RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 ADAM28Q9UKQ2 775 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 CTNND2Q9UQB3 1225 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 PRG3Q9Y2Y8 225 aaPredicted RBP12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 TRIM49BA6NDI0 452 aa12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 RFXAPO00287 272 aa12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 CETN3O15182 167 aa12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 KIF4AO95239 1232 aa12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 PSMC2P35998 433 aaKnown RBP12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 CASP4P49662 377 aa12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 CLCNKBP51801 687 aa12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 PMS1P54277 932 aaKnown RBP12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 WNT7BP56706 349 aa12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 FKBP3Q00688 224 aaKnown RBP12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 ENPEPQ07075 957 aa12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 SKOR2Q2VWA4 1001 aaPredicted RBP12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 CEP135Q66GS9 1140 aa12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 KLHL10Q6JEL2 608 aa12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 PDE12Q6L8Q7 609 aaKnown RBP12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 DCLRE1AQ6PJP8 1040 aa12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 USP37Q86T82 979 aa12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 WDR49Q8IV35 697 aa12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 ZC3H3Q8IXZ2 948 aaKnown RBP12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 BCL7CQ8WUZ0 217 aaPredicted RBP12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 POF1BQ8WVV4 589 aa12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 MRPL38Q96DV4 380 aaKnown RBP12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 FNBP1Q96RU3 617 aa12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 CDX2Q99626 313 aaPredicted RBP12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 TLR9Q9NR96 1032 aa12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 CACNG4Q9UBN1 327 aa12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 SF3B1O75533 1304 aaKnown RBP eCLIP12.32□□□□□ -0.44
CALCOCO1-208ENST00000547988 REV3LO60673 3130 aa12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 PODXLO00592 558 aa12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 SLC16A3O15427 465 aaKnown RBP12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 TADA2AO75478 443 aa12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 B3GAT3O94766 335 aa12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 EFEMP2O95967 443 aa12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 TMEM191BP0C7N4 346 aa12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 EPB41P11171 864 aaKnown RBP12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 PAX3P23760 479 aa12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 TFAMQ00059 246 aaKnown RBP12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 ELAVL2Q12926 359 aaKnown RBP12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 BMS1Q14692 1282 aaKnown RBP12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 DPCR1Q3MIW9 517 aa12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 CT47A1Q5JQC4 288 aaPredicted RBP12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 TTI2Q6NXR4 508 aa12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 CAVIN1Q6NZI2 390 aaKnown RBP12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 SASS6Q6UVJ0 657 aa12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 INTS8Q75QN2 995 aaKnown RBP12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 FAM186BQ8IYM0 893 aa12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 RNF168Q8IYW5 571 aaPredicted RBP12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 TMC2Q8TDI7 906 aa12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 PARD3BQ8TEW8 1205 aa12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 MYLIPQ8WY64 445 aa12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 CCDC127Q96BQ5 260 aa12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 ANKRD36BP1Q96IX9 119 aa12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 CEP63Q96MT8 703 aa12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 CGRRF1Q99675 332 aa12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 INTS13Q9NVM9 706 aa12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 DPP3Q9NY33 737 aa12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 RWDD2AQ9UIY3 292 aa12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 ITGA11Q9UKX5 1188 aa12.31□□□□□ -0.44
CALCOCO1-208ENST00000547988 ANO9A1A5B4 782 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 F8W810 466 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 TRAPPC3O43617 180 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 AKAP3O75969 853 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 TNNC2P02585 160 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 SOD2P04179 222 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 DLATP10515 647 aaKnown RBP12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 KRT13P13646 458 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 FOSL2P15408 326 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 TNNI1P19237 187 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 IGFBP4P22692 258 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 DNAJB1P25685 340 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 AP3M2P53677 418 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 CLDN10P78369 228 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 BFSP1Q12934 665 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 CAMK1Q14012 370 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 ADGRE1Q14246 886 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 DUOXA2Q1HG44 320 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 TIGD5Q53EQ6 642 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 C9orf57Q5W0N0 161 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 FUT10Q6P4F1 479 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 VPS52Q8N1B4 723 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 C3orf58Q8NDZ4 430 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 RABGGTAQ92696 567 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 DUSP9Q99956 384 aaKnown RBP12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 HERC2P3Q9BVR0 1158 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 VN1R3Q9BXE9 311 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 MTMR12Q9C0I1 747 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 ZBP1Q9H171 429 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 NGRNQ9NPE2 291 aaKnown RBP12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 ENTPD7Q9NQZ7 604 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 SSX2IPQ9Y2D8 614 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 MTCH2Q9Y6C9 303 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 PTPRJQ12913 1337 aa12.3□□□□□ -0.44
CALCOCO1-208ENST00000547988 MYH10P35580 1976 aa12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 TULP1O00294 542 aaPredicted RBP12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 PIRO00625 290 aa12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 IKBKBO14920 756 aa12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 FSCN2O14926 492 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms