RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 WDR72Q3MJ13 1102 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 ANKRD20A3Q5VUR7 823 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 RNF149Q8NC42 400 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 NETO2Q8NC67 525 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 SNF8Q96H20 258 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 HES6Q96HZ4 224 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 PNMA3Q9UL41 463 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 RIPK3Q9Y572 518 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 KAT6AQ92794 2004 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 TRAPPC3O43617 180 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 RAP1GAPP47736 663 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 OR6B2Q6IFH4 312 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 LRIG3Q6UXM1 1119 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 JPH1Q9HDC5 661 aaPredicted RBP15.04■□□□□ -0
CACNB3-209ENST00000548860 NPHS2Q9NP85 383 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 PIH1D1Q9NWS0 290 aaKnown RBP15.04■□□□□ -0
CACNB3-209ENST00000548860 XIRP1Q702N8 1843 aaKnown RBP15.04■□□□□ -0
CACNB3-209ENST00000548860 DPEP1P16444 411 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 DARS2Q6PI48 645 aaKnown RBP15.04■□□□□ -0
CACNB3-209ENST00000548860 DAW1Q8N136 415 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 SPOCK2Q92563 424 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 MAML1Q92585 1016 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 ERP27Q96DN0 273 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 TMEM237Q96Q45 408 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 MTFR1LQ9H019 292 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 MIS12Q9H081 205 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 ATP6V0A4Q9HBG4 840 aa15.04■□□□□ -0
CACNB3-209ENST00000548860 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.04■□□□□ -0
CACNB3-209ENST00000548860 IGLV3-22A0A075B6J6 115 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 YDJCA8MPS7 323 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 ENTPD3O75355 529 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 GJB1P08034 283 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 TARSP26639 723 aaKnown RBP15.03■□□□□ -0
CACNB3-209ENST00000548860 PRKCIP41743 596 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 NT5C2P49902 561 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 YARSP54577 528 aaKnown RBP15.03■□□□□ -0
CACNB3-209ENST00000548860 KRT81Q14533 505 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 DTX3LQ8TDB6 740 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 TRAPPC12Q8WVT3 735 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 HEXIM2Q96MH2 286 aaKnown RBP15.03■□□□□ -0
CACNB3-209ENST00000548860 MKNK1Q9BUB5 465 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 ZC3H4Q9UPT8 1303 aaKnown RBP15.03■□□□□ -0
CACNB3-209ENST00000548860 MYH3P11055 1940 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 CFAP69A5D8W1 941 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 RIPK2O43353 540 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 CFHP08603 1231 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 TMEM62Q0P6H9 643 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 IFRD2Q12894 506 aaPredicted RBP15.03■□□□□ -0
CACNB3-209ENST00000548860 SPRED3Q2MJR0 410 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 ZBTB41Q5SVQ8 909 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 ARHGEF18Q6ZSZ5 1173 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 PARD3BQ8TEW8 1205 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 OSBPL7Q9BZF2 842 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 CDH8P55286 799 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 CDR2Q01850 454 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 CNTN2Q02246 1040 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 NCOA4Q13772 614 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 UBA3Q8TBC4 463 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 AGR3Q8TD06 166 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 ATXN7L3BQ96GX2 97 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 CYTH2Q99418 400 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 MTMR12Q9C0I1 747 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 NEU2Q9Y3R4 380 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 SHANK3Q9BYB0 1731 aa15.03■□□□□ -0
CACNB3-209ENST00000548860 DDX3YO15523 660 aaKnown RBP15.02■□□□□ -0
CACNB3-209ENST00000548860 RNF8O76064 485 aa15.02■□□□□ -0
CACNB3-209ENST00000548860 HSPA6P17066 643 aa15.02■□□□□ -0
CACNB3-209ENST00000548860 RPL7AP62424 266 aaKnown RBP15.02■□□□□ -0
CACNB3-209ENST00000548860 KCNJ2P63252 427 aa15.02■□□□□ -0
CACNB3-209ENST00000548860 SPATA21Q7Z572 469 aa15.02■□□□□ -0
CACNB3-209ENST00000548860 CERKQ8TCT0 537 aa15.02■□□□□ -0
CACNB3-209ENST00000548860 WNK4Q96J92 1243 aa15.02■□□□□ -0
CACNB3-209ENST00000548860 ACTR5Q9H9F9 607 aaPredicted RBP15.02■□□□□ -0
CACNB3-209ENST00000548860 AGO4Q9HCK5 861 aaKnown RBP15.02■□□□□ -0
CACNB3-209ENST00000548860 SLCO1B3Q9NPD5 702 aa15.02■□□□□ -0
CACNB3-209ENST00000548860 SLC9A2Q9UBY0 812 aa15.02■□□□□ -0
CACNB3-209ENST00000548860 CHMP2BQ9UQN3 213 aa15.02■□□□□ -0
CACNB3-209ENST00000548860 MSH2P43246 934 aa15.02■□□□□ -0
CACNB3-209ENST00000548860 HIRAP54198 1017 aaPredicted RBP15.02■□□□□ -0
CACNB3-209ENST00000548860 PSMC1P62191 440 aaKnown RBP15.02■□□□□ -0
CACNB3-209ENST00000548860 FMO1Q01740 532 aa15.02■□□□□ -0
CACNB3-209ENST00000548860 RNASELQ05823 741 aaKnown RBP15.02■□□□□ -0
CACNB3-209ENST00000548860 ACAD10Q6JQN1 1059 aa15.02■□□□□ -0
CACNB3-209ENST00000548860 RHOT1Q8IXI2 618 aa15.02■□□□□ -0
CACNB3-209ENST00000548860 PPM1NQ8N819 430 aa15.02■□□□□ -0
CACNB3-209ENST00000548860 ATL2Q8NHH9 583 aa15.02■□□□□ -0
CACNB3-209ENST00000548860 MKL1Q969V6 931 aa15.02■□□□□ -0
CACNB3-209ENST00000548860 MRPL47Q9HD33 250 aaKnown RBP15.02■□□□□ -0
CACNB3-209ENST00000548860 TPX2Q9ULW0 747 aaKnown RBP15.02■□□□□ -0
CACNB3-209ENST00000548860 CYP3A7-CYP3A51PA0A087WV96 503 aa15.02□□□□□ -0.01
CACNB3-209ENST00000548860 EGFRP00533 1210 aa15.02□□□□□ -0.01
CACNB3-209ENST00000548860 VIL1P09327 827 aaKnown RBP15.02□□□□□ -0.01
CACNB3-209ENST00000548860 CYP3A7P24462 503 aa15.02□□□□□ -0.01
CACNB3-209ENST00000548860 NRLP54845 237 aa15.02□□□□□ -0.01
CACNB3-209ENST00000548860 KRT76Q01546 638 aa15.02□□□□□ -0.01
CACNB3-209ENST00000548860 CXCL9Q07325 125 aa15.02□□□□□ -0.01
CACNB3-209ENST00000548860 PPP2R5CQ13362 524 aa15.02□□□□□ -0.01
CACNB3-209ENST00000548860 AGBL2Q5U5Z8 902 aa15.02□□□□□ -0.01
CACNB3-209ENST00000548860 FYB2Q5VWT5 728 aa15.02□□□□□ -0.01
CACNB3-209ENST00000548860 PLEKHO2Q8TD55 490 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms