RNA–Protein interactions for RNA: ENST00000549044.5

BRF1-214, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-214ENST00000549044 CITO14578 2027 aa20.27■□□□□ 0.84
BRF1-214ENST00000549044 VCANP13611 3396 aa20.27■□□□□ 0.84
BRF1-214ENST00000549044 PVALEFA0A1B0GWK0 134 aa20.26■□□□□ 0.83
BRF1-214ENST00000549044 GOLGA8IPA6NC78 632 aa20.26■□□□□ 0.83
BRF1-214ENST00000549044 GOLGA8JA6NMD2 632 aa20.26■□□□□ 0.83
BRF1-214ENST00000549044 KLRC2P26717 231 aa20.26■□□□□ 0.83
BRF1-214ENST00000549044 SMAD4Q13485 552 aaKnown RBP20.26■□□□□ 0.83
BRF1-214ENST00000549044 CEP57Q86XR8 500 aa20.26■□□□□ 0.83
BRF1-214ENST00000549044 C12orf76Q8N812 135 aaPredicted RBP20.26■□□□□ 0.83
BRF1-214ENST00000549044 ZNF507Q8TCN5 953 aa20.26■□□□□ 0.83
BRF1-214ENST00000549044 EMILIN2Q9BXX0 1053 aa20.26■□□□□ 0.83
BRF1-214ENST00000549044 SLC39A2Q9NP94 309 aa20.26■□□□□ 0.83
BRF1-214ENST00000549044 CD320Q9NPF0 282 aa20.26■□□□□ 0.83
BRF1-214ENST00000549044 PPEF2O14830 753 aa20.25■□□□□ 0.83
BRF1-214ENST00000549044 NFICP08651 508 aa20.25■□□□□ 0.83
BRF1-214ENST00000549044 CLCN4P51793 760 aa20.25■□□□□ 0.83
BRF1-214ENST00000549044 POSTNQ15063 836 aa20.25■□□□□ 0.83
BRF1-214ENST00000549044 KRBA2Q6ZNG9 492 aa20.25■□□□□ 0.83
BRF1-214ENST00000549044 GLYCTKQ8IVS8 523 aa20.25■□□□□ 0.83
BRF1-214ENST00000549044 NELFCDQ8IXH7 590 aa20.25■□□□□ 0.83
BRF1-214ENST00000549044 TMEM87AQ8NBN3 555 aa20.25■□□□□ 0.83
BRF1-214ENST00000549044 SCFD1Q8WVM8 642 aa20.25■□□□□ 0.83
BRF1-214ENST00000549044 CASP10Q92851 521 aa20.25■□□□□ 0.83
BRF1-214ENST00000549044 DDX27Q96GQ7 796 aaKnown RBP20.25■□□□□ 0.83
BRF1-214ENST00000549044 FAM213AQ9BRX8 229 aa20.25■□□□□ 0.83
BRF1-214ENST00000549044 TTPALQ9BTX7 342 aa20.25■□□□□ 0.83
BRF1-214ENST00000549044 USP15Q9Y4E8 981 aaPredicted RBP20.25■□□□□ 0.83
BRF1-214ENST00000549044 FSD2A1L4K1 749 aa20.24■□□□□ 0.83
BRF1-214ENST00000549044 EIF3DO15371 548 aaKnown RBP eCLIP20.24■□□□□ 0.83
BRF1-214ENST00000549044 ADAM12O43184 909 aa20.24■□□□□ 0.83
BRF1-214ENST00000549044 TGFB1I1O43294 461 aa20.24■□□□□ 0.83
BRF1-214ENST00000549044 ZNF202O95125 648 aa20.24■□□□□ 0.83
BRF1-214ENST00000549044 GARTP22102 1010 aa20.24■□□□□ 0.83
BRF1-214ENST00000549044 FGFR3P22607 806 aa20.24■□□□□ 0.83
BRF1-214ENST00000549044 TKTP29401 623 aaKnown RBP20.24■□□□□ 0.83
BRF1-214ENST00000549044 RPL9P32969 192 aaKnown RBP20.24■□□□□ 0.83
BRF1-214ENST00000549044 SMAD2Q15796 467 aaKnown RBP20.24■□□□□ 0.83
BRF1-214ENST00000549044 KMT5BQ4FZB7 885 aa20.24■□□□□ 0.83
BRF1-214ENST00000549044 LNX1Q8TBB1 728 aaPredicted RBP20.24■□□□□ 0.83
BRF1-214ENST00000549044 PIK3R5Q8WYR1 880 aa20.24■□□□□ 0.83
BRF1-214ENST00000549044 FAM84AQ96KN4 292 aa20.24■□□□□ 0.83
BRF1-214ENST00000549044 TMEM206Q9H813 350 aa20.24■□□□□ 0.83
BRF1-214ENST00000549044 CIZ1Q9ULV3 898 aaPredicted RBP20.24■□□□□ 0.83
BRF1-214ENST00000549044 PDCD11Q14690 1871 aaKnown RBP20.24■□□□□ 0.83
BRF1-214ENST00000549044 LRPAP1P30533 357 aa20.23■□□□□ 0.83
BRF1-214ENST00000549044 STK4Q13043 487 aa20.23■□□□□ 0.83
BRF1-214ENST00000549044 PUS10Q3MIT2 529 aaKnown RBP20.23■□□□□ 0.83
BRF1-214ENST00000549044 SPATA1Q5VX52 437 aa20.23■□□□□ 0.83
BRF1-214ENST00000549044 ARMCX5Q6P1M9 558 aa20.23■□□□□ 0.83
BRF1-214ENST00000549044 RSPO2Q6UXX9 243 aaPredicted RBP20.23■□□□□ 0.83
BRF1-214ENST00000549044 STXBP4Q6ZWJ1 553 aa20.23■□□□□ 0.83
BRF1-214ENST00000549044 EFCAB13Q8IY85 973 aa20.23■□□□□ 0.83
BRF1-214ENST00000549044 FMR1NBQ8N0W7 255 aaPredicted RBP20.23■□□□□ 0.83
BRF1-214ENST00000549044 KIAA0895Q8NCT3 520 aa20.23■□□□□ 0.83
BRF1-214ENST00000549044 FBXL18Q96ME1 805 aa20.23■□□□□ 0.83
BRF1-214ENST00000549044 CLSTN3Q9BQT9 956 aa20.23■□□□□ 0.83
BRF1-214ENST00000549044 UBQLN1Q9UMX0 589 aaKnown RBP20.23■□□□□ 0.83
BRF1-214ENST00000549044 SSX2IPQ9Y2D8 614 aa20.23■□□□□ 0.83
BRF1-214ENST00000549044 VWA8A3KMH1 1905 aa20.22■□□□□ 0.83
BRF1-214ENST00000549044 WEE2P0C1S8 567 aa20.22■□□□□ 0.83
BRF1-214ENST00000549044 SPATA31D3P0C874 917 aa20.22■□□□□ 0.83
BRF1-214ENST00000549044 ELAVL2Q12926 359 aaKnown RBP20.22■□□□□ 0.83
BRF1-214ENST00000549044 PSMD5Q16401 504 aa20.22■□□□□ 0.83
BRF1-214ENST00000549044 RARS2Q5T160 578 aaKnown RBP20.22■□□□□ 0.83
BRF1-214ENST00000549044 SCARA3Q6AZY7 606 aa20.22■□□□□ 0.83
BRF1-214ENST00000549044 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.22■□□□□ 0.83
BRF1-214ENST00000549044 SPATA31D4Q6ZUB0 917 aa20.22■□□□□ 0.83
BRF1-214ENST00000549044 PALB2Q86YC2 1186 aa20.22■□□□□ 0.83
BRF1-214ENST00000549044 GPR65Q8IYL9 337 aa20.22■□□□□ 0.83
BRF1-214ENST00000549044 NOC3LQ8WTT2 800 aaKnown RBP20.22■□□□□ 0.83
BRF1-214ENST00000549044 SUSD6Q92537 303 aa20.22■□□□□ 0.83
BRF1-214ENST00000549044 EXOC1Q9NV70 894 aa20.22■□□□□ 0.83
BRF1-214ENST00000549044 FNIP2Q9P278 1114 aa20.22■□□□□ 0.83
BRF1-214ENST00000549044 RPN1P04843 607 aaKnown RBP20.21■□□□□ 0.83
BRF1-214ENST00000549044 ADH1AP07327 375 aa20.21■□□□□ 0.83
BRF1-214ENST00000549044 SRGAP2BP0DMP2 458 aa20.21■□□□□ 0.83
BRF1-214ENST00000549044 HOXB8P17481 243 aaPredicted RBP20.21■□□□□ 0.83
BRF1-214ENST00000549044 CYP3A5P20815 502 aa20.21■□□□□ 0.83
BRF1-214ENST00000549044 ANP32AP39687 249 aaKnown RBP20.21■□□□□ 0.83
BRF1-214ENST00000549044 DPYDQ12882 1025 aa20.21■□□□□ 0.83
BRF1-214ENST00000549044 SNW1Q13573 536 aaKnown RBP20.21■□□□□ 0.83
BRF1-214ENST00000549044 TMEM132DQ14C87 1099 aa20.21■□□□□ 0.83
BRF1-214ENST00000549044 BMT2Q1RMZ1 405 aa20.21■□□□□ 0.83
BRF1-214ENST00000549044 LILRA6Q6PI73 481 aa20.21■□□□□ 0.83
BRF1-214ENST00000549044 PPFIBP1Q86W92 1011 aa20.21■□□□□ 0.83
BRF1-214ENST00000549044 BRSK2Q8IWQ3 736 aa20.21■□□□□ 0.83
BRF1-214ENST00000549044 CD302Q8IX05 232 aa20.21■□□□□ 0.83
BRF1-214ENST00000549044 ENGASEQ8NFI3 743 aa20.21■□□□□ 0.83
BRF1-214ENST00000549044 ASB7Q9H672 318 aa20.21■□□□□ 0.83
BRF1-214ENST00000549044 AGPAT3Q9NRZ7 376 aa20.21■□□□□ 0.83
BRF1-214ENST00000549044 PLXNA3P51805 1871 aa20.21■□□□□ 0.83
BRF1-214ENST00000549044 ANK1P16157 1881 aa20.2■□□□□ 0.82
BRF1-214ENST00000549044 CLIC2O15247 247 aa20.2■□□□□ 0.82
BRF1-214ENST00000549044 EXTL3O43909 919 aa20.2■□□□□ 0.82
BRF1-214ENST00000549044 GADD45BO75293 160 aaPredicted RBP20.2■□□□□ 0.82
BRF1-214ENST00000549044 ZP2Q05996 745 aa20.2■□□□□ 0.82
BRF1-214ENST00000549044 CBWD2Q8IUF1 395 aa20.2■□□□□ 0.82
BRF1-214ENST00000549044 BEST2Q8NFU1 509 aa20.2■□□□□ 0.82
BRF1-214ENST00000549044 SUSD3Q96L08 255 aa20.2■□□□□ 0.82
BRF1-214ENST00000549044 MAN1C1Q9NR34 630 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms