RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 RFPL2O75678 378 aa17.21■□□□□ 0.35
CHMP1A-206ENST00000549139 MAPTP10636 758 aaKnown RBP17.21■□□□□ 0.35
CHMP1A-206ENST00000549139 CMA1P23946 247 aa17.21■□□□□ 0.35
CHMP1A-206ENST00000549139 STRN3Q13033 797 aa17.21■□□□□ 0.35
CHMP1A-206ENST00000549139 KIAA0319Q5VV43 1072 aa17.21■□□□□ 0.35
CHMP1A-206ENST00000549139 ZC3H14Q6PJT7 736 aaKnown RBP17.21■□□□□ 0.35
CHMP1A-206ENST00000549139 HAUS6Q7Z4H7 955 aa17.21■□□□□ 0.35
CHMP1A-206ENST00000549139 DNAJC19Q96DA6 116 aa17.21■□□□□ 0.35
CHMP1A-206ENST00000549139 ACO2Q99798 780 aaKnown RBP17.21■□□□□ 0.35
CHMP1A-206ENST00000549139 PYM1Q9BRP8 204 aaKnown RBP17.21■□□□□ 0.35
CHMP1A-206ENST00000549139 HERC2P3Q9BVR0 1158 aa17.21■□□□□ 0.35
CHMP1A-206ENST00000549139 RNF39Q9H2S5 420 aa17.21■□□□□ 0.35
CHMP1A-206ENST00000549139 TNMDQ9H2S6 317 aa17.21■□□□□ 0.35
CHMP1A-206ENST00000549139 SLC2A4RGQ9NR83 387 aa17.21■□□□□ 0.35
CHMP1A-206ENST00000549139 KBTBD4Q9NVX7 518 aa17.21■□□□□ 0.35
CHMP1A-206ENST00000549139 USP20Q9Y2K6 914 aa17.21■□□□□ 0.35
CHMP1A-206ENST00000549139 FAN1Q9Y2M0 1017 aa17.21■□□□□ 0.35
CHMP1A-206ENST00000549139 GIT1Q9Y2X7 761 aa17.21■□□□□ 0.35
CHMP1A-206ENST00000549139 SIT1Q9Y3P8 196 aa17.21■□□□□ 0.35
CHMP1A-206ENST00000549139 USP24Q9UPU5 2620 aa17.2■□□□□ 0.34
CHMP1A-206ENST00000549139 POLR2DO15514 142 aaKnown RBP17.2■□□□□ 0.34
CHMP1A-206ENST00000549139 KRT37O76014 449 aa17.2■□□□□ 0.34
CHMP1A-206ENST00000549139 ADH1AP07327 375 aa17.2■□□□□ 0.34
CHMP1A-206ENST00000549139 ABCD1P33897 745 aa17.2■□□□□ 0.34
CHMP1A-206ENST00000549139 ANP32AP39687 249 aaKnown RBP17.2■□□□□ 0.34
CHMP1A-206ENST00000549139 AMPD3Q01432 767 aa17.2■□□□□ 0.34
CHMP1A-206ENST00000549139 DCAF4L1Q3SXM0 396 aa17.2■□□□□ 0.34
CHMP1A-206ENST00000549139 EEF1DP3Q658K8 133 aa17.2■□□□□ 0.34
CHMP1A-206ENST00000549139 APBB1IPQ7Z5R6 666 aaPredicted RBP17.2■□□□□ 0.34
CHMP1A-206ENST00000549139 URGCPQ8TCY9 931 aa17.2■□□□□ 0.34
CHMP1A-206ENST00000549139 DHX58Q96C10 678 aa17.2■□□□□ 0.34
CHMP1A-206ENST00000549139 FIZ1Q96SL8 496 aa17.2■□□□□ 0.34
CHMP1A-206ENST00000549139 NXF3Q9H4D5 531 aaKnown RBP17.2■□□□□ 0.34
CHMP1A-206ENST00000549139 ZHX3Q9H4I2 956 aa17.2■□□□□ 0.34
CHMP1A-206ENST00000549139 MAGEF1Q9HAY2 307 aa17.2■□□□□ 0.34
CHMP1A-206ENST00000549139 PTPRHQ9HD43 1115 aa17.2■□□□□ 0.34
CHMP1A-206ENST00000549139 ARHGEF3Q9NR81 526 aa17.2■□□□□ 0.34
CHMP1A-206ENST00000549139 SEL1LQ9UBV2 794 aa17.2■□□□□ 0.34
CHMP1A-206ENST00000549139 CIZ1Q9ULV3 898 aaPredicted RBP17.2■□□□□ 0.34
CHMP1A-206ENST00000549139 HES2Q9Y543 173 aa17.2■□□□□ 0.34
CHMP1A-206ENST00000549139 ZFHX4Q86UP3 3567 aa17.2■□□□□ 0.34
CHMP1A-206ENST00000549139 ZMYM2Q9UBW7 1377 aa17.19■□□□□ 0.34
CHMP1A-206ENST00000549139 C2CD2LO14523 706 aa17.19■□□□□ 0.34
CHMP1A-206ENST00000549139 GLUD1P00367 558 aa17.19■□□□□ 0.34
CHMP1A-206ENST00000549139 URODP06132 367 aa17.19■□□□□ 0.34
CHMP1A-206ENST00000549139 LAMP2P13473 410 aa17.19■□□□□ 0.34
CHMP1A-206ENST00000549139 GAP43P17677 238 aa17.19■□□□□ 0.34
CHMP1A-206ENST00000549139 RFX1P22670 979 aa17.19■□□□□ 0.34
CHMP1A-206ENST00000549139 GTF2BQ00403 316 aa17.19■□□□□ 0.34
CHMP1A-206ENST00000549139 HTR4Q13639 388 aa17.19■□□□□ 0.34
CHMP1A-206ENST00000549139 SMG7Q92540 1137 aaKnown RBP17.19■□□□□ 0.34
CHMP1A-206ENST00000549139 CNTNAP3BQ96NU0 1288 aa17.19■□□□□ 0.34
CHMP1A-206ENST00000549139 HINFPQ9BQA5 517 aa17.19■□□□□ 0.34
CHMP1A-206ENST00000549139 TARS2Q9BW92 718 aaKnown RBP17.19■□□□□ 0.34
CHMP1A-206ENST00000549139 CNTNAP3Q9BZ76 1288 aa17.19■□□□□ 0.34
CHMP1A-206ENST00000549139 ST6GALNAC4Q9H4F1 302 aa17.19■□□□□ 0.34
CHMP1A-206ENST00000549139 DPP7Q9UHL4 492 aa17.19■□□□□ 0.34
CHMP1A-206ENST00000549139 KCNH3Q9ULD8 1083 aa17.19■□□□□ 0.34
CHMP1A-206ENST00000549139 CNOT1A5YKK6 2376 aaKnown RBP17.19■□□□□ 0.34
CHMP1A-206ENST00000549139 MIA3Q5JRA6 1907 aa17.19■□□□□ 0.34
CHMP1A-206ENST00000549139 F5P12259 2224 aa17.19■□□□□ 0.34
CHMP1A-206ENST00000549139 FRMD3A2A2Y4 597 aa17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 K7ENM7 598 aa17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 C1RP00736 705 aa17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 POMCP01189 267 aa17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 MYBP10242 640 aa17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 PROZP22891 400 aa17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 STARD6P59095 220 aa17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 RSPO4Q2I0M5 234 aaPredicted RBP17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 CNNM4Q6P4Q7 775 aa17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 DCLRE1AQ6PJP8 1040 aa17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 ZPBP2Q6X784 338 aa17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 ZNF720Q7Z2F6 126 aa17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 COLGALT2Q8IYK4 626 aa17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 PJA1Q8NG27 643 aa17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 HDAC7Q8WUI4 952 aa17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 FAM193BQ96PV7 902 aaPredicted RBP17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 GAD1Q99259 594 aa17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 APOL6Q9BWW8 343 aa17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 FOXQ1Q9C009 403 aa17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 MIOSQ9NXC5 875 aa17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.18■□□□□ 0.341e-9■□□□□ 8
CHMP1A-206ENST00000549139 PARP2Q9UGN5 583 aa17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 TBX20Q9UMR3 447 aa17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 SSX2IPQ9Y2D8 614 aa17.18■□□□□ 0.34
CHMP1A-206ENST00000549139 FAM237AA0A1B0GTK4 181 aa17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 A0A1W2PQ27 194 aa17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 A0A1W2PQ64 194 aa17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 A0A1W2PQD8 194 aa17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 ARL5CA6NH57 179 aa17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 ABLIM1O14639 778 aa17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 LRRN2O75325 713 aa17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 TOM1L1O75674 476 aa17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 AKAP5P24588 427 aa17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 NMT1P30419 496 aaKnown RBP17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 GLUD2P49448 558 aa17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 DSG1Q02413 1049 aa17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 DSC1Q08554 894 aa17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 MPZL3Q6UWV2 235 aa17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 SFR1Q86XK3 245 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms