RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 CDR2LQ86X02 465 aaPredicted RBP12.34□□□□□ -0.43
RAB5C-208ENST00000551338 THNSL1Q8IYQ7 743 aa12.34□□□□□ -0.43
RAB5C-208ENST00000551338 RBBP8NLQ8NC74 664 aaPredicted RBP12.34□□□□□ -0.43
RAB5C-208ENST00000551338 AENQ8WTP8 325 aaKnown RBP12.34□□□□□ -0.43
RAB5C-208ENST00000551338 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.34□□□□□ -0.43
RAB5C-208ENST00000551338 FDXACB1Q9BRP7 624 aaPredicted RBP12.34□□□□□ -0.43
RAB5C-208ENST00000551338 MTMR12Q9C0I1 747 aa12.34□□□□□ -0.43
RAB5C-208ENST00000551338 ABHD16BQ9H3Z7 469 aa12.34□□□□□ -0.43
RAB5C-208ENST00000551338 IFT122Q9HBG6 1241 aa12.34□□□□□ -0.43
RAB5C-208ENST00000551338 NMRK2Q9NPI5 230 aa12.34□□□□□ -0.43
RAB5C-208ENST00000551338 ST7Q9NRC1 585 aa12.34□□□□□ -0.43
RAB5C-208ENST00000551338 CPA4Q9UI42 421 aa12.34□□□□□ -0.43
RAB5C-208ENST00000551338 PCDHB4Q9Y5E5 795 aa12.34□□□□□ -0.43
RAB5C-208ENST00000551338 TMEM110-MUSTN1A8MSY1 372 aa12.33□□□□□ -0.44
RAB5C-208ENST00000551338 GPR25O00155 361 aa12.33□□□□□ -0.44
RAB5C-208ENST00000551338 IGF2BP3O00425 579 aaKnown RBP eCLIP12.33□□□□□ -0.44
RAB5C-208ENST00000551338 MEFVO15553 781 aaPredicted RBP12.33□□□□□ -0.44
RAB5C-208ENST00000551338 PPFIA4O75335 1185 aa12.33□□□□□ -0.44
RAB5C-208ENST00000551338 ITGBL1O95965 494 aaPredicted RBP12.33□□□□□ -0.44
RAB5C-208ENST00000551338 CST3P01034 146 aaPredicted RBP12.33□□□□□ -0.44
RAB5C-208ENST00000551338 ZNF132P52740 706 aa12.33□□□□□ -0.44
RAB5C-208ENST00000551338 HUNKP57058 714 aa12.33□□□□□ -0.44
RAB5C-208ENST00000551338 BPIFB4P59827 614 aa12.33□□□□□ -0.44
RAB5C-208ENST00000551338 MYL6P60660 151 aa12.33□□□□□ -0.44
RAB5C-208ENST00000551338 CASP8Q14790 479 aa12.33□□□□□ -0.44
RAB5C-208ENST00000551338 GRIK4Q16099 956 aa12.33□□□□□ -0.44
RAB5C-208ENST00000551338 IQSEC1Q6DN90 963 aa12.33□□□□□ -0.44
RAB5C-208ENST00000551338 CPNE8Q86YQ8 564 aa12.33□□□□□ -0.44
RAB5C-208ENST00000551338 TMEM192Q8IY95 271 aa12.33□□□□□ -0.44
RAB5C-208ENST00000551338 ZNF564Q8TBZ8 553 aaPredicted RBP12.33□□□□□ -0.44
RAB5C-208ENST00000551338 PPP1R16BQ96T49 567 aa12.33□□□□□ -0.44
RAB5C-208ENST00000551338 KRT12Q99456 494 aa12.33□□□□□ -0.44
RAB5C-208ENST00000551338 NUP85Q9BW27 656 aa12.33□□□□□ -0.44
RAB5C-208ENST00000551338 STIM2Q9P246 746 aa12.33□□□□□ -0.44
RAB5C-208ENST00000551338 CNOT8Q9UFF9 292 aaKnown RBP12.33□□□□□ -0.44
RAB5C-208ENST00000551338 CHORDC1Q9UHD1 332 aaPredicted RBP12.33□□□□□ -0.44
RAB5C-208ENST00000551338 TTC7AQ9ULT0 858 aaPredicted RBP12.33□□□□□ -0.44
RAB5C-208ENST00000551338 PCDHB2Q9Y5E7 798 aa12.33□□□□□ -0.44
RAB5C-208ENST00000551338 ALG6Q9Y672 507 aa12.33□□□□□ -0.44
RAB5C-208ENST00000551338 SCN1AP35498 2009 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 BHMG1C9JSJ3 638 aaPredicted RBP12.32□□□□□ -0.44
RAB5C-208ENST00000551338 H3BRB1 525 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 CCDC188H7C350 402 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 RAD51CO43502 376 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 B4GALT4O60513 344 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 HEXIM1O94992 359 aaKnown RBP12.32□□□□□ -0.44
RAB5C-208ENST00000551338 VTNP04004 478 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 CFHP08603 1231 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 TMEM191BP0C7N4 346 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 MCF2P10911 925 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 CTNNA2P26232 953 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 OAS2P29728 719 aaKnown RBP12.32□□□□□ -0.44
RAB5C-208ENST00000551338 MARCKSL1P49006 195 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 NOMO3P69849 1222 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 CENPCQ03188 943 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 PPFIA1Q13136 1202 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 MAP2K5Q13163 448 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 MESDQ14696 234 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 MARCH8Q5T0T0 291 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 TMEM270Q6UE05 265 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 MCOLN2Q8IZK6 566 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 ALG3Q92685 438 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 CD101Q93033 1021 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 FAM212AQ96EL1 285 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 RPS6KC1Q96S38 1066 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 IMPG2Q9BZV3 1241 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 CARD9Q9H257 536 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 PDZD7Q9H5P4 517 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 TUT1Q9H6E5 874 aaKnown RBP12.32□□□□□ -0.44
RAB5C-208ENST00000551338 AVENQ9NQS1 362 aaPredicted RBP12.32□□□□□ -0.44
RAB5C-208ENST00000551338 GDF3Q9NR23 364 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 UVRAGQ9P2Y5 699 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 AKT3Q9Y243 479 aa12.32□□□□□ -0.44
RAB5C-208ENST00000551338 ZSCAN5CA6NGD5 496 aaPredicted RBP12.31□□□□□ -0.44
RAB5C-208ENST00000551338 MANSC4A6NHS7 340 aaPredicted RBP12.31□□□□□ -0.44
RAB5C-208ENST00000551338 MIF4GDA9UHW6 222 aaKnown RBP12.31□□□□□ -0.44
RAB5C-208ENST00000551338 H3BQF6 201 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 CSDE1O75534 798 aaKnown RBP12.31□□□□□ -0.44
RAB5C-208ENST00000551338 IL18RAPO95256 599 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 GLI1P08151 1106 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 CXCL8P10145 99 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 ITGA4P13612 1032 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 ARF4P18085 180 aaPredicted RBP12.31□□□□□ -0.44
RAB5C-208ENST00000551338 COMTP21964 271 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 GNA15P30679 374 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 OSTNP61366 133 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 TFAMQ00059 246 aaKnown RBP12.31□□□□□ -0.44
RAB5C-208ENST00000551338 TNFAIP2Q03169 654 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 IRF5Q13568 498 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 TAF1CQ15572 869 aaPredicted RBP12.31□□□□□ -0.44
RAB5C-208ENST00000551338 DUOXA2Q1HG44 320 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 TMEM132AQ24JP5 1023 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 NAA35Q5VZE5 725 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 TRIM72Q6ZMU5 477 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 MON1BQ7L1V2 547 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 KLHL7Q8IXQ5 586 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 KRT35Q92764 455 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 ANKRD36BP1Q96IX9 119 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 CPB2Q96IY4 423 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 BTBD6Q96KE9 485 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms