RNA–Protein interactions for RNA: ENST00000550919.5

CERS5-223, Transcript of ceramide synthase 5, human

TSL 3

Gene CERS5, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CERS5-223	ENST00000550919	SLC38A7	Q9NVC3	462 aa		14.16	□□□□□ -0.14
CERS5-223	ENST00000550919	DNAJB4	Q9UDY4	337 aa		14.16	□□□□□ -0.14
CERS5-223	ENST00000550919	C2CD2	Q9Y426	696 aa		14.16	□□□□□ -0.14
CERS5-223	ENST00000550919	LRRC10B	A6NIK2	292 aa		14.15	□□□□□ -0.14
CERS5-223	ENST00000550919	TH	P07101	528 aa		14.15	□□□□□ -0.14
CERS5-223	ENST00000550919	CA3	P07451	260 aa		14.15	□□□□□ -0.14
CERS5-223	ENST00000550919	TPM2	P07951	284 aa		14.15	□□□□□ -0.14
CERS5-223	ENST00000550919	TNNI1	P19237	187 aa		14.15	□□□□□ -0.14
CERS5-223	ENST00000550919	CYP3A5	P20815	502 aa		14.15	□□□□□ -0.14
CERS5-223	ENST00000550919	GUCY2F	P51841	1108 aa		14.15	□□□□□ -0.14
CERS5-223	ENST00000550919	SMAD3	P84022	425 aa	Known RBP	14.15	□□□□□ -0.14
CERS5-223	ENST00000550919	TUSC3	Q13454	348 aa		14.15	□□□□□ -0.14
CERS5-223	ENST00000550919	TMEM132D	Q14C87	1099 aa		14.15	□□□□□ -0.14
CERS5-223	ENST00000550919	DUOXA2	Q1HG44	320 aa		14.15	□□□□□ -0.14
CERS5-223	ENST00000550919	TCP11X2	Q5H9J9	407 aa		14.15	□□□□□ -0.14
CERS5-223	ENST00000550919	LMBRD2	Q68DH5	695 aa	Predicted RBP	14.15	□□□□□ -0.14
CERS5-223	ENST00000550919	C15orf39	Q6ZRI6	1047 aa		14.15	□□□□□ -0.14
CERS5-223	ENST00000550919	GAS2L3	Q86XJ1	694 aa		14.15	□□□□□ -0.14
CERS5-223	ENST00000550919	WDR49	Q8IV35	697 aa		14.15	□□□□□ -0.14
CERS5-223	ENST00000550919	TRIM59	Q8IWR1	403 aa		14.15	□□□□□ -0.14
CERS5-223	ENST00000550919	KIF12	Q96FN5	646 aa		14.15	□□□□□ -0.14
CERS5-223	ENST00000550919	PAAF1	Q9BRP4	392 aa		14.15	□□□□□ -0.14
CERS5-223	ENST00000550919		F8W810	466 aa		14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	TULP1	O00294	542 aa	Predicted RBP	14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	TRIM49	P0CI25	452 aa		14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	TRIM49C	P0CI26	452 aa		14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	DLAT	P10515	647 aa	Known RBP	14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	IGFBP6	P24592	240 aa	Predicted RBP	14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	PBX3	P40426	434 aa		14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	MTIF2	P46199	727 aa	Known RBP	14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	SLC11A1	P49279	550 aa		14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	TAP1	Q03518	808 aa		14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	PPP3CA	Q08209	521 aa		14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	CD300LG	Q6UXG3	332 aa		14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	TMEM173	Q86WV6	379 aa	Predicted RBP	14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	C3orf58	Q8NDZ4	430 aa		14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	BEST2	Q8NFU1	509 aa		14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	BCL7C	Q8WUZ0	217 aa	Predicted RBP	14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	SLC35C1	Q96A29	364 aa		14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	ANKRD36BP1	Q96IX9	119 aa		14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	MTMR12	Q9C0I1	747 aa		14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	RBSN	Q9H1K0	784 aa		14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	NKX2-4	Q9H2Z4	354 aa		14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	INTS13	Q9NVM9	706 aa		14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	MARCH5	Q9NX47	278 aa		14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	LIMA1	Q9UHB6	759 aa	Known RBP	14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	UBQLN1	Q9UMX0	589 aa	Known RBP	14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	14.14	□□□□□ -0.15
CERS5-223	ENST00000550919	CARNS1	A5YM72	827 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	CASTOR2	A6NHX0	329 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	SOX1	O00570	391 aa	Predicted RBP	14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	PPEF2	O14830	753 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	PMM2	O15305	246 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	EFEMP2	O95967	443 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	TNNC2	P02585	160 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	TMEM191B	P0C7N4	346 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	DNAJB2	P25686	324 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	LRPAP1	P30533	357 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	BCAR1	P56945	870 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	RAB30	Q15771	203 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	MAN2A1	Q16706	1144 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	UPP1	Q16831	310 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	TCERG1L	Q5VWI1	586 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	FIBCD1	Q8N539	461 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	C1orf127	Q8N9H9	656 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	COLGALT1	Q8NBJ5	622 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	RNF214	Q8ND24	703 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	RABGGTA	Q92696	567 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	DDX27	Q96GQ7	796 aa	Known RBP	14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	FAM193B	Q96PV7	902 aa	Predicted RBP	14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	TMEM175	Q9BSA9	504 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	TUBGCP2	Q9BSJ2	902 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	C17orf80	Q9BSJ5	609 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	SIX4	Q9UIU6	781 aa		14.13	□□□□□ -0.15
CERS5-223	ENST00000550919	ANO9	A1A5B4	782 aa		14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	P4HA2	O15460	535 aa		14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	N4BP1	O75113	896 aa	Known RBP	14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	ZC3H11A	O75152	810 aa	Known RBP eCLIP	14.12	□□□□□ -0.15	3e-10	■■■■□ 19.7
CERS5-223	ENST00000550919	AFP	P02771	609 aa	Known RBP	14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	C4BPA	P04003	597 aa	Known RBP	14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	ITGB1	P05556	798 aa		14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	GALT	P07902	379 aa		14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	LAG3	P18627	525 aa		14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	RPL9	P32969	192 aa	Known RBP	14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	CLCNKB	P51801	687 aa		14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	TFAM	Q00059	246 aa	Known RBP	14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	RNASEL	Q05823	741 aa	Known RBP	14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	CETN1	Q12798	172 aa		14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	KCNH2	Q12809	1159 aa		14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	UVSSA	Q2YD98	709 aa		14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	VWA3B	Q502W6	1294 aa		14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	HSP90AA4P	Q58FG1	418 aa		14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	DCAF17	Q5H9S7	520 aa	Predicted RBP	14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	TDRD10	Q5VZ19	366 aa	Known RBP	14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	KRT39	Q6A163	491 aa		14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	UROC1	Q96N76	676 aa		14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	TMEM8A	Q9HCN3	771 aa		14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	DPP3	Q9NY33	737 aa		14.12	□□□□□ -0.15
CERS5-223	ENST00000550919	TRANK1	O15050	2925 aa		14.11	□□□□□ -0.15
CERS5-223	ENST00000550919	C5orf67	F2Z3F1	127 aa		14.11	□□□□□ -0.15

Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms