RNA–Protein interactions for RNA: ENST00000553055.1

PFKM-231, Transcript of phosphofructokinase, muscle, humanhuman

TSL 5

Gene PFKM, Length 289 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-231ENST00000553055 CPA4Q9UI42 421 aa8.17□□□□□ -1.1
PFKM-231ENST00000553055 NSFL1CQ9UNZ2 370 aaKnown RBP8.17□□□□□ -1.1
PFKM-231ENST00000553055 DHX29Q7Z478 1369 aaKnown RBP8.17□□□□□ -1.1
PFKM-231ENST00000553055 SSU72P8A0A1W2PR75 194 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 CLCA1A8K7I4 914 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 PPFIA3O75145 1194 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 FAM155BO75949 473 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 SGPL1O95470 568 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 HSPA4LO95757 839 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 ALBP02768 609 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 TYRP14679 529 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 NPR1P16066 1061 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 CST5P28325 142 aaPredicted RBP8.16□□□□□ -1.1
PFKM-231ENST00000553055 ACTN2P35609 894 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 PCBP3P57721 371 aaKnown RBP8.16□□□□□ -1.1
PFKM-231ENST00000553055 HTRA4P83105 476 aaPredicted RBP8.16□□□□□ -1.1
PFKM-231ENST00000553055 SLC12A1Q13621 1099 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 TRIM25Q14258 630 aaKnown RBP8.16□□□□□ -1.1
PFKM-231ENST00000553055 RTP2Q5QGT7 225 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 LRCH2Q5VUJ6 765 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 KIAA1841Q6NSI8 718 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 BORAQ6PGQ7 559 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 FAM180AQ6UWF9 173 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 ZNF765Q7L2R6 523 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 HERC6Q8IVU3 1022 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 CEP57L1Q8IYX8 460 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 Q8N1Y9 231 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 ARL6IP6Q8N6S5 226 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 UHMK1Q8TAS1 419 aaKnown RBP8.16□□□□□ -1.1
PFKM-231ENST00000553055 IPO4Q8TEX9 1081 aaKnown RBP8.16□□□□□ -1.1
PFKM-231ENST00000553055 STYXQ8WUJ0 223 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 DPF2Q92785 391 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 NSUN4Q96CB9 384 aaKnown RBP8.16□□□□□ -1.1
PFKM-231ENST00000553055 NMD3Q96D46 503 aaKnown RBP8.16□□□□□ -1.1
PFKM-231ENST00000553055 CNDP2Q96KP4 475 aaKnown RBP8.16□□□□□ -1.1
PFKM-231ENST00000553055 SNX22Q96L94 193 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 XPO4Q9C0E2 1151 aaKnown RBP8.16□□□□□ -1.1
PFKM-231ENST00000553055 SLC6A20Q9NP91 592 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 KCND1Q9NSA2 647 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 SACM1LQ9NTJ5 587 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 ABCF3Q9NUQ8 709 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 PRSS50Q9UI38 385 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 HERC5Q9UII4 1024 aaKnown RBP8.16□□□□□ -1.1
PFKM-231ENST00000553055 ZNF112Q9UJU3 913 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 TMPRSS11EQ9UL52 423 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 KIAA1107Q9UPP5 1409 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 ZNF281Q9Y2X9 895 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 STARD13Q9Y3M8 1113 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 PCDHB1Q9Y5F3 818 aa8.16□□□□□ -1.1
PFKM-231ENST00000553055 UBR1Q8IWV7 1749 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 ERVK-7P63135 1459 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 NCOA3Q9Y6Q9 1424 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 TMEM2Q9UHN6 1383 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 SHISA3A0PJX4 238 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 PRAMEF25A6NGN4 478 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 HMX3A6NHT5 357 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 DLL1O00548 723 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 BUB1BO60566 1050 aaPredicted RBP8.15□□□□□ -1.1
PFKM-231ENST00000553055 SCGB1D1O95968 90 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 BCRP11274 1271 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 MTHFD1P11586 935 aaKnown RBP8.15□□□□□ -1.1
PFKM-231ENST00000553055 GYS1P13807 737 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 AOAHP28039 575 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 HOXD13P35453 343 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 PPARAQ07869 468 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 ADCY2Q08462 1091 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 MGAT2Q10469 447 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 FSTL1Q12841 308 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 PPP2R5CQ13362 524 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 SEC23AQ15436 765 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 TSTQ16762 297 aaKnown RBP8.15□□□□□ -1.1
PFKM-231ENST00000553055 GJC2Q5T442 439 aaPredicted RBP8.15□□□□□ -1.1
PFKM-231ENST00000553055 SFRP5Q5T4F7 317 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 ARL6IP4Q66PJ3 421 aaKnown RBP8.15□□□□□ -1.1
PFKM-231ENST00000553055 NUGGCQ68CJ6 796 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 FDX2Q6P4F2 183 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 BTNL9Q6UXG8 535 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 KCTD1Q719H9 257 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 GALNTL5Q7Z4T8 443 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 ERC1Q8IUD2 1116 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 SH2D3CQ8N5H7 860 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 CCDC150Q8NCX0 1101 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 PIP4K2CQ8TBX8 421 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 BRIX1Q8TDN6 353 aaKnown RBP8.15□□□□□ -1.1
PFKM-231ENST00000553055 AFG1LQ8WV93 481 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 RILPL2Q969X0 211 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 Q96M66 194 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 PRDM12Q9H4Q4 367 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 TMEM160Q9NX00 188 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 COL20A1Q9P218 1284 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 ABCF2Q9UG63 623 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 PAXBP1Q9Y5B6 917 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 PCDHA13Q9Y5I0 950 aa8.15□□□□□ -1.1
PFKM-231ENST00000553055 TET3O43151 1660 aa8.14□□□□□ -1.11
PFKM-231ENST00000553055 SOS1Q07889 1333 aaPredicted RBP8.14□□□□□ -1.11
PFKM-231ENST00000553055 FAM234BA2RU67 622 aa8.14□□□□□ -1.11
PFKM-231ENST00000553055 CDC14CA4D256 554 aa8.14□□□□□ -1.11
PFKM-231ENST00000553055 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.14□□□□□ -1.11
PFKM-231ENST00000553055 TBCAO75347 108 aaKnown RBP8.14□□□□□ -1.11
PFKM-231ENST00000553055 TNFRSF6BO95407 300 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms