RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 MTCL1Q9Y4B5 1905 aaKnown RBP12.42□□□□□ -0.42
BEST3-209ENST00000548658 MYO10Q9HD67 2058 aa12.42□□□□□ -0.42
BEST3-209ENST00000548658 TRIP11Q15643 1979 aa12.41□□□□□ -0.42
BEST3-209ENST00000548658 CLUHO75153 1309 aa12.41□□□□□ -0.42
BEST3-209ENST00000548658 TTC26A0AVF1 554 aa12.41□□□□□ -0.42
BEST3-209ENST00000548658 H7C4K7 107 aa12.41□□□□□ -0.42
BEST3-209ENST00000548658 CITO14578 2027 aa12.41□□□□□ -0.42
BEST3-209ENST00000548658 OGTO15294 1046 aa12.41□□□□□ -0.42
BEST3-209ENST00000548658 XYLBO75191 536 aa12.41□□□□□ -0.42
BEST3-209ENST00000548658 TECTAO75443 2155 aa12.41□□□□□ -0.42
BEST3-209ENST00000548658 GAP43P17677 238 aa12.41□□□□□ -0.42
BEST3-209ENST00000548658 CYP3A5P20815 502 aa12.41□□□□□ -0.42
BEST3-209ENST00000548658 PAX3P23760 479 aa12.41□□□□□ -0.42
BEST3-209ENST00000548658 GBP2P32456 591 aaPredicted RBP12.41□□□□□ -0.42
BEST3-209ENST00000548658 OR1D2P34982 312 aa12.41□□□□□ -0.42
BEST3-209ENST00000548658 POU5F1Q01860 360 aaKnown RBP12.41□□□□□ -0.42
BEST3-209ENST00000548658 PPP2R3AQ06190 1150 aa12.41□□□□□ -0.42
BEST3-209ENST00000548658 SOX4Q06945 474 aaPredicted RBP12.41□□□□□ -0.42
BEST3-209ENST00000548658 SPECC1Q5M775 1068 aa12.41□□□□□ -0.42
BEST3-209ENST00000548658 FAM173BQ6P4H8 233 aa12.41□□□□□ -0.42
BEST3-209ENST00000548658 HSCBQ8IWL3 235 aa12.41□□□□□ -0.42
BEST3-209ENST00000548658 APPL2Q8NEU8 664 aa12.41□□□□□ -0.42
BEST3-209ENST00000548658 ZNF461Q8TAF7 563 aa12.41□□□□□ -0.42
BEST3-209ENST00000548658 ZNF707Q96C28 371 aaPredicted RBP12.41□□□□□ -0.42
BEST3-209ENST00000548658 HVCN1Q96D96 273 aa12.41□□□□□ -0.42
BEST3-209ENST00000548658 ASIC4Q96FT7 647 aa12.41□□□□□ -0.42
BEST3-209ENST00000548658 OXCT2Q9BYC2 517 aaPredicted RBP12.41□□□□□ -0.42
BEST3-209ENST00000548658 RPF1Q9H9Y2 349 aaKnown RBP12.41□□□□□ -0.42
BEST3-209ENST00000548658 GOLGA2P5Q9HBQ8 144 aa12.41□□□□□ -0.42
BEST3-209ENST00000548658 UBQLN1Q9UMX0 589 aaKnown RBP12.41□□□□□ -0.42
BEST3-209ENST00000548658 CDY1Q9Y6F8 540 aa12.41□□□□□ -0.42
BEST3-209ENST00000548658 A0A0B4J269 797 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 PPP6R2O75170 966 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 C8AP07357 584 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 POU2F2P09086 479 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 CXCL8P10145 99 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 MYBP10242 640 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 TKTP29401 623 aaKnown RBP12.4□□□□□ -0.42
BEST3-209ENST00000548658 ELF1P32519 619 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 NASPP49321 788 aaPredicted RBP12.4□□□□□ -0.42
BEST3-209ENST00000548658 TDGQ13569 410 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 POSTNQ15063 836 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 STK38Q15208 465 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 AXDND1Q5T1B0 1012 aaPredicted RBP12.4□□□□□ -0.42
BEST3-209ENST00000548658 SLC8B1Q6J4K2 584 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 CD300LGQ6UXG3 332 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 USP49Q70CQ1 688 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 ZNF720Q7Z2F6 126 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 MAP4K3Q8IVH8 894 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 C3orf58Q8NDZ4 430 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 LRRC15Q8TF66 581 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 DDX12PQ92771 950 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 SUSD3Q96L08 255 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 CLIC6Q96NY7 704 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 USP28Q96RU2 1077 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 MSTO1Q9BUK6 570 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 LRRC27Q9C0I9 530 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 KCNK12Q9HB15 430 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 EPS15L1Q9UBC2 864 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 MAFFQ9ULX9 164 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 EXOC7Q9UPT5 735 aa12.4□□□□□ -0.42
BEST3-209ENST00000548658 ASGR2P07307 311 aa12.39□□□□□ -0.43
BEST3-209ENST00000548658 ADRB2P07550 413 aa12.39□□□□□ -0.43
BEST3-209ENST00000548658 LRPAP1P30533 357 aa12.39□□□□□ -0.43
BEST3-209ENST00000548658 MCM4P33991 863 aa12.39□□□□□ -0.43
BEST3-209ENST00000548658 STAT6P42226 847 aa12.39□□□□□ -0.43
BEST3-209ENST00000548658 BRCC3P46736 316 aa12.39□□□□□ -0.43
BEST3-209ENST00000548658 ALCAMQ13740 583 aa12.39□□□□□ -0.43
BEST3-209ENST00000548658 ZBTB6Q15916 424 aa12.39□□□□□ -0.43
BEST3-209ENST00000548658 SEZ6Q53EL9 994 aa12.39□□□□□ -0.43
BEST3-209ENST00000548658 VARS2Q5ST30 1063 aaKnown RBP12.39□□□□□ -0.43
BEST3-209ENST00000548658 TPGS2Q68CL5 300 aa12.39□□□□□ -0.43
BEST3-209ENST00000548658 DYMQ7RTS9 669 aa12.39□□□□□ -0.43
BEST3-209ENST00000548658 LINC00301Q8NCQ3 95 aa12.39□□□□□ -0.43
BEST3-209ENST00000548658 C18orf25Q96B23 403 aaPredicted RBP12.39□□□□□ -0.43
BEST3-209ENST00000548658 KIF12Q96FN5 646 aa12.39□□□□□ -0.43
BEST3-209ENST00000548658 FIZ1Q96SL8 496 aa12.39□□□□□ -0.43
BEST3-209ENST00000548658 HAPLN2Q9GZV7 340 aa12.39□□□□□ -0.43
BEST3-209ENST00000548658 ASB7Q9H672 318 aa12.39□□□□□ -0.43
BEST3-209ENST00000548658 MRPL44Q9H9J2 332 aaKnown RBP12.39□□□□□ -0.43
BEST3-209ENST00000548658 PCDHB13Q9Y5F0 798 aa12.39□□□□□ -0.43
BEST3-209ENST00000548658 PLXNA3P51805 1871 aa12.39□□□□□ -0.43
BEST3-209ENST00000548658 TRIOO75962 3097 aa12.39□□□□□ -0.43
BEST3-209ENST00000548658 ARHGEF37A1IGU5 675 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 LACTBL1A8MY62 500 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 I3L4J1 428 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 SPTLC2O15270 562 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 ADAM12O43184 909 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 ABLIM3O94929 683 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 YEATS4O95619 227 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 LAMP2P13473 410 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 ATF2P15336 505 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 FSHRP23945 695 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 NMT1P30419 496 aaKnown RBP12.38□□□□□ -0.43
BEST3-209ENST00000548658 AMPD3Q01432 767 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 MRPL58Q14197 206 aaKnown RBP12.38□□□□□ -0.43
BEST3-209ENST00000548658 ENOX2Q16206 610 aaKnown RBP12.38□□□□□ -0.43
BEST3-209ENST00000548658 ATL3Q6DD88 541 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 ADALQ6DHV7 355 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 ZNF280DQ6N043 979 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms