RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 BMP8BP34820 402 aa5.44□□□□□ -1.54
APP-217ENST00000548570 MLH1P40692 756 aa5.44□□□□□ -1.54
APP-217ENST00000548570 ZNF165P49910 485 aa5.44□□□□□ -1.54
APP-217ENST00000548570 SCNN1GP51170 649 aa5.44□□□□□ -1.54
APP-217ENST00000548570 RABGGTBP53611 331 aa5.44□□□□□ -1.54
APP-217ENST00000548570 MARSP56192 900 aaKnown RBP5.44□□□□□ -1.54
APP-217ENST00000548570 SNRPFP62306 86 aaKnown RBP5.44□□□□□ -1.54
APP-217ENST00000548570 HTRA4P83105 476 aaPredicted RBP5.44□□□□□ -1.54
APP-217ENST00000548570 FKBP3Q00688 224 aaKnown RBP5.44□□□□□ -1.54
APP-217ENST00000548570 CYP24A1Q07973 514 aa5.44□□□□□ -1.54
APP-217ENST00000548570 PPP3CAQ08209 521 aa5.44□□□□□ -1.54
APP-217ENST00000548570 IKBKEQ14164 716 aa5.44□□□□□ -1.54
APP-217ENST00000548570 PTPN21Q16825 1174 aa5.44□□□□□ -1.54
APP-217ENST00000548570 CT47A1Q5JQC4 288 aaPredicted RBP5.44□□□□□ -1.54
APP-217ENST00000548570 MIIPQ5JXC2 388 aa5.44□□□□□ -1.54
APP-217ENST00000548570 GLRA4Q5JXX5 417 aa5.44□□□□□ -1.54
APP-217ENST00000548570 LMBRD2Q68DH5 695 aaPredicted RBP5.44□□□□□ -1.54
APP-217ENST00000548570 SLFN12LQ6IEE8 588 aa5.44□□□□□ -1.54
APP-217ENST00000548570 ARMCX5Q6P1M9 558 aa5.44□□□□□ -1.54
APP-217ENST00000548570 PSRC1Q6PGN9 363 aaPredicted RBP5.44□□□□□ -1.54
APP-217ENST00000548570 C15orf39Q6ZRI6 1047 aa5.44□□□□□ -1.54
APP-217ENST00000548570 STXBP4Q6ZWJ1 553 aa5.44□□□□□ -1.54
APP-217ENST00000548570 HS2ST1Q7LGA3 356 aa5.44□□□□□ -1.54
APP-217ENST00000548570 FILIP1Q7Z7B0 1213 aa5.44□□□□□ -1.54
APP-217ENST00000548570 TMEM173Q86WV6 379 aaPredicted RBP5.44□□□□□ -1.54
APP-217ENST00000548570 NPAS4Q8IUM7 802 aa5.44□□□□□ -1.54
APP-217ENST00000548570 TRIM59Q8IWR1 403 aa5.44□□□□□ -1.54
APP-217ENST00000548570 RPUSD2Q8IZ73 545 aaKnown RBP5.44□□□□□ -1.54
APP-217ENST00000548570 GPD1LQ8N335 351 aa5.44□□□□□ -1.54
APP-217ENST00000548570 CSGALNACT2Q8N6G5 542 aa5.44□□□□□ -1.54
APP-217ENST00000548570 AOPEPQ8N6M6 819 aa5.44□□□□□ -1.54
APP-217ENST00000548570 XXYLT1Q8NBI6 393 aa5.44□□□□□ -1.54
APP-217ENST00000548570 C3orf58Q8NDZ4 430 aa5.44□□□□□ -1.54
APP-217ENST00000548570 OR5B17Q8NGF7 314 aa5.44□□□□□ -1.54
APP-217ENST00000548570 KCNV2Q8TDN2 545 aa5.44□□□□□ -1.54
APP-217ENST00000548570 PARD3BQ8TEW8 1205 aa5.44□□□□□ -1.54
APP-217ENST00000548570 BCL7CQ8WUZ0 217 aaPredicted RBP5.44□□□□□ -1.54
APP-217ENST00000548570 SLC35C1Q96A29 364 aa5.44□□□□□ -1.54
APP-217ENST00000548570 CCDC47Q96A33 483 aaKnown RBP5.44□□□□□ -1.54
APP-217ENST00000548570 ELMO3Q96BJ8 720 aa5.44□□□□□ -1.54
APP-217ENST00000548570 PPP1R10Q96QC0 940 aaKnown RBP5.44□□□□□ -1.54
APP-217ENST00000548570 PAAF1Q9BRP4 392 aa5.44□□□□□ -1.54
APP-217ENST00000548570 TCHPQ9BT92 498 aa5.44□□□□□ -1.54
APP-217ENST00000548570 MKNK1Q9BUB5 465 aa5.44□□□□□ -1.54
APP-217ENST00000548570 APOL6Q9BWW8 343 aa5.44□□□□□ -1.54
APP-217ENST00000548570 SRRTQ9BXP5 876 aaKnown RBP5.44□□□□□ -1.54
APP-217ENST00000548570 GTPBP4Q9BZE4 634 aaKnown RBP5.44□□□□□ -1.54
APP-217ENST00000548570 CWH43Q9H720 699 aa5.44□□□□□ -1.54
APP-217ENST00000548570 PDE11AQ9HCR9 933 aa5.44□□□□□ -1.54
APP-217ENST00000548570 PRDM9Q9NQV7 894 aa5.44□□□□□ -1.54
APP-217ENST00000548570 C1orf112Q9NSG2 853 aa5.44□□□□□ -1.54
APP-217ENST00000548570 INTS13Q9NVM9 706 aa5.44□□□□□ -1.54
APP-217ENST00000548570 TMEM161AQ9NX61 479 aa5.44□□□□□ -1.54
APP-217ENST00000548570 CNTN3Q9P232 1028 aa5.44□□□□□ -1.54
APP-217ENST00000548570 CGNQ9P2M7 1197 aaKnown RBP5.44□□□□□ -1.54
APP-217ENST00000548570 PRKAG2Q9UGJ0 569 aa5.44□□□□□ -1.54
APP-217ENST00000548570 TUBGCP4Q9UGJ1 667 aa5.44□□□□□ -1.54
APP-217ENST00000548570 SIX4Q9UIU6 781 aa5.44□□□□□ -1.54
APP-217ENST00000548570 EXOC7Q9UPT5 735 aa5.44□□□□□ -1.54
APP-217ENST00000548570 YBX2Q9Y2T7 364 aaKnown RBP5.44□□□□□ -1.54
APP-217ENST00000548570 NFE2L3Q9Y4A8 694 aa5.44□□□□□ -1.54
APP-217ENST00000548570 NR2E3Q9Y5X4 410 aa5.44□□□□□ -1.54
APP-217ENST00000548570 ALPK3Q96L96 1907 aa5.44□□□□□ -1.54
APP-217ENST00000548570 BICDL2A1A5D9 508 aa5.43□□□□□ -1.54
APP-217ENST00000548570 LRRC10BA6NIK2 292 aa5.43□□□□□ -1.54
APP-217ENST00000548570 KIAA0391O15091 583 aaKnown RBP5.43□□□□□ -1.54
APP-217ENST00000548570 CETN3O15182 167 aa5.43□□□□□ -1.54
APP-217ENST00000548570 MAPK13O15264 365 aa5.43□□□□□ -1.54
APP-217ENST00000548570 SPTLC1O15269 473 aa5.43□□□□□ -1.54
APP-217ENST00000548570 SLC16A3O15427 465 aaKnown RBP5.43□□□□□ -1.54
APP-217ENST00000548570 CALUO43852 315 aaPredicted RBP5.43□□□□□ -1.54
APP-217ENST00000548570 EXOC3O60645 756 aa5.43□□□□□ -1.54
APP-217ENST00000548570 UPP2O95045 317 aa5.43□□□□□ -1.54
APP-217ENST00000548570 KIF20AO95235 890 aa5.43□□□□□ -1.54
APP-217ENST00000548570 VNN1O95497 513 aa5.43□□□□□ -1.54
APP-217ENST00000548570 CST3P01034 146 aaPredicted RBP5.43□□□□□ -1.54
APP-217ENST00000548570 POMCP01189 267 aa5.43□□□□□ -1.54
APP-217ENST00000548570 C4BPAP04003 597 aaKnown RBP5.43□□□□□ -1.54
APP-217ENST00000548570 ITGB1P05556 798 aa5.43□□□□□ -1.54
APP-217ENST00000548570 ITGA4P13612 1032 aa5.43□□□□□ -1.54
APP-217ENST00000548570 IBSPP21815 317 aaPredicted RBP5.43□□□□□ -1.54
APP-217ENST00000548570 PSMC2P35998 433 aaKnown RBP5.43□□□□□ -1.54
APP-217ENST00000548570 PBX3P40426 434 aa5.43□□□□□ -1.54
APP-217ENST00000548570 PPP1R2P41236 205 aa5.43□□□□□ -1.54
APP-217ENST00000548570 RAB27AP51159 221 aa5.43□□□□□ -1.54
APP-217ENST00000548570 POU5F1Q01860 360 aaKnown RBP5.43□□□□□ -1.54
APP-217ENST00000548570 MYL5Q02045 173 aa5.43□□□□□ -1.54
APP-217ENST00000548570 APBA1Q02410 837 aa5.43□□□□□ -1.54
APP-217ENST00000548570 DSC1Q08554 894 aa5.43□□□□□ -1.54
APP-217ENST00000548570 PSMD6Q15008 389 aa5.43□□□□□ -1.54
APP-217ENST00000548570 CBWD6Q4V339 395 aa5.43□□□□□ -1.54
APP-217ENST00000548570 CBWD3Q5JTY5 395 aa5.43□□□□□ -1.54
APP-217ENST00000548570 CBWD5Q5RIA9 395 aa5.43□□□□□ -1.54
APP-217ENST00000548570 TDRD10Q5VZ19 366 aaKnown RBP5.43□□□□□ -1.54
APP-217ENST00000548570 CEP135Q66GS9 1140 aa5.43□□□□□ -1.54
APP-217ENST00000548570 JADE1Q6IE81 842 aa5.43□□□□□ -1.54
APP-217ENST00000548570 FAM117BQ6P1L5 589 aa5.43□□□□□ -1.54
APP-217ENST00000548570 HERC6Q8IVU3 1022 aa5.43□□□□□ -1.54
APP-217ENST00000548570 FAM186BQ8IYM0 893 aa5.43□□□□□ -1.54
APP-217ENST00000548570 C1orf127Q8N9H9 656 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms