44■□□□□ 0.22
ABCD4-218ENST00000553486 TNNC1P63316 161 aa16.44■□□□□ 0.22
ABCD4-218ENST00000553486 CDR2Q01850 454 aa16.44■□□□□ 0.22
ABCD4-218ENST00000553486 DRP2Q13474 957 aa16.44■□□□□ 0.22
ABCD4-218ENST00000553486 BIRC3Q13489 604 aa16.44■□□□□ 0.22
ABCD4-218ENST00000553486 LAMC2Q13753 1193 aa16.44■□□□□ 0.22
ABCD4-218ENST00000553486 TFDP1Q14186 410 aa16.44■□□□□ 0.22
ABCD4-218ENST00000553486 SMC1AQ14683 1233 aaKnown RBP16.44■□□□□ 0.22
ABCD4-218ENST00000553486 CASP8Q14790 479 aa16.44■□□□□ 0.22
ABCD4-218ENST00000553486 ZNF792Q3KQV3 632 aa16.44■□□□□ 0.22
ABCD4-218ENST00000553486 TAF3Q5VWG9 929 aa16.44■□□□□ 0.22
ABCD4-218ENST00000553486 TRIM50Q86XT4 487 aa16.44■□□□□ 0.22
ABCD4-218ENST00000553486 UBE2Q2Q8WVN8 375 aa16.44■□□□□ 0.22
ABCD4-218ENST00000553486 COPS5Q92905 334 aa16.44■□□□□ 0.22
ABCD4-218ENST00000553486 HES6Q96HZ4 224 aa16.44■□□□□ 0.22
ABCD4-218ENST00000553486 TRPC6Q9Y210 931 aa16.44■□□□□ 0.22
ABCD4-218ENST00000553486 ZBTB42B2RXF5 422 aa16.43■□□□□ 0.22
ABCD4-218ENST00000553486 TOM1L1O75674 476 aa16.43■□□□□ 0.22
ABCD4-218ENST00000553486 SRGAP2CP0DJJ0 459 aa16.43■□□□□ 0.22
ABCD4-218ENST00000553486 AP3M2P53677 418 aa16.43■□□□□ 0.22
ABCD4-218ENST00000553486 BPIFB4P59827 614 aa16.43■□□□□ 0.22
ABCD4-218ENST00000553486 FMO1Q01740 532 aa16.43■□□□□ 0.22
ABCD4-218ENST00000553486 GABPB1Q06547 395 aaPredicted RBP16.43■□□□□ 0.22
ABCD4-218ENST00000553486 MAPK6Q16659 721 aa16.43■□□□□ 0.22
ABCD4-218ENST00000553486 TDRD10Q5VZ19 366 aaKnown RBP16.43■□□□□ 0.22
ABCD4-218ENST00000553486 DEFB123Q8N688 67 aa16.43■□□□□ 0.22
ABCD4-218ENST00000553486 METTL13Q8N6R0 699 aa16.43■□□□□ 0.22
ABCD4-218ENST00000553486 RNF149Q8NC42 400 aa16.43■□□□□ 0.22
ABCD4-218ENST00000553486 PCDHB18PQ96TA0 734 aa16.43■□□□□ 0.22
ABCD4-218ENST00000553486 LBHD1Q9BQE6 289 aaPredicted RBP16.43■□□□□ 0.22
ABCD4-218ENST00000553486 PI4K2AQ9BTU6 479 aa16.43■□□□□ 0.22
ABCD4-218ENST00000553486 UBXN6Q9BZV1 441 aa16.43■□□□□ 0.22
ABCD4-218ENST00000553486 CCDC113Q9H0I3 377 aa16.43■□□□□ 0.22
ABCD4-218ENST00000553486 VTA1Q9NP79 307 aa16.43■□□□□ 0.22
ABCD4-218ENST00000553486 PDGFCQ9NRA1 345 aa16.43■□□□□ 0.22
ABCD4-218ENST00000553486 STIM2Q9P246 746 aa16.43■□□□□ 0.22
ABCD4-218ENST00000553486 CTTNBP2NLQ9P2B4 639 aa16.43■□□□□ 0.22
ABCD4-218ENST00000553486 EYSQ5T1H1 3165 aa16.43■□□□□ 0.22
ABCD4-218ENST00000553486 A0A0U1RQG5 324 aaPredicted RBP16.42■□□□□ 0.22
ABCD4-218ENST00000553486 ASAP2O43150 1006 aa16.42■□□□□ 0.22
ABCD4-218ENST00000553486 EDN1P05305 212 aa16.42■□□□□ 0.22
ABCD4-218ENST00000553486 PRKCBP05771 671 aa16.42■□□□□ 0.22
ABCD4-218ENST00000553486 MMEP08473 750 aa16.42■□□□□ 0.22
ABCD4-218ENST00000553486 KRT5P13647 590 aa16.42■□□□□ 0.22
ABCD4-218ENST00000553486 MKRN4PQ13434 485 aaPredicted RBP16.42■□□□□ 0.22
ABCD4-218ENST00000553486 LMBRD2Q68DH5 695 aaPredicted RBP16.42■□□□□ 0.22
ABCD4-218ENST00000553486 DHX38Q92620 1227 aaKnown RBP16.42■□□□□ 0.22
ABCD4-218ENST00000553486 ACO2Q99798 780 aaKnown RBP16.42■□□□□ 0.22
ABCD4-218ENST00000553486 TCHPQ9BT92 498 aa16.42■□□□□ 0.22
ABCD4-218ENST00000553486 ERAP1Q9NZ08 941 aa16.42■□□□□ 0.22
ABCD4-218ENST00000553486 DMGDHQ9UI17 866 aaKnown RBP16.42■□□□□ 0.22
ABCD4-218ENST00000553486 EVPLQ92817 2033 aa16.42■□□□□ 0.22
ABCD4-218ENST00000553486 PGRMC1O00264 195 aaKnown RBP16.42■□□□□ 0.22
ABCD4-218ENST00000553486 ZMYND10O75800 440 aa16.42■□□□□ 0.22
ABCD4-218ENST00000553486 GH1P01241 217 aa16.42■□□□□ 0.22
ABCD4-218ENST00000553486 MYCNP04198 464 aaPredicted RBP16.42■□□□□ 0.22
ABCD4-218ENST00000553486 SURF1Q15526 300 aa16.42■□□□□ 0.22
ABCD4-218ENST00000553486 ZNF484Q5JVG2 852 aa16.42■□□□□ 0.22
ABCD4-218ENST00000553486 SLC39A5Q6ZMH5 540 aa16.42■□□□□ 0.22
ABCD4-218ENST00000553486 ZNF467Q7Z7K2 595 aaPredicted RBP16.42■□□□□ 0.22
ABCD4-218ENST00000553486 ZNF677Q86XU0 584 aa16.42■□□□□ 0.22
ABCD4-218ENST00000553486 BRSK2Q8IWQ3 736 aa16.42■□□□□ 0.22
ABCD4-218ENST00000553486 RASGEF1CQ8N431 466 aa16.42■□□□□ 0.22
ABCD4-218ENST00000553486 LRRC71Q8N4P6 559 aa16.42■□□□□ 0.22
ABCD4-218ENST00000553486 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.42■□□□□ 0.222e-7■□□□□ 11.2
ABCD4-218ENST00000553486 TINF2Q9BSI4 451 aa16.42■□□□□ 0.22
ABCD4-218ENST00000553486 VIPAS39Q9H9C1 493 aa16.42■□□□□ 0.22
ABCD4-218ENST00000553486 PRKAG2Q9UGJ0 569 aa16.42■□□□□ 0.22
ABCD4-218ENST00000553486 TMEM59LQ9UK28 342 aa16.42■□□□□ 0.22
ABCD4-218ENST00000553486 ATP11BQ9Y2G3 1177 aa16.42■□□□□ 0.22
ABCD4-218ENST00000553486 CNTNAP2Q9UHC6 1331 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms