RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 TMEM206Q9H813 350 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 YY1AP1Q9H869 796 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 C17orf75Q9HAS0 396 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 ABCF3Q9NUQ8 709 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 WDR91A4D1P6 747 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 GBP2P32456 591 aaPredicted RBP11.85□□□□□ -0.51
LINC00661-204ENST00000549354 PSMC2P35998 433 aaKnown RBP11.85□□□□□ -0.51
LINC00661-204ENST00000549354 CNTN2Q02246 1040 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 MTMR3Q13615 1198 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 CDR2LQ86X02 465 aaPredicted RBP11.85□□□□□ -0.51
LINC00661-204ENST00000549354 SPATS2Q86XZ4 545 aaKnown RBP11.85□□□□□ -0.51
LINC00661-204ENST00000549354 CBWD2Q8IUF1 395 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 CCDC197Q8NCU1 140 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 ATP8B4Q8TF62 1192 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 PRCCQ92733 491 aaPredicted RBP11.85□□□□□ -0.51
LINC00661-204ENST00000549354 TATDN2Q93075 761 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 RBPJLQ9UBG7 517 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 DNAJC25-GNG10A0A024R161 153 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 GOLGA6L10A0A0M3HER8 536 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 O00370 1275 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 IFNB1P01574 187 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 DRD4P21917 467 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 COMTP21964 271 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 ACTR2P61160 394 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 PLCB3Q01970 1234 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 SP2Q02086 613 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 LRIG3Q6UXM1 1119 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 EEPD1Q7L9B9 569 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 ANKRD35Q8N283 1001 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 OPTNQ96CV9 577 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 C9orf72Q96LT7 481 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 ERP44Q9BS26 406 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 ALG13Q9NP73 1137 aaKnown RBP11.84□□□□□ -0.51
LINC00661-204ENST00000549354 CCDC188H7C350 402 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 MAPK13O15264 365 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 GRIN3BO60391 1043 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 SOX5P35711 763 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 RPL21P46778 160 aaKnown RBP11.84□□□□□ -0.51
LINC00661-204ENST00000549354 PPP3CAQ08209 521 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 MYO1EQ12965 1108 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 SPOPLQ6IQ16 392 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 MORC4Q8TE76 937 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 ZNF653Q96CK0 615 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 SGSM3Q96HU1 749 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 SUCLA2Q9P2R7 463 aaPredicted RBP11.84□□□□□ -0.51
LINC00661-204ENST00000549354 SUFUQ9UMX1 484 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 CEP83Q9Y592 693 aa11.84□□□□□ -0.51
LINC00661-204ENST00000549354 MAFBQ9Y5Q3 323 aaPredicted RBP11.84□□□□□ -0.51
LINC00661-204ENST00000549354 BZW2Q9Y6E2 419 aaKnown RBP11.84□□□□□ -0.51
LINC00661-204ENST00000549354 SUPT20HL2P0C7V6 817 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 TGFB3P10600 412 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 GJA5P36382 358 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 CLNS1AP54105 237 aaKnown RBP11.83□□□□□ -0.52
LINC00661-204ENST00000549354 FSTL1Q12841 308 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 PPP2R5AQ15172 486 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 MIS18BP1Q6P0N0 1132 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 SYCE1Q8N0S2 351 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 LRRN4Q8WUT4 740 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 STAMBPL1Q96FJ0 436 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 ACCSQ96QU6 501 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 FAM114A2Q9NRY5 505 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 GABBR1Q9UBS5 961 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 TRIM33Q9UPN9 1127 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 SYNGAP1Q96PV0 1343 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 A8MUI8 341 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 NEDD9Q14511 834 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 XKR9Q5GH70 373 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 ZDHHC14Q8IZN3 488 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 SHCBP1Q8NEM2 672 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 RFFLQ8WZ73 363 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 HES6Q96HZ4 224 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 FGD4Q96M96 766 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 SLC24A3Q9HC58 644 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 FGFR1OP2Q9NVK5 253 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 SAMD15Q9P1V8 674 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 SLC45A1Q9Y2W3 748 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 PIK3R2O00459 728 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 SOCS7O14512 581 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 SPAG7O75391 227 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 PYGMP11217 842 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 OSBPP22059 807 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 OSTNP61366 133 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 DYNLT1P63172 113 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 KCNJ2P63252 427 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 TTC27Q6P3X3 843 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 GSTA5Q7RTV2 222 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 CCDC60Q8IWA6 550 aaPredicted RBP11.83□□□□□ -0.52
LINC00661-204ENST00000549354 TMEM130Q8N3G9 435 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 CCDC63Q8NA47 563 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 KCNV2Q8TDN2 545 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 GTF3C2Q8WUA4 911 aaPredicted RBP11.83□□□□□ -0.52
LINC00661-204ENST00000549354 KIFAP3Q92845 792 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 RAB17Q9H0T7 212 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 TXNRD2Q9NNW7 524 aa11.83□□□□□ -0.52
LINC00661-204ENST00000549354 DOCK5Q9H7D0 1870 aa11.82□□□□□ -0.52
LINC00661-204ENST00000549354 EZRP15311 586 aaKnown RBP11.82□□□□□ -0.52
LINC00661-204ENST00000549354 BRD2P25440 801 aaKnown RBP11.82□□□□□ -0.52
LINC00661-204ENST00000549354 KYNUQ16719 465 aa11.82□□□□□ -0.52
LINC00661-204ENST00000549354 SWSAP1Q6NVH7 229 aa11.82□□□□□ -0.52
LINC00661-204ENST00000549354 CCDC137Q6PK04 289 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms