RNA–Protein interactions for RNA: ENST00000548496.1

KRT18-205, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-205ENST00000548496 MED15Q96RN5 788 aa13.12□□□□□ -0.31
KRT18-205ENST00000548496 GAS2L1Q99501 681 aaPredicted RBP13.12□□□□□ -0.31
KRT18-205ENST00000548496 TSG101Q99816 390 aa13.12□□□□□ -0.31
KRT18-205ENST00000548496 DUSP9Q99956 384 aaKnown RBP13.12□□□□□ -0.31
KRT18-205ENST00000548496 GZF1Q9H116 711 aaPredicted RBP13.12□□□□□ -0.31
KRT18-205ENST00000548496 ASB7Q9H672 318 aa13.12□□□□□ -0.31
KRT18-205ENST00000548496 MMRN2Q9H8L6 949 aa13.12□□□□□ -0.31
KRT18-205ENST00000548496 SLC38A7Q9NVC3 462 aa13.12□□□□□ -0.31
KRT18-205ENST00000548496 DPP3Q9NY33 737 aa13.12□□□□□ -0.31
KRT18-205ENST00000548496 CGNQ9P2M7 1197 aaKnown RBP13.12□□□□□ -0.31
KRT18-205ENST00000548496 UBQLN1Q9UMX0 589 aaKnown RBP13.12□□□□□ -0.31
KRT18-205ENST00000548496 MTCH2Q9Y6C9 303 aa13.12□□□□□ -0.31
KRT18-205ENST00000548496 VWA8A3KMH1 1905 aa13.11□□□□□ -0.31
KRT18-205ENST00000548496 C2CD2LO14523 706 aa13.11□□□□□ -0.31
KRT18-205ENST00000548496 TNNI1P19237 187 aa13.11□□□□□ -0.31
KRT18-205ENST00000548496 PLCB3Q01970 1234 aa13.11□□□□□ -0.31
KRT18-205ENST00000548496 PAK1Q13153 545 aa13.11□□□□□ -0.31
KRT18-205ENST00000548496 NFKBIBQ15653 356 aa13.11□□□□□ -0.31
KRT18-205ENST00000548496 COBLL1Q53SF7 1204 aa13.11□□□□□ -0.31
KRT18-205ENST00000548496 SPATA1Q5VX52 437 aa13.11□□□□□ -0.31
KRT18-205ENST00000548496 FUT10Q6P4F1 479 aa13.11□□□□□ -0.31
KRT18-205ENST00000548496 DCLRE1AQ6PJP8 1040 aa13.11□□□□□ -0.31
KRT18-205ENST00000548496 TMC7Q7Z402 723 aa13.11□□□□□ -0.31
KRT18-205ENST00000548496 ADGRD2Q7Z7M1 963 aa13.11□□□□□ -0.31
KRT18-205ENST00000548496 RBM23Q86U06 439 aaKnown RBP13.11□□□□□ -0.31
KRT18-205ENST00000548496 CEP57Q86XR8 500 aa13.11□□□□□ -0.31
KRT18-205ENST00000548496 SLC9A9Q8IVB4 645 aa13.11□□□□□ -0.31
KRT18-205ENST00000548496 BEST2Q8NFU1 509 aa13.11□□□□□ -0.31
KRT18-205ENST00000548496 MTMR12Q9C0I1 747 aa13.11□□□□□ -0.31
KRT18-205ENST00000548496 KIAA1586Q9HCI6 787 aa13.11□□□□□ -0.31
KRT18-205ENST00000548496 INTS13Q9NVM9 706 aa13.11□□□□□ -0.31
KRT18-205ENST00000548496 ADAM28Q9UKQ2 775 aa13.11□□□□□ -0.31
KRT18-205ENST00000548496 LAMA2P24043 3122 aaKnown RBP13.11□□□□□ -0.31
KRT18-205ENST00000548496 LRRIQ3A6PVS8 624 aaPredicted RBP13.1□□□□□ -0.31
KRT18-205ENST00000548496 HIDE1A8MVS5 230 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 PER2O15055 1255 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 CETN3O15182 167 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 CXCL14O95715 111 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 ITGB3P05106 788 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 KRT19P08727 400 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 TRIM49P0CI25 452 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 TRIM49CP0CI26 452 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 RPL13P26373 211 aaKnown RBP13.1□□□□□ -0.31
KRT18-205ENST00000548496 POLR2BP30876 1174 aaKnown RBP13.1□□□□□ -0.31
KRT18-205ENST00000548496 GTF2F1P35269 517 aaKnown RBP eCLIP13.1□□□□□ -0.31
KRT18-205ENST00000548496 PPM1AP35813 382 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 PSMD6Q15008 389 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 FAM171A1Q5VUB5 890 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 C9orf57Q5W0N0 161 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 TTI2Q6NXR4 508 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 SASS6Q6UVJ0 657 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 RBM43Q6ZSC3 357 aaKnown RBP13.1□□□□□ -0.31
KRT18-205ENST00000548496 DDX53Q86TM3 631 aaKnown RBP13.1□□□□□ -0.31
KRT18-205ENST00000548496 CREBRFQ8IUR6 639 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 FAM186BQ8IYM0 893 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 CSGALNACT2Q8N6G5 542 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 RSPH1Q8WYR4 309 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 FNBP1Q96RU3 617 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 TCF25Q9BQ70 676 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 SRRTQ9BXP5 876 aaKnown RBP13.1□□□□□ -0.31
KRT18-205ENST00000548496 IGFLR1Q9H665 355 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.1□□□□□ -0.31
KRT18-205ENST00000548496 ENTPD7Q9NQZ7 604 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 TLR9Q9NR96 1032 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 PUF60Q9UHX1 559 aaKnown RBP13.1□□□□□ -0.31
KRT18-205ENST00000548496 AGAP1Q9UPQ3 857 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 FRMD4BQ9Y2L6 1034 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 CHD9Q3L8U1 2897 aa13.1□□□□□ -0.31
KRT18-205ENST00000548496 SPTLC1O15269 473 aa13.09□□□□□ -0.31
KRT18-205ENST00000548496 XPOTO43592 962 aaKnown RBP13.09□□□□□ -0.31
KRT18-205ENST00000548496 TMEM191BP0C7N4 346 aa13.09□□□□□ -0.31
KRT18-205ENST00000548496 RPL17P18621 184 aaKnown RBP13.09□□□□□ -0.31
KRT18-205ENST00000548496 CYP3A5P20815 502 aa13.09□□□□□ -0.31
KRT18-205ENST00000548496 RPL9P32969 192 aaKnown RBP13.09□□□□□ -0.31
KRT18-205ENST00000548496 PSMC2P35998 433 aaKnown RBP13.09□□□□□ -0.31
KRT18-205ENST00000548496 MYBPC2Q14324 1141 aa13.09□□□□□ -0.31
KRT18-205ENST00000548496 NFIL3Q16649 462 aa13.09□□□□□ -0.31
KRT18-205ENST00000548496 EDRF1Q3B7T1 1238 aa13.09□□□□□ -0.31
KRT18-205ENST00000548496 TIGD5Q53EQ6 642 aa13.09□□□□□ -0.31
KRT18-205ENST00000548496 HSP90AA4PQ58FG1 418 aa13.09□□□□□ -0.31
KRT18-205ENST00000548496 C1orf220Q5T0J3 134 aa13.09□□□□□ -0.31
KRT18-205ENST00000548496 PRSS55Q6UWB4 352 aaPredicted RBP13.09□□□□□ -0.31
KRT18-205ENST00000548496 GLYCTKQ8IVS8 523 aa13.09□□□□□ -0.31
KRT18-205ENST00000548496 C1orf127Q8N9H9 656 aa13.09□□□□□ -0.31
KRT18-205ENST00000548496 MLKLQ8NB16 471 aa13.09□□□□□ -0.31
KRT18-205ENST00000548496 PARD3BQ8TEW8 1205 aa13.09□□□□□ -0.31
KRT18-205ENST00000548496 CACTINQ8WUQ7 758 aaKnown RBP13.09□□□□□ -0.31
KRT18-205ENST00000548496 MRPL38Q96DV4 380 aaKnown RBP13.09□□□□□ -0.31
KRT18-205ENST00000548496 DDX27Q96GQ7 796 aaKnown RBP13.09□□□□□ -0.31
KRT18-205ENST00000548496 UROC1Q96N76 676 aa13.09□□□□□ -0.31
KRT18-205ENST00000548496 CGRRF1Q99675 332 aa13.09□□□□□ -0.31
KRT18-205ENST00000548496 GTPBP4Q9BZE4 634 aaKnown RBP13.09□□□□□ -0.31
KRT18-205ENST00000548496 SIX4Q9UIU6 781 aa13.09□□□□□ -0.31
KRT18-205ENST00000548496 DERAQ9Y315 318 aa13.09□□□□□ -0.31
KRT18-205ENST00000548496 C2CD2Q9Y426 696 aa13.09□□□□□ -0.31
KRT18-205ENST00000548496 NUB1Q9Y5A7 615 aa13.09□□□□□ -0.31
KRT18-205ENST00000548496 TIMM13Q9Y5L4 95 aaPredicted RBP13.09□□□□□ -0.31
KRT18-205ENST00000548496 BRWD1Q9NSI6 2320 aa13.08□□□□□ -0.31
KRT18-205ENST00000548496 SZT2Q5T011 3432 aa13.08□□□□□ -0.32
KRT18-205ENST00000548496 PIRO00625 290 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms