RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 RRAGBQ5VZM2 374 aa20.34■□□□□ 0.85
CHMP1A-207ENST00000549328 SUGP1Q8IWZ8 645 aaKnown RBP20.34■□□□□ 0.85
CHMP1A-207ENST00000549328 C18orf25Q96B23 403 aaPredicted RBP20.34■□□□□ 0.85
CHMP1A-207ENST00000549328 CLIC6Q96NY7 704 aa20.34■□□□□ 0.85
CHMP1A-207ENST00000549328 TSPAN18Q96SJ8 248 aa20.34■□□□□ 0.85
CHMP1A-207ENST00000549328 ZHX3Q9H4I2 956 aa20.34■□□□□ 0.85
CHMP1A-207ENST00000549328 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.34■□□□□ 0.85
CHMP1A-207ENST00000549328 IGSF9Q9P2J2 1179 aa20.34■□□□□ 0.85
CHMP1A-207ENST00000549328 NUB1Q9Y5A7 615 aa20.34■□□□□ 0.85
CHMP1A-207ENST00000549328 MUC6Q6W4X9 2439 aa20.34■□□□□ 0.85
CHMP1A-207ENST00000549328 A0A0B4J269 797 aa20.33■□□□□ 0.85
CHMP1A-207ENST00000549328 OGTO15294 1046 aa20.33■□□□□ 0.85
CHMP1A-207ENST00000549328 CXCL8P10145 99 aa20.33■□□□□ 0.85
CHMP1A-207ENST00000549328 NASPP49321 788 aaPredicted RBP20.33■□□□□ 0.85
CHMP1A-207ENST00000549328 ZBTB6Q15916 424 aa20.33■□□□□ 0.85
CHMP1A-207ENST00000549328 MAP4K3Q8IVH8 894 aa20.33■□□□□ 0.85
CHMP1A-207ENST00000549328 ZDBF2Q9HCK1 2354 aa20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 I3L4J1 428 aa20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 FAM189A1O60320 539 aa20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 N4BP1O75113 896 aaKnown RBP20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 C8AP07357 584 aa20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 ADRB2P07550 413 aa20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 POU2F2P09086 479 aa20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 CYP3A5P20815 502 aa20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 NMT1P30419 496 aaKnown RBP20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 GBP2P32456 591 aaPredicted RBP20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 TDGQ13569 410 aa20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 PPM1LQ5SGD2 360 aa20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 AXDND1Q5T1B0 1012 aaPredicted RBP20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 SLC8B1Q6J4K2 584 aa20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 RSPO2Q6UXX9 243 aaPredicted RBP20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 CCDC73Q6ZRK6 1079 aa20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 SV2BQ7L1I2 683 aa20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 DDX12PQ92771 950 aa20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 SUSD3Q96L08 255 aa20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 KCNK12Q9HB15 430 aa20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 EPS15L1Q9UBC2 864 aa20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 SEL1LQ9UBV2 794 aa20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 CDY1Q9Y6F8 540 aa20.32■□□□□ 0.84
CHMP1A-207ENST00000549328 LRPAP1P30533 357 aa20.31■□□□□ 0.84
CHMP1A-207ENST00000549328 PPP2R3AQ06190 1150 aa20.31■□□□□ 0.84
CHMP1A-207ENST00000549328 MRPL58Q14197 206 aaKnown RBP20.31■□□□□ 0.84
CHMP1A-207ENST00000549328 VARS2Q5ST30 1063 aaKnown RBP20.31■□□□□ 0.84
CHMP1A-207ENST00000549328 DYMQ7RTS9 669 aa20.31■□□□□ 0.84
CHMP1A-207ENST00000549328 ZNF720Q7Z2F6 126 aa20.31■□□□□ 0.84
CHMP1A-207ENST00000549328 CD302Q8IX05 232 aa20.31■□□□□ 0.84
CHMP1A-207ENST00000549328 NXPE3Q969Y0 559 aa20.31■□□□□ 0.84
CHMP1A-207ENST00000549328 HVCN1Q96D96 273 aa20.31■□□□□ 0.84
CHMP1A-207ENST00000549328 PRRX2Q99811 253 aa20.31■□□□□ 0.84
CHMP1A-207ENST00000549328 MSTO1Q9BUK6 570 aa20.31■□□□□ 0.84
CHMP1A-207ENST00000549328 RPF1Q9H9Y2 349 aaKnown RBP20.31■□□□□ 0.84
CHMP1A-207ENST00000549328 UBQLN1Q9UMX0 589 aaKnown RBP20.31■□□□□ 0.84
CHMP1A-207ENST00000549328 ZFP37Q9Y6Q3 630 aaPredicted RBP20.31■□□□□ 0.84
CHMP1A-207ENST00000549328 H7C4K7 107 aa20.3■□□□□ 0.84
CHMP1A-207ENST00000549328 XPOTO43592 962 aaKnown RBP20.3■□□□□ 0.84
CHMP1A-207ENST00000549328 TBC1D4O60343 1298 aa20.3■□□□□ 0.84
CHMP1A-207ENST00000549328 XYLBO75191 536 aa20.3■□□□□ 0.84
CHMP1A-207ENST00000549328 GAP43P17677 238 aa20.3■□□□□ 0.84
CHMP1A-207ENST00000549328 TNFSF9P41273 254 aa20.3■□□□□ 0.84
CHMP1A-207ENST00000549328 ENOX2Q16206 610 aaKnown RBP20.3■□□□□ 0.84
CHMP1A-207ENST00000549328 ZC2HC1CQ53FD0 456 aaPredicted RBP20.3■□□□□ 0.84
CHMP1A-207ENST00000549328 SLFN12LQ6IEE8 588 aa20.3■□□□□ 0.84
CHMP1A-207ENST00000549328 SLC39A4Q6P5W5 647 aa20.3■□□□□ 0.84
CHMP1A-207ENST00000549328 LINC00301Q8NCQ3 95 aa20.3■□□□□ 0.84
CHMP1A-207ENST00000549328 ZNF461Q8TAF7 563 aa20.3■□□□□ 0.84
CHMP1A-207ENST00000549328 SLC7A14Q8TBB6 771 aa20.3■□□□□ 0.84
CHMP1A-207ENST00000549328 DNAJC19Q96DA6 116 aa20.3■□□□□ 0.84
CHMP1A-207ENST00000549328 KIF12Q96FN5 646 aa20.3■□□□□ 0.84
CHMP1A-207ENST00000549328 MYADMQ96S97 322 aa20.3■□□□□ 0.84
CHMP1A-207ENST00000549328 STYXL1Q9Y6J8 313 aa20.3■□□□□ 0.84
CHMP1A-207ENST00000549328 PDCD11Q14690 1871 aaKnown RBP20.3■□□□□ 0.84
CHMP1A-207ENST00000549328 MYMKA6NI61 221 aa20.29■□□□□ 0.84
CHMP1A-207ENST00000549328 LACTBL1A8MY62 500 aa20.29■□□□□ 0.84
CHMP1A-207ENST00000549328 ABLIM3O94929 683 aa20.29■□□□□ 0.84
CHMP1A-207ENST00000549328 LAMP2P13473 410 aa20.29■□□□□ 0.84
CHMP1A-207ENST00000549328 MCM4P33991 863 aa20.29■□□□□ 0.84
CHMP1A-207ENST00000549328 POU5F1Q01860 360 aaKnown RBP20.29■□□□□ 0.84
CHMP1A-207ENST00000549328 STK38Q15208 465 aa20.29■□□□□ 0.84
CHMP1A-207ENST00000549328 SFR1Q86XK3 245 aa20.29■□□□□ 0.84
CHMP1A-207ENST00000549328 HSCBQ8IWL3 235 aa20.29■□□□□ 0.84
CHMP1A-207ENST00000549328 APPL2Q8NEU8 664 aa20.29■□□□□ 0.84
CHMP1A-207ENST00000549328 ZNF396Q96N95 335 aaPredicted RBP20.29■□□□□ 0.84
CHMP1A-207ENST00000549328 SMOC2Q9H3U7 446 aa20.29■□□□□ 0.84
CHMP1A-207ENST00000549328 TUBGCP4Q9UGJ1 667 aa20.29■□□□□ 0.84
CHMP1A-207ENST00000549328 CPSF3Q9UKF6 684 aaKnown RBP20.29■□□□□ 0.84
CHMP1A-207ENST00000549328 DOCK8Q8NF50 2099 aa20.28■□□□□ 0.84
CHMP1A-207ENST00000549328 PPP6R2O75170 966 aa20.28■□□□□ 0.84
CHMP1A-207ENST00000549328 PPP1R37O75864 691 aa20.28■□□□□ 0.84
CHMP1A-207ENST00000549328 FSHRP23945 695 aa20.28■□□□□ 0.84
CHMP1A-207ENST00000549328 AVPR2P30518 371 aa20.28■□□□□ 0.84
CHMP1A-207ENST00000549328 STAT6P42226 847 aa20.28■□□□□ 0.84
CHMP1A-207ENST00000549328 ROR1Q01973 937 aa20.28■□□□□ 0.84
CHMP1A-207ENST00000549328 ZBTB41Q5SVQ8 909 aa20.28■□□□□ 0.84
CHMP1A-207ENST00000549328 GRASPQ7Z6J2 395 aaPredicted RBP20.28■□□□□ 0.84
CHMP1A-207ENST00000549328 STRA6Q9BX79 667 aa20.28■□□□□ 0.84
CHMP1A-207ENST00000549328 PCDHB8Q9UN66 801 aa20.28■□□□□ 0.84
CHMP1A-207ENST00000549328 DUSP12Q9UNI6 340 aa20.28■□□□□ 0.84
CHMP1A-207ENST00000549328 ANKRD63C9JTQ0 380 aa20.27■□□□□ 0.84
CHMP1A-207ENST00000549328 M0QZQ0 153 aa20.27■□□□□ 0.84
CHMP1A-207ENST00000549328 SPTLC2O15270 562 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms