RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 ARL8AQ96BM9 186 aa13.15□□□□□ -0.3
RAB3IP-212ENST00000550536 MUC3BQ9H195 1237 aa13.15□□□□□ -0.3
RAB3IP-212ENST00000550536 SMG5Q9UPR3 1016 aaKnown RBP13.15□□□□□ -0.3
RAB3IP-212ENST00000550536 MTHFD1LQ6UB35 978 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 PARP9Q8IXQ6 854 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 SP8Q8IXZ3 490 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 UNC45AQ9H3U1 944 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 STAG2Q8N3U4 1231 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 ZNF507Q8TCN5 953 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 ARHGEF26Q96DR7 871 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 CLMNQ96JQ2 1002 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 EHD2Q9NZN4 543 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 TBC1D4O60343 1298 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 TERF2Q15554 542 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 PTPRN2Q92932 1015 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 PPP2R3CQ969Q6 453 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 ZFYVE19Q96K21 471 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 LSM7Q9UK45 103 aaKnown RBP13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 PDS5AQ29RF7 1337 aaKnown RBP13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 CHUKO15111 745 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 TADA2AO75478 443 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 TJAP1Q5JTD0 557 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 HNRNPRO43390 633 aaKnown RBP13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 TDP2O95551 362 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 SNX17Q15036 470 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 UGP2Q16851 508 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 WDR72Q3MJ13 1102 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 SLC35G2Q8TBE7 412 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 PPCSQ9HAB8 311 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 ZNF556Q9HAH1 456 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 PHF2O75151 1096 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 PRKCBP05771 671 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 SERPINB4P48594 390 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 EPHA10Q5JZY3 1008 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 PKN3Q6P5Z2 889 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 GLYCTKQ8IVS8 523 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 H0Y626 953 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 TRIM16O95361 564 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 E2F4Q16254 413 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 SNRNP35Q16560 246 aaKnown RBP13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 TRABDQ9H4I3 376 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 TRAF3IP3Q9Y228 551 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 FMN2Q9NZ56 1722 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 NPHP3-ACAD11A0A0J9YXS1 232 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 GSG1L2A8MUP6 293 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 DGAT1O75907 488 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 SCP2P22307 547 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 GYS2P54840 703 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 RBP5P82980 135 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 NCOA4Q13772 614 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 SMAD1Q15797 465 aaKnown RBP13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 COG1Q8WTW3 980 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 ADNPQ9H2P0 1102 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 FBXL5Q9UKA1 691 aa13.14□□□□□ -0.31
RAB3IP-212ENST00000550536 TNPO2O14787 897 aaKnown RBP13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 MEFVO15553 781 aaPredicted RBP13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 SMARCAD1Q9H4L7 1026 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 FAM32AQ9Y421 112 aaKnown RBP13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 ARHGEF28Q8N1W1 1705 aaKnown RBP13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 PP2D1A8MPX8 630 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 CYP26A1O43174 497 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 CDH2P19022 906 aaPredicted RBP13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 STILQ15468 1287 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 CYP27B1O15528 508 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 STAT5BP51692 787 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 KDELC2Q7Z4H8 507 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 KRT35Q92764 455 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 NSMCE4AQ9NXX6 385 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 WDR35Q9P2L0 1181 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 ZNF263O14978 683 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 ATP1A1P05023 1023 aaKnown RBP13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 MYL2P10916 166 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 PKD2L2Q9NZM6 624 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 RNF181Q9P0P0 153 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 AKT1P31749 480 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 FMO5P49326 533 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 NLRP11P59045 1033 aaKnown RBP13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 ACTR2P61160 394 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 KBTBD13C9JR72 458 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 CD4P01730 458 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 LDHDQ86WU2 507 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 CELF1Q92879 486 aaKnown RBP13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 EPN3Q9H201 632 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 NPHS2Q9NP85 383 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 PSMC3IPQ9P2W1 217 aaPredicted RBP13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 ZC3H7BQ9UGR2 993 aaKnown RBP13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 KLHL11Q9NVR0 708 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 ARHGEF38Q9NXL2 777 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 IGSF9BQ9UPX0 1349 aa13.13□□□□□ -0.31
RAB3IP-212ENST00000550536 ATP9BO43861 1147 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 HMGCS2P54868 508 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 C16orf89Q6UX73 402 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 PID1Q7Z2X4 250 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 CPA5Q8WXQ8 436 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 SRPK1Q96SB4 655 aaKnown RBP13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 ADGRG1Q9Y653 693 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 FLT1P17948 1338 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 PRRG1O14668 218 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 NDUFS3O75489 264 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms