RNA–Protein interactions for RNA: ENST00000548431.1

CALCOCO1-211, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 612 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-211ENST00000548431 RAB20Q9NX57 234 aa7.71□□□□□ -1.18
CALCOCO1-211ENST00000548431 APEX2Q9UBZ4 518 aa7.71□□□□□ -1.18
CALCOCO1-211ENST00000548431 STK39Q9UEW8 545 aa7.71□□□□□ -1.18
CALCOCO1-211ENST00000548431 MYO6Q9UM54 1294 aa7.71□□□□□ -1.18
CALCOCO1-211ENST00000548431 USP20Q9Y2K6 914 aa7.71□□□□□ -1.18
CALCOCO1-211ENST00000548431 LAMA3Q16787 3333 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 TRIOBPQ9H2D6 2365 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 TRIP11Q15643 1979 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 A0A1W2PQJ5 194 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 TULP1O00294 542 aaPredicted RBP7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 TRAPPC3O43617 180 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 C4BPAP04003 597 aaKnown RBP7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 AKAP5P24588 427 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 LRPAP1P30533 357 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 MLH1P40692 756 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 MFAP3P55082 362 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 DLG4P78352 724 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 GCNT1Q02742 428 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 RNASELQ05823 741 aaKnown RBP7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 PPP3CAQ08209 521 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 TUSC3Q13454 348 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 NCOA4Q13772 614 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 GPNMBQ14956 572 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 SV2CQ496J9 727 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 EPC2Q52LR7 807 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 NOMO2Q5JPE7 1267 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 TRIM65Q6PJ69 517 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 CACNA2D4Q7Z3S7 1137 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 EHBP1Q8NDI1 1231 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 SLC9A7Q96T83 725 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 GAD1Q99259 594 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 MTMR12Q9C0I1 747 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 INTS2Q9H0H0 1204 aaKnown RBP7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 MMRN2Q9H8L6 949 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 VRTNQ9H8Y1 702 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 DPP3Q9NY33 737 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 CEP72Q9P209 647 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 HES2Q9Y543 173 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 TET1Q8NFU7 2136 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 COL4A6Q14031 1691 aa7.7□□□□□ -1.18
CALCOCO1-211ENST00000548431 OFD1O75665 1012 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 ASS1P00966 412 aaKnown RBP7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 HLA-DRAP01903 254 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 ITGB3P05106 788 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 NFICP08651 508 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 KRT19P08727 400 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 FAM163BP0C2L3 166 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 PON1P27169 355 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 PBX1P40424 430 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 WDR5P61964 334 aaKnown RBP7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 TNNC1P63316 161 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 NOP14P78316 857 aaKnown RBP7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 ZBED6P86452 979 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 ELAVL2Q12926 359 aaKnown RBP7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 ZBTB6Q15916 424 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 ZNF699Q32M78 642 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 CBWD6Q4V339 395 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 ZNF667Q5HYK9 610 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 CBWD3Q5JTY5 395 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 CBWD5Q5RIA9 395 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 C1orf220Q5T0J3 134 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 TDRD10Q5VZ19 366 aaKnown RBP7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 AGMOQ6ZNB7 445 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 RTN4RL1Q86UN2 441 aaPredicted RBP7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 EFCAB13Q8IY85 973 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 TMEM192Q8IY95 271 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 CMTR2Q8IYT2 770 aaKnown RBP7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 ZSWIM2Q8NEG5 633 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 OR5B17Q8NGF7 314 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 SPATA18Q8TC71 538 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 TAS1R2Q8TE23 839 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 LINC01599Q8WXQ3 324 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 HERVK_113Q902F9 699 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 BADQ92934 168 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 TOP1MTQ969P6 601 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 NAP1L5Q96NT1 182 aaPredicted RBP7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 PPP1R10Q96QC0 940 aaKnown RBP7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 SPAG5Q96R06 1193 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 POP1Q99575 1024 aaKnown RBP7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 TMEM175Q9BSA9 504 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 NIF3L1Q9GZT8 377 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 AAASQ9NRG9 546 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 FAM207AQ9NSI2 230 aaPredicted RBP7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 ZNHIT6Q9NWK9 470 aaKnown RBP7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 SIK3Q9Y2K2 1263 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 LUC7L2Q9Y383 392 aaKnown RBP7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 SLC4A7Q9Y6M7 1214 aa7.69□□□□□ -1.18
CALCOCO1-211ENST00000548431 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.68□□□□□ -1.18
CALCOCO1-211ENST00000548431 ANO9A1A5B4 782 aa7.68□□□□□ -1.18
CALCOCO1-211ENST00000548431 ZBBXA8MT70 800 aa7.68□□□□□ -1.18
CALCOCO1-211ENST00000548431 TMEM189-UBE2V1I3L0A0 370 aa7.68□□□□□ -1.18
CALCOCO1-211ENST00000548431 PIRO00625 290 aa7.68□□□□□ -1.18
CALCOCO1-211ENST00000548431 PTGESO14684 152 aa7.68□□□□□ -1.18
CALCOCO1-211ENST00000548431 TEX33O43247 280 aa7.68□□□□□ -1.18
CALCOCO1-211ENST00000548431 DGKIO75912 1065 aa7.68□□□□□ -1.18
CALCOCO1-211ENST00000548431 KIF4AO95239 1232 aa7.68□□□□□ -1.18
CALCOCO1-211ENST00000548431 PTMAP06454 111 aaKnown RBP7.68□□□□□ -1.18
CALCOCO1-211ENST00000548431 UCHL3P15374 230 aa7.68□□□□□ -1.18
CALCOCO1-211ENST00000548431 ITGB8P26012 769 aa7.68□□□□□ -1.18
CALCOCO1-211ENST00000548431 TAF6P49848 677 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms