RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 TCEAL8Q8IYN2 117 aa12.99□□□□□ -0.33
CKAP4-202ENST00000552828 KIAA2013Q8IYS2 634 aa12.99□□□□□ -0.33
CKAP4-202ENST00000552828 IGSF22Q8N9C0 903 aa12.99□□□□□ -0.33
CKAP4-202ENST00000552828 ACO2Q99798 780 aaKnown RBP12.99□□□□□ -0.33
CKAP4-202ENST00000552828 TMEM134Q9H6X4 195 aa12.99□□□□□ -0.33
CKAP4-202ENST00000552828 GOLGA2P5Q9HBQ8 144 aa12.99□□□□□ -0.33
CKAP4-202ENST00000552828 POLD4Q9HCU8 107 aa12.99□□□□□ -0.33
CKAP4-202ENST00000552828 LTB4R2Q9NPC1 389 aa12.99□□□□□ -0.33
CKAP4-202ENST00000552828 TOPORSQ9NS56 1045 aaPredicted RBP12.99□□□□□ -0.33
CKAP4-202ENST00000552828 FOXD4L1Q9NU39 408 aa12.99□□□□□ -0.33
CKAP4-202ENST00000552828 SLC38A7Q9NVC3 462 aa12.99□□□□□ -0.33
CKAP4-202ENST00000552828 LRWD1Q9UFC0 647 aa12.99□□□□□ -0.33
CKAP4-202ENST00000552828 KIAA1024Q9UPX6 916 aa12.99□□□□□ -0.33
CKAP4-202ENST00000552828 MRPS23Q9Y3D9 190 aaKnown RBP12.99□□□□□ -0.33
CKAP4-202ENST00000552828 PCDHGA2Q9Y5H1 932 aa12.99□□□□□ -0.33
CKAP4-202ENST00000552828 STK24Q9Y6E0 443 aa12.99□□□□□ -0.33
CKAP4-202ENST00000552828 NCOR2Q9Y618 2525 aa12.99□□□□□ -0.33
CKAP4-202ENST00000552828 CACNA1IQ9P0X4 2223 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 PHLPP2Q6ZVD8 1323 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 SHISA7A6NL88 538 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 I3L4J1 428 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 ABLIM1O14639 778 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 SYN3O14994 580 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 SPTLC1O15269 473 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 LAMTOR5O43504 91 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 KINO60870 393 aaKnown RBP12.98□□□□□ -0.33
CKAP4-202ENST00000552828 ATF2P15336 505 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 KCNE1P15382 129 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 PTPN2P17706 415 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 PROZP22891 400 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 RPL9P32969 192 aaKnown RBP12.98□□□□□ -0.33
CKAP4-202ENST00000552828 CCT6AP40227 531 aaKnown RBP12.98□□□□□ -0.33
CKAP4-202ENST00000552828 BRCC3P46736 316 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 RPS9P46781 194 aaKnown RBP12.98□□□□□ -0.33
CKAP4-202ENST00000552828 NPTX2P47972 431 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 YARSP54577 528 aaKnown RBP12.98□□□□□ -0.33
CKAP4-202ENST00000552828 ROR1Q01973 937 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 FZD5Q13467 585 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 UBXN2BQ14CS0 331 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 PRSS36Q5K4E3 855 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 TTC38Q5R3I4 469 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 VARS2Q5ST30 1063 aaKnown RBP12.98□□□□□ -0.33
CKAP4-202ENST00000552828 ZBTB41Q5SVQ8 909 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 DAW1Q8N136 415 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 CEP120Q8N960 986 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 ZBTB44Q8NCP5 570 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 ELSPBP1Q96BH3 223 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 ZMAT2Q96NC0 199 aaKnown RBP12.98□□□□□ -0.33
CKAP4-202ENST00000552828 CCDC94Q9BW85 323 aaPredicted RBP12.98□□□□□ -0.33
CKAP4-202ENST00000552828 PLA2G2FQ9BZM2 168 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 CDT1Q9H211 546 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 SPATA6Q9NWH7 488 aaPredicted RBP12.98□□□□□ -0.33
CKAP4-202ENST00000552828 DLL3Q9NYJ7 618 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 ARHGAP28Q9P2N2 729 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 DOCK6Q96HP0 2047 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 VWA8A3KMH1 1905 aa12.98□□□□□ -0.33
CKAP4-202ENST00000552828 NOTCH4Q99466 2003 aa12.97□□□□□ -0.33
CKAP4-202ENST00000552828 WDR27A2RRH5 827 aa12.97□□□□□ -0.33
CKAP4-202ENST00000552828 PODXLO00592 558 aa12.97□□□□□ -0.33
CKAP4-202ENST00000552828 MCF2P10911 925 aa12.97□□□□□ -0.33
CKAP4-202ENST00000552828 CD72P21854 359 aa12.97□□□□□ -0.33
CKAP4-202ENST00000552828 FCARP24071 287 aa12.97□□□□□ -0.33
CKAP4-202ENST00000552828 PUM1Q14671 1186 aaKnown RBP eCLIP12.97□□□□□ -0.33
CKAP4-202ENST00000552828 RILPL1Q5EBL4 403 aa12.97□□□□□ -0.33
CKAP4-202ENST00000552828 TPGS2Q68CL5 300 aa12.97□□□□□ -0.33
CKAP4-202ENST00000552828 TANGO2Q6ICL3 276 aa12.97□□□□□ -0.33
CKAP4-202ENST00000552828 ZNF852Q6ZMS4 543 aa12.97□□□□□ -0.33
CKAP4-202ENST00000552828 MAMSTRQ6ZN01 415 aa12.97□□□□□ -0.33
CKAP4-202ENST00000552828 TAS1R3Q7RTX0 852 aa12.97□□□□□ -0.33
CKAP4-202ENST00000552828 ZNF687Q8N1G0 1237 aa12.97□□□□□ -0.33
CKAP4-202ENST00000552828 ING5Q8WYH8 240 aa12.97□□□□□ -0.33
CKAP4-202ENST00000552828 DNASE1L2Q92874 299 aa12.97□□□□□ -0.33
CKAP4-202ENST00000552828 MCRS1Q96EZ8 462 aa12.97□□□□□ -0.33
CKAP4-202ENST00000552828 NTPCRQ9BSD7 190 aaKnown RBP12.97□□□□□ -0.33
CKAP4-202ENST00000552828 MRPL4Q9BYD3 311 aaKnown RBP12.97□□□□□ -0.33
CKAP4-202ENST00000552828 C17orf75Q9HAS0 396 aa12.97□□□□□ -0.33
CKAP4-202ENST00000552828 DDX19AQ9NUU7 478 aaKnown RBP12.97□□□□□ -0.33
CKAP4-202ENST00000552828 CNTN3Q9P232 1028 aa12.97□□□□□ -0.33
CKAP4-202ENST00000552828 MAFFQ9ULX9 164 aa12.97□□□□□ -0.33
CKAP4-202ENST00000552828 COL4A3Q01955 1670 aa12.96□□□□□ -0.33
CKAP4-202ENST00000552828 VPS37CA5D8V6 355 aaPredicted RBP12.96□□□□□ -0.33
CKAP4-202ENST00000552828 CCDC169A6NNP5 214 aa12.96□□□□□ -0.33
CKAP4-202ENST00000552828 H7C4K7 107 aa12.96□□□□□ -0.33
CKAP4-202ENST00000552828 NCAM2O15394 837 aa12.96□□□□□ -0.33
CKAP4-202ENST00000552828 MEFVO15553 781 aaPredicted RBP12.96□□□□□ -0.33
CKAP4-202ENST00000552828 LILRB5O75023 590 aa12.96□□□□□ -0.33
CKAP4-202ENST00000552828 SEC24AO95486 1093 aa12.96□□□□□ -0.33
CKAP4-202ENST00000552828 LRG1P02750 347 aa12.96□□□□□ -0.33
CKAP4-202ENST00000552828 CEBPBP17676 345 aa12.96□□□□□ -0.33
CKAP4-202ENST00000552828 SYT1P21579 422 aa12.96□□□□□ -0.33
CKAP4-202ENST00000552828 TARSP26639 723 aaKnown RBP12.96□□□□□ -0.33
CKAP4-202ENST00000552828 ELF1P32519 619 aa12.96□□□□□ -0.33
CKAP4-202ENST00000552828 TOB1P50616 345 aaPredicted RBP12.96□□□□□ -0.33
CKAP4-202ENST00000552828 PEX3P56589 373 aa12.96□□□□□ -0.33
CKAP4-202ENST00000552828 CSTF1Q05048 431 aaKnown RBP12.96□□□□□ -0.33
CKAP4-202ENST00000552828 ZNF568Q3ZCX4 644 aa12.96□□□□□ -0.33
CKAP4-202ENST00000552828 TPRG1Q6ZUI0 275 aa12.96□□□□□ -0.33
CKAP4-202ENST00000552828 DGLUCYQ7Z3D6 616 aa12.96□□□□□ -0.33
CKAP4-202ENST00000552828 DCLK2Q8N568 766 aa12.96□□□□□ -0.33
CKAP4-202ENST00000552828 ACAP3Q96P50 834 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms