RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 TMEM60Q9H2L4 133 aa15.59■□□□□ 0.09
CHMP1A-210ENST00000551981 ZFP14Q9HCL3 533 aa15.59■□□□□ 0.09
CHMP1A-210ENST00000551981 SLC38A7Q9NVC3 462 aa15.59■□□□□ 0.09
CHMP1A-210ENST00000551981 RAB23Q9ULC3 237 aa15.59■□□□□ 0.09
CHMP1A-210ENST00000551981 KMT2BQ9UMN6 2715 aaPredicted RBP15.59■□□□□ 0.09
CHMP1A-210ENST00000551981 F5P12259 2224 aa15.58■□□□□ 0.08
CHMP1A-210ENST00000551981 SMIM28A0A1B0GU29 152 aa15.58■□□□□ 0.08
CHMP1A-210ENST00000551981 H7C4K7 107 aa15.58■□□□□ 0.08
CHMP1A-210ENST00000551981 ABLIM3O94929 683 aa15.58■□□□□ 0.08
CHMP1A-210ENST00000551981 BRCC3P46736 316 aa15.58■□□□□ 0.08
CHMP1A-210ENST00000551981 ATXN1P54253 815 aaKnown RBP15.58■□□□□ 0.08
CHMP1A-210ENST00000551981 SAFBQ15424 915 aaKnown RBP eCLIP15.58■□□□□ 0.08
CHMP1A-210ENST00000551981 CYP4A22Q5TCH4 519 aa15.58■□□□□ 0.08
CHMP1A-210ENST00000551981 HAUS3Q68CZ6 603 aa15.58■□□□□ 0.08
CHMP1A-210ENST00000551981 PDZD4Q76G19 769 aaPredicted RBP15.58■□□□□ 0.08
CHMP1A-210ENST00000551981 TCEAL8Q8IYN2 117 aa15.58■□□□□ 0.08
CHMP1A-210ENST00000551981 ELMOD1Q8N336 334 aa15.58■□□□□ 0.08
CHMP1A-210ENST00000551981 NECAB1Q8N987 351 aa15.58■□□□□ 0.08
CHMP1A-210ENST00000551981 KIFAP3Q92845 792 aa15.58■□□□□ 0.08
CHMP1A-210ENST00000551981 IRF7Q92985 503 aa15.58■□□□□ 0.08
CHMP1A-210ENST00000551981 KIFC3Q9BVG8 833 aa15.58■□□□□ 0.08
CHMP1A-210ENST00000551981 TRMT61BQ9BVS5 477 aaKnown RBP15.58■□□□□ 0.08
CHMP1A-210ENST00000551981 CCDC94Q9BW85 323 aaPredicted RBP15.58■□□□□ 0.08
CHMP1A-210ENST00000551981 CYP4F11Q9HBI6 524 aa15.58■□□□□ 0.08
CHMP1A-210ENST00000551981 GOLGA2P5Q9HBQ8 144 aa15.58■□□□□ 0.08
CHMP1A-210ENST00000551981 NDRG2Q9UN36 371 aaKnown RBP15.58■□□□□ 0.08
CHMP1A-210ENST00000551981 WDR27A2RRH5 827 aa15.57■□□□□ 0.08
CHMP1A-210ENST00000551981 K7ERI5 159 aa15.57■□□□□ 0.08
CHMP1A-210ENST00000551981 SYN3O14994 580 aa15.57■□□□□ 0.08
CHMP1A-210ENST00000551981 ATF2P15336 505 aa15.57■□□□□ 0.08
CHMP1A-210ENST00000551981 MUTP22033 750 aa15.57■□□□□ 0.08
CHMP1A-210ENST00000551981 IGFBP6P24592 240 aaPredicted RBP15.57■□□□□ 0.08
CHMP1A-210ENST00000551981 FOSBP53539 338 aa15.57■□□□□ 0.08
CHMP1A-210ENST00000551981 ARPP19P56211 112 aa15.57■□□□□ 0.08
CHMP1A-210ENST00000551981 ANAPC15P60006 121 aa15.57■□□□□ 0.08
CHMP1A-210ENST00000551981 FZD5Q13467 585 aa15.57■□□□□ 0.08
CHMP1A-210ENST00000551981 GRM2Q14416 872 aa15.57■□□□□ 0.08
CHMP1A-210ENST00000551981 FAM78AQ5JUQ0 283 aa15.57■□□□□ 0.08
CHMP1A-210ENST00000551981 PRSS36Q5K4E3 855 aa15.57■□□□□ 0.08
CHMP1A-210ENST00000551981 NT5DC1Q5TFE4 455 aa15.57■□□□□ 0.08
CHMP1A-210ENST00000551981 IQCEQ6IPM2 695 aa15.57■□□□□ 0.08
CHMP1A-210ENST00000551981 CD300LGQ6UXG3 332 aa15.57■□□□□ 0.08
CHMP1A-210ENST00000551981 C3orf58Q8NDZ4 430 aa15.57■□□□□ 0.08
CHMP1A-210ENST00000551981 CNTNAP3BQ96NU0 1288 aa15.57■□□□□ 0.08
CHMP1A-210ENST00000551981 RTKNQ9BST9 563 aa15.57■□□□□ 0.08
CHMP1A-210ENST00000551981 CNTNAP3Q9BZ76 1288 aa15.57■□□□□ 0.08
CHMP1A-210ENST00000551981 CHRDQ9H2X0 955 aa15.57■□□□□ 0.08
CHMP1A-210ENST00000551981 TNFSF13BQ9Y275 285 aa15.57■□□□□ 0.08
CHMP1A-210ENST00000551981 TICRRQ7Z2Z1 1910 aa15.56■□□□□ 0.08
CHMP1A-210ENST00000551981 PODXLO00592 558 aa15.56■□□□□ 0.08
CHMP1A-210ENST00000551981 OR52Z1P0C646 297 aa15.56■□□□□ 0.08
CHMP1A-210ENST00000551981 PSMC3P17980 439 aa15.56■□□□□ 0.08
CHMP1A-210ENST00000551981 FCARP24071 287 aa15.56■□□□□ 0.08
CHMP1A-210ENST00000551981 GRM5P41594 1212 aa15.56■□□□□ 0.08
CHMP1A-210ENST00000551981 CCR3P51677 355 aa15.56■□□□□ 0.08
CHMP1A-210ENST00000551981 ORC2Q13416 577 aaPredicted RBP15.56■□□□□ 0.08
CHMP1A-210ENST00000551981 ME3Q16798 604 aa15.56■□□□□ 0.08
CHMP1A-210ENST00000551981 ZNF568Q3ZCX4 644 aa15.56■□□□□ 0.08
CHMP1A-210ENST00000551981 TPGS2Q68CL5 300 aa15.56■□□□□ 0.08
CHMP1A-210ENST00000551981 MAMSTRQ6ZN01 415 aa15.56■□□□□ 0.08
CHMP1A-210ENST00000551981 NSUN7Q8NE18 718 aaKnown RBP15.56■□□□□ 0.08
CHMP1A-210ENST00000551981 SMARCD2Q92925 531 aa15.56■□□□□ 0.08
CHMP1A-210ENST00000551981 ASB16Q96NS5 453 aa15.56■□□□□ 0.08
CHMP1A-210ENST00000551981 TRPV5Q9NQA5 729 aa15.56■□□□□ 0.08
CHMP1A-210ENST00000551981 NUB1Q9Y5A7 615 aa15.56■□□□□ 0.08
CHMP1A-210ENST00000551981 INSL5Q9Y5Q6 135 aa15.56■□□□□ 0.08
CHMP1A-210ENST00000551981 PHLPP2Q6ZVD8 1323 aa15.56■□□□□ 0.08
CHMP1A-210ENST00000551981 CITO14578 2027 aa15.56■□□□□ 0.08
CHMP1A-210ENST00000551981 GDI1P31150 447 aa15.55■□□□□ 0.08
CHMP1A-210ENST00000551981 RPL9P32969 192 aaKnown RBP15.55■□□□□ 0.08
CHMP1A-210ENST00000551981 SOX4Q06945 474 aaPredicted RBP15.55■□□□□ 0.08
CHMP1A-210ENST00000551981 XKR4Q5GH76 650 aa15.55■□□□□ 0.08
CHMP1A-210ENST00000551981 LAIR1Q6GTX8 287 aa15.55■□□□□ 0.08
CHMP1A-210ENST00000551981 ALKAL1Q6UXT8 129 aa15.55■□□□□ 0.08
CHMP1A-210ENST00000551981 ZNF687Q8N1G0 1237 aa15.55■□□□□ 0.08
CHMP1A-210ENST00000551981 CELF5Q8N6W0 485 aaKnown RBP15.55■□□□□ 0.08
CHMP1A-210ENST00000551981 LEMD2Q8NC56 503 aa15.55■□□□□ 0.08
CHMP1A-210ENST00000551981 DEPDC1BQ8WUY9 529 aa15.55■□□□□ 0.08
CHMP1A-210ENST00000551981 FAM3CQ92520 227 aa15.55■□□□□ 0.08
CHMP1A-210ENST00000551981 TCEAL4Q96EI5 215 aa15.55■□□□□ 0.08
CHMP1A-210ENST00000551981 ZNF512Q96ME7 567 aaPredicted RBP15.55■□□□□ 0.08
CHMP1A-210ENST00000551981 MRPL4Q9BYD3 311 aaKnown RBP15.55■□□□□ 0.08
CHMP1A-210ENST00000551981 BHMT2Q9H2M3 363 aa15.55■□□□□ 0.08
CHMP1A-210ENST00000551981 ZNF334Q9HCZ1 680 aaPredicted RBP15.55■□□□□ 0.08
CHMP1A-210ENST00000551981 MAFFQ9ULX9 164 aa15.55■□□□□ 0.08
CHMP1A-210ENST00000551981 PIAS3Q9Y6X2 628 aa15.55■□□□□ 0.08
CHMP1A-210ENST00000551981 COL4A2P08572 1712 aa15.54■□□□□ 0.08
CHMP1A-210ENST00000551981 SHISA7A6NL88 538 aa15.54■□□□□ 0.08
CHMP1A-210ENST00000551981 CCDC169A6NNP5 214 aa15.54■□□□□ 0.08
CHMP1A-210ENST00000551981 JAK2O60674 1132 aa15.54■□□□□ 0.08
CHMP1A-210ENST00000551981 SEC24AO95486 1093 aa15.54■□□□□ 0.08
CHMP1A-210ENST00000551981 TDGF1P13385 188 aa15.54■□□□□ 0.08
CHMP1A-210ENST00000551981 CCT6AP40227 531 aaKnown RBP15.54■□□□□ 0.08
CHMP1A-210ENST00000551981 OSTNP61366 133 aa15.54■□□□□ 0.08
CHMP1A-210ENST00000551981 CTXN3Q4LDR2 81 aa15.54■□□□□ 0.08
CHMP1A-210ENST00000551981 ZNF280DQ6N043 979 aa15.54■□□□□ 0.08
CHMP1A-210ENST00000551981 POTEHQ6S545 545 aa15.54■□□□□ 0.08
CHMP1A-210ENST00000551981 APPL2Q8NEU8 664 aa15.54■□□□□ 0.08
CHMP1A-210ENST00000551981 ACO2Q99798 780 aaKnown RBP15.54■□□□□ 0.08
CHMP1A-210ENST00000551981 CDT1Q9H211 546 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms