RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 AP5M1Q9H0R1 490 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 DEF6Q9H4E7 631 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 MINDY3Q9H8M7 445 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 PDE11AQ9HCR9 933 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 LZTFL1Q9NQ48 299 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 NOCTQ9UK39 431 aaKnown RBP10.58□□□□□ -0.72
TMEM116-216ENST00000552800 ANKRD62A6NC57 917 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 EFCAB8A8MWE9 144 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 GPR25O00155 361 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 TACC1O75410 805 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 TMEM253P0C7T8 217 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 SMIM10L2AP0DMW4 78 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 SMIM10L2BP0DMW5 78 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 CYP2B6P20813 491 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 HOXA11P31270 313 aaPredicted RBP10.57□□□□□ -0.72
TMEM116-216ENST00000552800 ATICP31939 592 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 PSMC4P43686 418 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 ACOT2P49753 483 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 CLCN3P51790 818 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 PRMT2P55345 433 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 WNT7BP56706 349 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 SP3Q02447 781 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 ZBTB6Q15916 424 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 WHAMMP3Q1A5X7 153 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 KIAA0753Q2KHM9 967 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 SGSM1Q2NKQ1 1148 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 TAF2Q6P1X5 1199 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 GJB7Q6PEY0 223 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 ALKAL1Q6UXT8 129 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 RSRC2Q7L4I2 434 aaKnown RBP10.57□□□□□ -0.72
TMEM116-216ENST00000552800 KIAA1328Q86T90 577 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 METTL13Q8N6R0 699 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 EPS8L1Q8TE68 723 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 LMBR1Q8WVP7 490 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 CCDC127Q96BQ5 260 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 VCPIP1Q96JH7 1222 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 MAP7D2Q96T17 732 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 AGPAT1Q99943 283 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 CDT1Q9H211 546 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 ABCB6Q9NP58 842 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 TSR3Q9UJK0 312 aaKnown RBP10.57□□□□□ -0.72
TMEM116-216ENST00000552800 SALL4Q9UJQ4 1053 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 C2CD2Q9Y426 696 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 PCDHB2Q9Y5E7 798 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 DUSP10Q9Y6W6 482 aa10.57□□□□□ -0.72
TMEM116-216ENST00000552800 TSPAN1O60635 241 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 ADAMTS4O75173 837 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 RTN2O75298 545 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 LRRN2O75325 713 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 HLA-DRAP01903 254 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 FAM163BP0C2L3 166 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 ZNF286BP0CG31 522 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 DARSP14868 501 aaKnown RBP10.56□□□□□ -0.72
TMEM116-216ENST00000552800 CYP11B1P15538 503 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 CHRNB2P17787 502 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 ARF4P18085 180 aaPredicted RBP10.56□□□□□ -0.72
TMEM116-216ENST00000552800 EIF4BP23588 611 aaKnown RBP10.56□□□□□ -0.72
TMEM116-216ENST00000552800 HOXD10P28358 340 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 GRM5P41594 1212 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 FLT3LGP49771 235 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 APLP1P51693 650 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 ZNF132P52740 706 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 CRYBB1P53674 252 aaPredicted RBP10.56□□□□□ -0.72
TMEM116-216ENST00000552800 CDR2Q01850 454 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 MAP2K1Q02750 393 aaPredicted RBP10.56□□□□□ -0.72
TMEM116-216ENST00000552800 PTPN11Q06124 597 aaPredicted RBP10.56□□□□□ -0.72
TMEM116-216ENST00000552800 ENOX2Q16206 610 aaKnown RBP10.56□□□□□ -0.72
TMEM116-216ENST00000552800 FSCN1Q16658 493 aaKnown RBP10.56□□□□□ -0.72
TMEM116-216ENST00000552800 IFI16Q16666 785 aaKnown RBP10.56□□□□□ -0.72
TMEM116-216ENST00000552800 DCAF4L1Q3SXM0 396 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 TDRD12Q587J7 1177 aaKnown RBP10.56□□□□□ -0.72
TMEM116-216ENST00000552800 WDR44Q5JSH3 913 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 APBB1IPQ7Z5R6 666 aaPredicted RBP10.56□□□□□ -0.72
TMEM116-216ENST00000552800 CEP112Q8N8E3 955 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 LNX1Q8TBB1 728 aaPredicted RBP10.56□□□□□ -0.72
TMEM116-216ENST00000552800 TRIB2Q92519 343 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 ANKRD7Q92527 254 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 NOX5Q96PH1 765 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 MTG1Q9BT17 334 aaPredicted RBP10.56□□□□□ -0.72
TMEM116-216ENST00000552800 TRAIPQ9BWF2 469 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 GCOM2Q9BZD3 368 aaPredicted RBP10.56□□□□□ -0.72
TMEM116-216ENST00000552800 XYLT2Q9H1B5 865 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 PDZD7Q9H5P4 517 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 SETD4Q9NVD3 440 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 WBP1LQ9NX94 342 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 ABT1Q9ULW3 272 aaKnown RBP10.56□□□□□ -0.72
TMEM116-216ENST00000552800 GUCA1BQ9UMX6 200 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.56□□□□□ -0.72
TMEM116-216ENST00000552800 SQORQ9Y6N5 450 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 PTPRJQ12913 1337 aa10.56□□□□□ -0.72
TMEM116-216ENST00000552800 TRIP12Q14669 1992 aaPredicted RBP10.56□□□□□ -0.72
TMEM116-216ENST00000552800 UQCRHLA0A096LP55 91 aa10.55□□□□□ -0.72
TMEM116-216ENST00000552800 INO80B-WBP1J3KQ70 363 aa10.55□□□□□ -0.72
TMEM116-216ENST00000552800 LCE2BO14633 110 aa10.55□□□□□ -0.72
TMEM116-216ENST00000552800 MEFVO15553 781 aaPredicted RBP10.55□□□□□ -0.72
TMEM116-216ENST00000552800 TADA3O75528 432 aa10.55□□□□□ -0.72
TMEM116-216ENST00000552800 CST3P01034 146 aaPredicted RBP10.55□□□□□ -0.72
TMEM116-216ENST00000552800 CYP1A1P04798 512 aaPredicted RBP10.55□□□□□ -0.72
TMEM116-216ENST00000552800 TUBBP07437 444 aa10.55□□□□□ -0.72
TMEM116-216ENST00000552800 UQCRHP07919 91 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms