RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 RALGPS2Q86X27 583 aaPredicted RBP5.8□□□□□ -1.48
CKAP4-203ENST00000553039 MFSD6LQ8IWD5 586 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 ANKK1Q8NFD2 765 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 TCEAL3Q969E4 200 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 EXOC4Q96A65 974 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 FAM167AQ96KS9 214 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 MXRA8Q9BRK3 442 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 KRT23Q9C075 422 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 DUSP15Q9H1R2 295 aaPredicted RBP5.8□□□□□ -1.48
CKAP4-203ENST00000553039 RSAD1Q9HA92 442 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 PRDM9Q9NQV7 894 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 ZSWIM5Q9P217 1185 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 STIM2Q9P246 746 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 DNMT3BQ9UBC3 853 aaKnown RBP5.8□□□□□ -1.48
CKAP4-203ENST00000553039 DKK4Q9UBT3 224 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 TMA7Q9Y2S6 64 aaKnown RBP5.8□□□□□ -1.48
CKAP4-203ENST00000553039 RAXQ9Y2V3 346 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 PRG3Q9Y2Y8 225 aaPredicted RBP5.8□□□□□ -1.48
CKAP4-203ENST00000553039 PCDHB2Q9Y5E7 798 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 IGSF10Q6WRI0 2623 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 FRYQ5TBA9 3013 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 SPAARA0A1B0GVQ0 90 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 TLDC2A0PJX2 215 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 MEIS2O14770 477 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 MEFVO15553 781 aaPredicted RBP5.79□□□□□ -1.48
CKAP4-203ENST00000553039 POMCP01189 267 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 GBP1P32455 592 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 ELF1P32519 619 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 GPC3P51654 580 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 HAND2P61296 217 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 AMPD2Q01433 879 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 SPIRE1Q08AE8 756 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 PSMD2Q13200 908 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 GRM2Q14416 872 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 VPS53Q5VIR6 699 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 ALG1LQ6GMV1 187 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 CATSPER4Q7RTX7 472 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 KRT25Q7Z3Z0 450 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 COLGALT2Q8IYK4 626 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 RNF168Q8IYW5 571 aaPredicted RBP5.79□□□□□ -1.48
CKAP4-203ENST00000553039 ZNF843Q8N446 348 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 ENAHQ8N8S7 591 aaPredicted RBP5.79□□□□□ -1.48
CKAP4-203ENST00000553039 ZNF511Q8NB15 262 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 SCG3Q8WXD2 468 aaKnown RBP5.79□□□□□ -1.48
CKAP4-203ENST00000553039 SMARCD2Q92925 531 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 RRP36Q96EU6 259 aaKnown RBP5.79□□□□□ -1.48
CKAP4-203ENST00000553039 FRMD6Q96NE9 622 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 SAP130Q9H0E3 1048 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 RBM12Q9NTZ6 932 aaKnown RBP5.79□□□□□ -1.48
CKAP4-203ENST00000553039 SEC63Q9UGP8 760 aaKnown RBP5.79□□□□□ -1.48
CKAP4-203ENST00000553039 TCEAL9Q9UHQ7 104 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 EVLQ9UI08 416 aaPredicted RBP5.79□□□□□ -1.48
CKAP4-203ENST00000553039 MAD2L2Q9UI95 211 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 FBXW11Q9UKB1 542 aa5.79□□□□□ -1.48
CKAP4-203ENST00000553039 PIN4Q9Y237 131 aaKnown RBP5.79□□□□□ -1.48
CKAP4-203ENST00000553039 TTC41PQ6P2S7 1318 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 BPTFQ12830 3046 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 MIA3Q5JRA6 1907 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 A0A087WV48 116 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 MYBPHLA2RUH7 354 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 ZBTB42B2RXF5 422 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 TNFRSF10BO14763 440 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 CHADO15335 359 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 EXTL3O43909 919 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 EFEMP2O95967 443 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 PSAPP07602 524 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 RHOP08100 348 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 ITGA4P13612 1032 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 FGFR4P22455 802 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 SMARCA1P28370 1054 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 GNA15P30679 374 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 ABCG1P45844 678 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 MAPK8P45983 427 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 PXNP49023 591 aaPredicted RBP5.78□□□□□ -1.48
CKAP4-203ENST00000553039 CLCN3P51790 818 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 CFHR1Q03591 330 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 GRSF1Q12849 480 aaKnown RBP eCLIP5.78□□□□□ -1.48
CKAP4-203ENST00000553039 ELAVL2Q12926 359 aaKnown RBP5.78□□□□□ -1.48
CKAP4-203ENST00000553039 SEMA3BQ13214 749 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 RAB33AQ14088 237 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 TRIP6Q15654 476 aaKnown RBP5.78□□□□□ -1.48
CKAP4-203ENST00000553039 MAPK6Q16659 721 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 CEP55Q53EZ4 464 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 FAM78AQ5JUQ0 283 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 IQCEQ6IPM2 695 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 FUT10Q6P4F1 479 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 LRRC69Q6ZNQ3 347 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 TRMT1LQ7Z2T5 733 aaKnown RBP5.78□□□□□ -1.48
CKAP4-203ENST00000553039 CYP2U1Q7Z449 544 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 PIP4P1Q86T03 277 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 ZNF410Q86VK4 478 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 TEX2Q8IWB9 1127 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 SIRT2Q8IXJ6 389 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 HACE1Q8IYU2 909 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 CCDC26Q8TAB7 109 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 SLC7A14Q8TBB6 771 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 FBF1Q8TES7 1133 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 ADAMTS14Q8WXS8 1223 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 ING5Q8WYH8 240 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 BAP1Q92560 729 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms