RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 BEST2Q8NFU1 509 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 DHTKD1Q96HY7 919 aaPredicted RBP10.41□□□□□ -0.74
RAB5B-205ENST00000549034 TSG101Q99816 390 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 TCF25Q9BQ70 676 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 IGFLR1Q9H665 355 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 ENTPD7Q9NQZ7 604 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 TLR9Q9NR96 1032 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 DMAC2Q9NW81 257 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 MARCH5Q9NX47 278 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 DPP3Q9NY33 737 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 TUBGCP4Q9UGJ1 667 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 ADAM28Q9UKQ2 775 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 PCDHB8Q9UN66 801 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 LZTS1Q9Y250 596 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 STXBP5LQ9Y2K9 1186 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 FRMD4BQ9Y2L6 1034 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 DERAQ9Y315 318 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 PDCD11Q14690 1871 aaKnown RBP10.4□□□□□ -0.74
RAB5B-205ENST00000549034 MYO7AQ13402 2215 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 PPP1R3GB7ZBB8 358 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 C2CD2LO14523 706 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 PSMA7O14818 248 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 MBD3O95983 291 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 NFICP08651 508 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 TNNI1P19237 187 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 CYP3A5P20815 502 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 BMP6P22004 513 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 NR2F2P24468 414 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 PPP1R2P41236 205 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 CASP4P49662 377 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 WNT7BP56706 349 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 TFAMQ00059 246 aaKnown RBP10.4□□□□□ -0.74
RAB5B-205ENST00000549034 MYBPC2Q14324 1141 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 SKIV2LQ15477 1246 aaKnown RBP10.4□□□□□ -0.74
RAB5B-205ENST00000549034 COBLL1Q53SF7 1204 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 SPATA1Q5VX52 437 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 PLPP4Q5VZY2 271 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 CENPPQ6IPU0 288 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 PDE12Q6L8Q7 609 aaKnown RBP10.4□□□□□ -0.74
RAB5B-205ENST00000549034 KIAA1841Q6NSI8 718 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 FUT10Q6P4F1 479 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 SLC9A9Q8IVB4 645 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 BRSK2Q8IWQ3 736 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 TRIML1Q8N9V2 468 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 AUTS2Q8WXX7 1259 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 CCDC127Q96BQ5 260 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 MFSD14AQ96MC6 490 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 FBXL18Q96ME1 805 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 FNBP1Q96RU3 617 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 POP1Q99575 1024 aaKnown RBP10.4□□□□□ -0.74
RAB5B-205ENST00000549034 GPR62Q9BZJ7 368 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 R3HCC1Q9Y3T6 440 aaKnown RBP10.4□□□□□ -0.74
RAB5B-205ENST00000549034 NUB1Q9Y5A7 615 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 PCDHGC5Q9Y5F6 944 aa10.4□□□□□ -0.74
RAB5B-205ENST00000549034 RIOK3O14730 519 aaKnown RBP10.39□□□□□ -0.75
RAB5B-205ENST00000549034 PER2O15055 1255 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 CETN3O15182 167 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 TRAPPC3O43617 180 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 KIF4AO95239 1232 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 TNNC2P02585 160 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 SOD2P04179 222 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 DLATP10515 647 aaKnown RBP10.39□□□□□ -0.75
RAB5B-205ENST00000549034 CCNE1P24864 410 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 LRPAP1P30533 357 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 PSMC2P35998 433 aaKnown RBP10.39□□□□□ -0.75
RAB5B-205ENST00000549034 BRCC3P46736 316 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 PMS1P54277 932 aaKnown RBP10.39□□□□□ -0.75
RAB5B-205ENST00000549034 STX17P56962 302 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 CYP24A1Q07973 514 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 SMC1AQ14683 1233 aaKnown RBP10.39□□□□□ -0.75
RAB5B-205ENST00000549034 DUOXA2Q1HG44 320 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 USP41Q3LFD5 358 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 TCEAL5Q5H9L2 206 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 FAM171A1Q5VUB5 890 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 C9orf57Q5W0N0 161 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 LMBRD2Q68DH5 695 aaPredicted RBP10.39□□□□□ -0.75
RAB5B-205ENST00000549034 CD300LGQ6UXG3 332 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 EP400NLQ6ZTU2 488 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 NT5DC4Q86YG4 428 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 EFCAB13Q8IY85 973 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 CSGALNACT2Q8N6G5 542 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 MRPL43Q8N983 215 aaKnown RBP10.39□□□□□ -0.75
RAB5B-205ENST00000549034 NELFBQ8WX92 580 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 EEF2KMTQ96G04 330 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 ANKRD36BP1Q96IX9 119 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 VN1R3Q9BXE9 311 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 NSUN3Q9H649 340 aaKnown RBP10.39□□□□□ -0.75
RAB5B-205ENST00000549034 TLE6Q9H808 572 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 NGRNQ9NPE2 291 aaKnown RBP10.39□□□□□ -0.75
RAB5B-205ENST00000549034 MRPL17Q9NRX2 175 aaKnown RBP10.39□□□□□ -0.75
RAB5B-205ENST00000549034 STK39Q9UEW8 545 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 SSX2IPQ9Y2D8 614 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 C2CD2Q9Y426 696 aa10.39□□□□□ -0.75
RAB5B-205ENST00000549034 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.39□□□□□ -0.75
RAB5B-205ENST00000549034 PRRC2BQ5JSZ5 2229 aaKnown RBP10.39□□□□□ -0.75
RAB5B-205ENST00000549034 LAMA3Q16787 3333 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 TRIM49BA6NDI0 452 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 HIDE1A8MVS5 230 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 I3L4J1 428 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 PIRO00625 290 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms