RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	AGMO	Q6ZNB7	445 aa		12.53	□□□□□ -0.4
CNOT2-223	ENST00000550160	C15orf39	Q6ZRI6	1047 aa		12.53	□□□□□ -0.4
CNOT2-223	ENST00000550160	TRAPPC11	Q7Z392	1133 aa		12.53	□□□□□ -0.4
CNOT2-223	ENST00000550160	CACNA2D4	Q7Z3S7	1137 aa		12.53	□□□□□ -0.4
CNOT2-223	ENST00000550160	ZNF598	Q86UK7	904 aa	Known RBP	12.53	□□□□□ -0.4
CNOT2-223	ENST00000550160	RTN4RL1	Q86UN2	441 aa	Predicted RBP	12.53	□□□□□ -0.4
CNOT2-223	ENST00000550160	CNGA4	Q8IV77	575 aa		12.53	□□□□□ -0.4
CNOT2-223	ENST00000550160	FMNL3	Q8IVF7	1028 aa		12.53	□□□□□ -0.4
CNOT2-223	ENST00000550160	TNS4	Q8IZW8	715 aa		12.53	□□□□□ -0.4
CNOT2-223	ENST00000550160	EHBP1	Q8NDI1	1231 aa		12.53	□□□□□ -0.4
CNOT2-223	ENST00000550160	OR5B17	Q8NGF7	314 aa		12.53	□□□□□ -0.4
CNOT2-223	ENST00000550160	URGCP	Q8TCY9	931 aa		12.53	□□□□□ -0.4
CNOT2-223	ENST00000550160	TAS1R2	Q8TE23	839 aa		12.53	□□□□□ -0.4
CNOT2-223	ENST00000550160	ZNF516	Q92618	1163 aa		12.53	□□□□□ -0.4
CNOT2-223	ENST00000550160	NT5C1B	Q96P26	610 aa		12.53	□□□□□ -0.4
CNOT2-223	ENST00000550160	PPP1R9B	Q96SB3	815 aa		12.53	□□□□□ -0.4
CNOT2-223	ENST00000550160	EDEM3	Q9BZQ6	932 aa		12.53	□□□□□ -0.4
CNOT2-223	ENST00000550160	CEP72	Q9P209	647 aa		12.53	□□□□□ -0.4
CNOT2-223	ENST00000550160	KANSL3	Q9P2N6	904 aa		12.53	□□□□□ -0.4
CNOT2-223	ENST00000550160	PTPRJ	Q12913	1337 aa		12.53	□□□□□ -0.4
CNOT2-223	ENST00000550160	ARL5C	A6NH57	179 aa		12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	NRDC	O43847	1150 aa		12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	BAIAP3	O94812	1187 aa		12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	ATF7	P17544	494 aa	Predicted RBP	12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	SLC9A1	P19634	815 aa		12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	CYP3A5	P20815	502 aa		12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	ATIC	P31939	592 aa		12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	RBP5	P82980	135 aa		12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	KCNMA1	Q12791	1236 aa		12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	GRIK3	Q13003	919 aa		12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	SGSM1	Q2NKQ1	1148 aa		12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	GLRA4	Q5JXX5	417 aa		12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	NPAS4	Q8IUM7	802 aa		12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	LINC01599	Q8WXQ3	324 aa		12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	TAF4B	Q92750	862 aa		12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	DPF3	Q92784	378 aa		12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	LPP	Q93052	612 aa		12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	GAD1	Q99259	594 aa		12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	LBHD1	Q9BQE6	289 aa	Predicted RBP	12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	NUCKS1	Q9H1E3	243 aa	Known RBP	12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	IL23A	Q9NPF7	189 aa		12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	DPP3	Q9NY33	737 aa		12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	APEX2	Q9UBZ4	518 aa		12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	FBXL5	Q9UKA1	691 aa		12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	LUC7L2	Q9Y383	392 aa	Known RBP	12.52	□□□□□ -0.41
CNOT2-223	ENST00000550160	CIT	O14578	2027 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160		A0A1W2PQJ5	194 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	C19orf67	A6NJJ6	358 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	AKR1B15	C9JRZ8	316 aa	Predicted RBP	12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	MEFV	O15553	781 aa	Predicted RBP	12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	AMH	P03971	560 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	ITGB3	P05106	788 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	P4HA1	P13674	534 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	UCHL3	P15374	230 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	TBXAS1	P24557	533 aa	Predicted RBP	12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	PNPLA4	P41247	253 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	KCNJ6	P48051	423 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	MFAP3	P55082	362 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	POLR2F	P61218	127 aa	Known RBP	12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	NOP14	P78316	857 aa	Known RBP	12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	ZBED6	P86452	979 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	MYO1E	Q12965	1108 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	PTPN21	Q16825	1174 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	ZNF699	Q32M78	642 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	KLHDC7A	Q5VTJ3	777 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	PSRC1	Q6PGN9	363 aa	Predicted RBP	12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	ENOSF1	Q7L5Y1	443 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	C1orf127	Q8N9H9	656 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	CPLX3	Q8WVH0	158 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	ZFP42	Q96MM3	310 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	ZNF560	Q96MR9	790 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	ZMAT2	Q96NC0	199 aa	Known RBP	12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	SPAG5	Q96R06	1193 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	MRPL9	Q9BYD2	267 aa	Known RBP	12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	CAPN11	Q9UMQ6	739 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	INPP5F	Q9Y2H2	1132 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	NR2E3	Q9Y5X4	410 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	RALGAPA2	Q2PPJ7	1873 aa		12.51	□□□□□ -0.41
CNOT2-223	ENST00000550160	PTGES	O14684	152 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	INPPL1	O15357	1258 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	MFAP3L	O75121	409 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	VNN1	O95497	513 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	GYPC	P04921	128 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	ITGB8	P26012	769 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	POLR2B	P30876	1174 aa	Known RBP	12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	CASP14	P31944	242 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	KLK7	P49862	253 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	SCNN1G	P51170	649 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	RNASEL	Q05823	741 aa	Known RBP	12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	LRMP	Q12912	555 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	TBX2	Q13207	712 aa	Predicted RBP	12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	RAPGEF1	Q13905	1077 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	ZBTB6	Q15916	424 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	NOMO2	Q5JPE7	1267 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	PPM1K	Q8N3J5	372 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	LRRC52	Q8N7C0	313 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	LMO3	Q8TAP4	145 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	SEMA4D	Q92854	862 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	BAD	Q92934	168 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	DDX27	Q96GQ7	796 aa	Known RBP	12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms