RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 NXPE3Q969Y0 559 aa16.68■□□□□ 0.26
SNX29P1-201ENST00000548357 MRPL4Q9BYD3 311 aaKnown RBP16.68■□□□□ 0.26
SNX29P1-201ENST00000548357 TMEM134Q9H6X4 195 aa16.68■□□□□ 0.26
SNX29P1-201ENST00000548357 KMT5AQ9NQR1 393 aa16.68■□□□□ 0.26
SNX29P1-201ENST00000548357 TUBGCP4Q9UGJ1 667 aa16.68■□□□□ 0.26
SNX29P1-201ENST00000548357 SPAG1Q07617 926 aa16.67■□□□□ 0.26
SNX29P1-201ENST00000548357 DMP1Q13316 513 aaPredicted RBP16.67■□□□□ 0.26
SNX29P1-201ENST00000548357 SNW1Q13573 536 aaKnown RBP16.67■□□□□ 0.26
SNX29P1-201ENST00000548357 PABPC1LQ4VXU2 614 aaKnown RBP16.67■□□□□ 0.26
SNX29P1-201ENST00000548357 VARS2Q5ST30 1063 aaKnown RBP16.67■□□□□ 0.26
SNX29P1-201ENST00000548357 KRT79Q5XKE5 535 aa16.67■□□□□ 0.26
SNX29P1-201ENST00000548357 PHLDB3Q6NSJ2 640 aa16.67■□□□□ 0.26
SNX29P1-201ENST00000548357 MAML2Q8IZL2 1156 aaPredicted RBP16.67■□□□□ 0.26
SNX29P1-201ENST00000548357 ADSSL1Q8N142 457 aa16.67■□□□□ 0.26
SNX29P1-201ENST00000548357 TCEAL4Q96EI5 215 aa16.67■□□□□ 0.26
SNX29P1-201ENST00000548357 UROC1Q96N76 676 aa16.67■□□□□ 0.26
SNX29P1-201ENST00000548357 CCDC94Q9BW85 323 aaPredicted RBP16.67■□□□□ 0.26
SNX29P1-201ENST00000548357 CNTN3Q9P232 1028 aa16.67■□□□□ 0.26
SNX29P1-201ENST00000548357 DNM3Q9UQ16 869 aa16.67■□□□□ 0.26
SNX29P1-201ENST00000548357 BACE2Q9Y5Z0 518 aa16.67■□□□□ 0.26
SNX29P1-201ENST00000548357 ZNF638Q14966 1978 aaKnown RBP16.66■□□□□ 0.26
SNX29P1-201ENST00000548357 CEP250Q9BV73 2442 aa16.66■□□□□ 0.26
SNX29P1-201ENST00000548357 SHISA7A6NL88 538 aa16.66■□□□□ 0.26
SNX29P1-201ENST00000548357 POU2F2P09086 479 aa16.66■□□□□ 0.26
SNX29P1-201ENST00000548357 MCF2P10911 925 aa16.66■□□□□ 0.26
SNX29P1-201ENST00000548357 KCNE1P15382 129 aa16.66■□□□□ 0.26
SNX29P1-201ENST00000548357 CD72P21854 359 aa16.66■□□□□ 0.26
SNX29P1-201ENST00000548357 PRPHP41219 470 aa16.66■□□□□ 0.26
SNX29P1-201ENST00000548357 CCR2P41597 374 aa16.66■□□□□ 0.26
SNX29P1-201ENST00000548357 SLC12A3P55017 1021 aa16.66■□□□□ 0.26
SNX29P1-201ENST00000548357 ARPP19P56211 112 aa16.66■□□□□ 0.26
SNX29P1-201ENST00000548357 ATP2C1P98194 919 aaPredicted RBP16.66■□□□□ 0.26
SNX29P1-201ENST00000548357 SLC10A6Q3KNW5 377 aa16.66■□□□□ 0.26
SNX29P1-201ENST00000548357 HYIQ5T013 277 aa16.66■□□□□ 0.26
SNX29P1-201ENST00000548357 PDXDC1Q6P996 788 aa16.66■□□□□ 0.26
SNX29P1-201ENST00000548357 MPZL3Q6UWV2 235 aa16.66■□□□□ 0.26
SNX29P1-201ENST00000548357 TMEM161BQ8NDZ6 487 aa16.66■□□□□ 0.26
SNX29P1-201ENST00000548357 PJA1Q8NG27 643 aa16.66■□□□□ 0.26
SNX29P1-201ENST00000548357 MCRS1Q96EZ8 462 aa16.66■□□□□ 0.26
SNX29P1-201ENST00000548357 ANKFY1Q9P2R3 1169 aa16.66■□□□□ 0.26
SNX29P1-201ENST00000548357 NCANO14594 1321 aa16.66■□□□□ 0.26
SNX29P1-201ENST00000548357 CACNA1AO00555 2505 aa16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 XYLBO75191 536 aa16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 ABLIM3O94929 683 aa16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 RHOP08100 348 aa16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 MAPTP10636 758 aaKnown RBP16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 RFX1P22670 979 aa16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 FCARP24071 287 aa16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 GUCY2CP25092 1073 aa16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 GUCY2FP51841 1108 aa16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 YARSP54577 528 aaKnown RBP16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 STARD6P59095 220 aa16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 MRPL58Q14197 206 aaKnown RBP16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 TMEM119Q4V9L6 283 aa16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 ARSHQ5FYA8 562 aa16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 PRSS36Q5K4E3 855 aa16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 ZBTB41Q5SVQ8 909 aa16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 MCTP1Q6DN14 999 aa16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 SLC8B1Q6J4K2 584 aa16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 DTHD1Q6ZMT9 781 aa16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 ANKS3Q6ZW76 656 aa16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 DRC1Q96MC2 740 aa16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 ACAP3Q96P50 834 aa16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 FBXL5Q9UKA1 691 aa16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 SIT1Q9Y3P8 196 aa16.65■□□□□ 0.26
SNX29P1-201ENST00000548357 ARHGEF37A1IGU5 675 aa16.64■□□□□ 0.25
SNX29P1-201ENST00000548357 VWA3AA6NCI4 1184 aa16.64■□□□□ 0.25
SNX29P1-201ENST00000548357 VNN2O95498 520 aa16.64■□□□□ 0.25
SNX29P1-201ENST00000548357 SP9P0CG40 484 aa16.64■□□□□ 0.25
SNX29P1-201ENST00000548357 CXCL8P10145 99 aa16.64■□□□□ 0.25
SNX29P1-201ENST00000548357 TNFSF9P41273 254 aa16.64■□□□□ 0.25
SNX29P1-201ENST00000548357 GRIN1Q05586 938 aa16.64■□□□□ 0.25
SNX29P1-201ENST00000548357 MLF2Q15773 248 aaPredicted RBP16.64■□□□□ 0.25
SNX29P1-201ENST00000548357 UVSSAQ2YD98 709 aa16.64■□□□□ 0.25
SNX29P1-201ENST00000548357 HS6ST3Q8IZP7 471 aa16.64■□□□□ 0.25
SNX29P1-201ENST00000548357 SYT2Q8N9I0 419 aaPredicted RBP16.64■□□□□ 0.25
SNX29P1-201ENST00000548357 DDX23Q9BUQ8 820 aaKnown RBP16.64■□□□□ 0.25
SNX29P1-201ENST00000548357 TOPORSQ9NS56 1045 aaPredicted RBP16.64■□□□□ 0.25
SNX29P1-201ENST00000548357 MRPS23Q9Y3D9 190 aaKnown RBP16.64■□□□□ 0.25
SNX29P1-201ENST00000548357 ZFP37Q9Y6Q3 630 aaPredicted RBP16.64■□□□□ 0.25
SNX29P1-201ENST00000548357 LAD1O00515 517 aa16.63■□□□□ 0.25
SNX29P1-201ENST00000548357 PPEF2O14830 753 aa16.63■□□□□ 0.25
SNX29P1-201ENST00000548357 MOSPD3O75425 235 aa16.63■□□□□ 0.25
SNX29P1-201ENST00000548357 PLS3P13797 630 aa16.63■□□□□ 0.25
SNX29P1-201ENST00000548357 GJB2P29033 226 aa16.63■□□□□ 0.25
SNX29P1-201ENST00000548357 NOLC1Q14978 699 aaKnown RBP eCLIP16.63■□□□□ 0.25
SNX29P1-201ENST00000548357 TANGO2Q6ICL3 276 aa16.63■□□□□ 0.25
SNX29P1-201ENST00000548357 MTSS1LQ765P7 747 aa16.63■□□□□ 0.25
SNX29P1-201ENST00000548357 ZNF461Q8TAF7 563 aa16.63■□□□□ 0.25
SNX29P1-201ENST00000548357 TMX3Q96JJ7 454 aa16.63■□□□□ 0.25
SNX29P1-201ENST00000548357 SUSD3Q96L08 255 aa16.63■□□□□ 0.25
SNX29P1-201ENST00000548357 TBC1D32Q96NH3 1257 aa16.63■□□□□ 0.25
SNX29P1-201ENST00000548357 NTPCRQ9BSD7 190 aaKnown RBP16.63■□□□□ 0.25
SNX29P1-201ENST00000548357 TCHPQ9BT92 498 aa16.63■□□□□ 0.25
SNX29P1-201ENST00000548357 RAB34Q9BZG1 259 aa16.63■□□□□ 0.25
SNX29P1-201ENST00000548357 KCNH3Q9ULD8 1083 aa16.63■□□□□ 0.25
SNX29P1-201ENST00000548357 INSL5Q9Y5Q6 135 aa16.63■□□□□ 0.25
SNX29P1-201ENST00000548357 ATG2BQ96BY7 2078 aa16.63■□□□□ 0.25
SNX29P1-201ENST00000548357 OR4Q2P0C623 313 aa16.62■□□□□ 0.25
SNX29P1-201ENST00000548357 PLA2G4BP0C869 781 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms