RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 KIF4AO95239 1232 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 FAM163BP0C2L3 166 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 EPB41P11171 864 aaKnown RBP11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 P4HA1P13674 534 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 PSMC2P35998 433 aaKnown RBP11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 RBP5P82980 135 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 DSG1Q02413 1049 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 CETN1Q12798 172 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 SMARCB1Q12824 385 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 ADAM9Q13443 819 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 PSMD6Q15008 389 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 ZBTB6Q15916 424 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 SKOR2Q2VWA4 1001 aaPredicted RBP11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 SV2CQ496J9 727 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 METTL23Q86XA0 190 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 NELFCDQ8IXH7 590 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 EFHBQ8N7U6 833 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 CEP120Q8N960 986 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 MLKLQ8NB16 471 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 CCDC150Q8NCX0 1101 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 TMC2Q8TDI7 906 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 ATXN2LQ8WWM7 1075 aaKnown RBP11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 CASP10Q92851 521 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 PABPC5Q96DU9 382 aaKnown RBP11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 CBWD1Q9BRT8 395 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 ZBP1Q9H171 429 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 PLEKHA4Q9H4M7 779 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 CHST7Q9NS84 486 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 DNAJB4Q9UDY4 337 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 CASTOR2A6NHX0 329 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 SLC16A3O15427 465 aaKnown RBP11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 TGFB1I1O43294 461 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 NR3C1P04150 777 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 ODC1P11926 461 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 TNNI1P19237 187 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 NR2F2P24468 414 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 KLRC2P26717 231 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 ATICP31939 592 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 GTF2H1P32780 548 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 CA8P35219 290 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 NDUFV1P49821 464 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 TAF6P49848 677 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 CYP2J2P51589 502 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 TFAMQ00059 246 aaKnown RBP11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 KCNA1Q09470 495 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 ADGRE1Q14246 886 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 NAB2Q15742 525 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 SMYD5Q6GMV2 418 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 CENPPQ6IPU0 288 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 DPH6Q7L8W6 267 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 TMEM86AQ8N2M4 240 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 KIAA0895Q8NCT3 520 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 NOC3LQ8WTT2 800 aaKnown RBP11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 PIK3R5Q8WYR1 880 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 FAXDC2Q96IV6 333 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 CHAMP1Q96JM3 812 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 SUSD3Q96L08 255 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 MFSD14AQ96MC6 490 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 CEP63Q96MT8 703 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 IMPG2Q9BZV3 1241 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 KCTD10Q9H3F6 313 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 CLSTN2Q9H4D0 955 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 PCIF1Q9H4Z3 704 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 FAM124BQ9H5Z6 455 aaPredicted RBP11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 DMAC2Q9NW81 257 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 MIOSQ9NXC5 875 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 DPP3Q9NY33 737 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 USP20Q9Y2K6 914 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 BACE2Q9Y5Z0 518 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 PRRC2BQ5JSZ5 2229 aaKnown RBP11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 TRANK1O15050 2925 aa11.1□□□□□ -0.63
TRAFD1-208ENST00000552890 CHD9Q3L8U1 2897 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 NT5C1B-RDH14C9J2C7 533 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 GADD45BO75293 160 aaPredicted RBP11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 ARHGEF15O94989 841 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 SLC34A2O95436 690 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 TYMPP19971 482 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 CCNE1P24864 410 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 CASP1P29466 404 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 MCM4P33991 863 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 CLCNKBP51801 687 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 MRPS5P82675 430 aaKnown RBP11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 CYP24A1Q07973 514 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 TRPC3Q13507 836 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 DUSP6Q16828 381 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 GLRA4Q5JXX5 417 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 FAM171A1Q5VUB5 890 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 PLPP4Q5VZY2 271 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 JADE1Q6IE81 842 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 ZNF280DQ6N043 979 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 DSTYKQ6XUX3 929 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 TMEM184AQ6ZMB5 413 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 ADSSL1Q8N142 457 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 THEM5Q8N1Q8 247 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 MICALL1Q8N3F8 863 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 TTC39CQ8N584 583 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 TAF4BQ92750 862 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 SAAL1Q96ER3 474 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 RXFP1Q9HBX9 757 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms